RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.42□□□□□ -1.38
HNRNPC-208ENST00000553753 NDUFA1O15239 70 aa6.42□□□□□ -1.38
HNRNPC-208ENST00000553753 RNF151Q2KHN1 245 aa6.42□□□□□ -1.38
HNRNPC-208ENST00000553753 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 KRTAP29-1A8MX34 341 aaPredicted RBP6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 J3QL48 77 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 PYY3Q5JQD4 70 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 FAM19A3Q7Z5A8 133 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 LINC01561Q8N1V8 128 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 SCGB3A1Q96QR1 104 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 TRAPPC1Q9Y5R8 145 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 HNRNPA3P51991 378 aaKnown RBP6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 SEC11AP67812 179 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 RPL18AQ02543 176 aaKnown RBP6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 KIAA0087Q14695 138 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 UNQ6190/PRO20217Q6UXQ8 127 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 CHTOPQ9Y3Y2 248 aaKnown RBP6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 PKHD1L1Q86WI1 4243 aa6.41□□□□□ -1.38
HNRNPC-208ENST00000553753 HERVK_113P63121 156 aa6.4□□□□□ -1.38
HNRNPC-208ENST00000553753 FAT3Q8TDW7 4589 aa6.39□□□□□ -1.39
HNRNPC-208ENST00000553753 GEMIN7Q9H840 131 aaKnown RBP6.39□□□□□ -1.39
HNRNPC-208ENST00000553753 C6orf48Q9UBA6 75 aa6.39□□□□□ -1.39
HNRNPC-208ENST00000553753 S100A2P29034 98 aa6.39□□□□□ -1.39
HNRNPC-208ENST00000553753 C18orf32Q8TCD1 76 aa6.39□□□□□ -1.39
HNRNPC-208ENST00000553753 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
HNRNPC-208ENST00000553753 CDKN2A-AS1Q9UH64 79 aa6.39□□□□□ -1.39
HNRNPC-208ENST00000553753 A0A1W2PNN7 141 aa6.38□□□□□ -1.39
HNRNPC-208ENST00000553753 OXTP01178 125 aa6.38□□□□□ -1.39
HNRNPC-208ENST00000553753 PRSS2P07478 247 aa6.38□□□□□ -1.39
HNRNPC-208ENST00000553753 TLX1NBP0CAT3 122 aa6.38□□□□□ -1.39
HNRNPC-208ENST00000553753 C9orf116Q5BN46 136 aaPredicted RBP6.38□□□□□ -1.39
HNRNPC-208ENST00000553753 C2orf82Q6UX34 121 aa6.38□□□□□ -1.39
HNRNPC-208ENST00000553753 Q6ZRP5 223 aa6.38□□□□□ -1.39
HNRNPC-208ENST00000553753 PACRGQ96M98 296 aaPredicted RBP6.38□□□□□ -1.39
HNRNPC-208ENST00000553753 TRBV30A0A0K0K1B3 111 aa6.37□□□□□ -1.39
HNRNPC-208ENST00000553753 C6orf226Q5I0X4 101 aa6.37□□□□□ -1.39
HNRNPC-208ENST00000553753 CST9LQ9H4G1 147 aa6.37□□□□□ -1.39
HNRNPC-208ENST00000553753 TOMM7Q9P0U1 55 aa6.37□□□□□ -1.39
HNRNPC-208ENST00000553753 TINCRA0A1B0GVN0 87 aa6.36□□□□□ -1.39
HNRNPC-208ENST00000553753 CKS1BP61024 79 aa6.36□□□□□ -1.39
HNRNPC-208ENST00000553753 PRR3P79522 188 aaKnown RBP6.36□□□□□ -1.39
HNRNPC-208ENST00000553753 PMVKQ15126 192 aa6.36□□□□□ -1.39
HNRNPC-208ENST00000553753 Q8IZM0 81 aa6.36□□□□□ -1.39
HNRNPC-208ENST00000553753 URB1-AS1Q96HZ7 61 aa6.36□□□□□ -1.39
HNRNPC-208ENST00000553753 YPEL4Q96NS1 127 aa6.36□□□□□ -1.39
HNRNPC-208ENST00000553753 A0A096LNJ9 63 aa6.35□□□□□ -1.39
HNRNPC-208ENST00000553753 NDUFC2-KCTD14E9PQ53 114 aa6.35□□□□□ -1.39
HNRNPC-208ENST00000553753 DLEU1O43261 78 aa6.35□□□□□ -1.39
HNRNPC-208ENST00000553753 C21orf62-AS1Q17RA5 79 aa6.35□□□□□ -1.39
HNRNPC-208ENST00000553753 GAGE2EQ4V326 116 aa6.35□□□□□ -1.39
HNRNPC-208ENST00000553753 GAGE2DQ9UEU5 116 aa6.35□□□□□ -1.39
HNRNPC-208ENST00000553753 IGLV5-45A0A087WSX0 123 aa6.34□□□□□ -1.39
HNRNPC-208ENST00000553753 HBDP02042 147 aa6.34□□□□□ -1.39
HNRNPC-208ENST00000553753 FAM168BA1KXE4 195 aa6.34□□□□□ -1.4
HNRNPC-208ENST00000553753 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.4
HNRNPC-208ENST00000553753 PMCHL1Q16048 86 aa6.34□□□□□ -1.4
HNRNPC-208ENST00000553753 F8VRH5 84 aa6.33□□□□□ -1.4
HNRNPC-208ENST00000553753 PDZD11Q5EBL8 140 aa6.33□□□□□ -1.4
HNRNPC-208ENST00000553753 PHF5AQ7RTV0 110 aaKnown RBP6.33□□□□□ -1.4
HNRNPC-208ENST00000553753 CXCL5P42830 114 aa6.32□□□□□ -1.4
HNRNPC-208ENST00000553753 NDUFA6P56556 154 aa6.32□□□□□ -1.4
HNRNPC-208ENST00000553753 JOSD1Q15040 202 aaPredicted RBP6.32□□□□□ -1.4
HNRNPC-208ENST00000553753 ATP5LO75964 103 aa6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 FAM19A5Q7Z5A7 132 aaPredicted RBP6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 HIST3H2BBQ8N257 126 aa6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 COX7B2Q8TF08 81 aa6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 PSORS1C2Q9UIG4 136 aa6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 HSBP1L1C9JCN9 74 aa6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 H3BRM9 83 aa6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 IGLC3P0DOY3 106 aa6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 C9orf129Q5T035 196 aaKnown RBP6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 CHCHD1Q96BP2 118 aaKnown RBP6.31□□□□□ -1.4
HNRNPC-208ENST00000553753 M0R143 59 aa6.3□□□□□ -1.4
HNRNPC-208ENST00000553753 SRSF9Q13242 221 aaKnown RBP eCLIP6.3□□□□□ -1.44e-16■■■□□ 16.3
HNRNPC-208ENST00000553753 KRTAP7-1Q8IUC3 87 aa6.3□□□□□ -1.4
HNRNPC-208ENST00000553753 BAGE3Q86Y29 109 aa6.29□□□□□ -1.4
HNRNPC-208ENST00000553753 M0QXV9 152 aa6.29□□□□□ -1.4
HNRNPC-208ENST00000553753 TRGC2P03986 189 aa6.29□□□□□ -1.4
HNRNPC-208ENST00000553753 MT1HL1P0DM35 61 aa6.29□□□□□ -1.4
HNRNPC-208ENST00000553753 C1orf137Q5JT78 98 aa6.29□□□□□ -1.4
HNRNPC-208ENST00000553753 XAGE1AQ9HD64 81 aa6.29□□□□□ -1.4
HNRNPC-208ENST00000553753 TNXBP22105 4242 aa6.28□□□□□ -1.4
HNRNPC-208ENST00000553753 ZNF22P17026 224 aaPredicted RBP6.28□□□□□ -1.4
HNRNPC-208ENST00000553753 COA6Q5JTJ3 125 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-208ENST00000553753 IGLV5-39A0A0G2JS06 123 aa6.27□□□□□ -1.41
HNRNPC-208ENST00000553753 SERTAD4-AS1Q5TG53 156 aa6.27□□□□□ -1.41
HNRNPC-208ENST00000553753 KRTAP11-1Q8IUC1 163 aa6.27□□□□□ -1.41
HNRNPC-208ENST00000553753 SNHG12Q9BXW3 62 aa6.27□□□□□ -1.41
HNRNPC-208ENST00000553753 C11orf86A6NJI1 115 aa6.26□□□□□ -1.41
HNRNPC-208ENST00000553753 HIST1H2BKO60814 126 aa6.26□□□□□ -1.41
HNRNPC-208ENST00000553753 HSBP1O75506 76 aa6.26□□□□□ -1.41
HNRNPC-208ENST00000553753 HIST1H2BJP06899 126 aa6.26□□□□□ -1.41
HNRNPC-208ENST00000553753 HIST1H2BOP23527 126 aa6.26□□□□□ -1.41
HNRNPC-208ENST00000553753 HIST1H2BBP33778 126 aa6.26□□□□□ -1.41
HNRNPC-208ENST00000553753 HIST1H2BDP58876 126 aa6.26□□□□□ -1.41
HNRNPC-208ENST00000553753 HIST1H2BCP62807 126 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms