RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 BIRC6Q9NR09 4857 aa11.64□□□□□ -0.55
PSEN1-208ENST00000553719 CXCL5P42830 114 aa11.64□□□□□ -0.55
PSEN1-208ENST00000553719 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.63□□□□□ -0.55
PSEN1-208ENST00000553719 NDUFA1O15239 70 aa11.63□□□□□ -0.55
PSEN1-208ENST00000553719 PRSS2P07478 247 aa11.63□□□□□ -0.55
PSEN1-208ENST00000553719 AKR1D1P51857 326 aa11.63□□□□□ -0.55
PSEN1-208ENST00000553719 C6orf226Q5I0X4 101 aa11.63□□□□□ -0.55
PSEN1-208ENST00000553719 UNQ6190/PRO20217Q6UXQ8 127 aa11.63□□□□□ -0.55
PSEN1-208ENST00000553719 TSPEAR-AS2P59090 65 aa11.62□□□□□ -0.55
PSEN1-208ENST00000553719 RNF151Q2KHN1 245 aa11.62□□□□□ -0.55
PSEN1-208ENST00000553719 C6orf48Q9UBA6 75 aa11.62□□□□□ -0.55
PSEN1-208ENST00000553719 E9PLD3 99 aa11.61□□□□□ -0.55
PSEN1-208ENST00000553719 SCGB1D1O95968 90 aa11.61□□□□□ -0.55
PSEN1-208ENST00000553719 HERVK_113P61574 105 aa11.61□□□□□ -0.55
PSEN1-208ENST00000553719 LINC01620Q4KN68 170 aa11.61□□□□□ -0.55
PSEN1-208ENST00000553719 ATOH7Q8N100 152 aa11.61□□□□□ -0.55
PSEN1-208ENST00000553719 STPG4Q8N801 248 aa11.61□□□□□ -0.55
PSEN1-208ENST00000553719 ZNF625Q96I27 306 aaPredicted RBP11.61□□□□□ -0.55
PSEN1-208ENST00000553719 TRBV30A0A0K0K1B3 111 aa11.6□□□□□ -0.55
PSEN1-208ENST00000553719 LEPROTO15243 131 aa11.6□□□□□ -0.55
PSEN1-208ENST00000553719 GCSHP23434 173 aa11.6□□□□□ -0.55
PSEN1-208ENST00000553719 KRTAP10-1P60331 282 aa11.6□□□□□ -0.55
PSEN1-208ENST00000553719 CKS1BP61024 79 aa11.6□□□□□ -0.55
PSEN1-208ENST00000553719 C16orf90A8MZG2 172 aa11.59□□□□□ -0.55
PSEN1-208ENST00000553719 SDIM1Q6ZPB5 146 aa11.59□□□□□ -0.55
PSEN1-208ENST00000553719 JOSD1Q15040 202 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-208ENST00000553719 PLEKHB2Q96CS7 222 aa11.58□□□□□ -0.56
PSEN1-208ENST00000553719 RYR1P21817 5038 aa11.57□□□□□ -0.56
PSEN1-208ENST00000553719 IGKV2D-26A0A0A0MRZ7 120 aa11.57□□□□□ -0.56
PSEN1-208ENST00000553719 J3QQQ9 107 aa11.57□□□□□ -0.56
PSEN1-208ENST00000553719 ANKRD39Q53RE8 183 aa11.57□□□□□ -0.56
PSEN1-208ENST00000553719 TLX1NBP0CAT3 122 aa11.56□□□□□ -0.56
PSEN1-208ENST00000553719 MAJINQ3KP22 176 aa11.56□□□□□ -0.56
PSEN1-208ENST00000553719 SFTA2Q6UW10 78 aa11.56□□□□□ -0.56
PSEN1-208ENST00000553719 Q6ZSA8 131 aa11.56□□□□□ -0.56
PSEN1-208ENST00000553719 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-208ENST00000553719 PYY3Q5JQD4 70 aa11.54□□□□□ -0.56
PSEN1-208ENST00000553719 NDUFA12Q9UI09 145 aa11.54□□□□□ -0.56
PSEN1-208ENST00000553719 NMUP48645 174 aa11.53□□□□□ -0.56
PSEN1-208ENST00000553719 CIRBPQ14011 172 aaKnown RBP11.53□□□□□ -0.56
PSEN1-208ENST00000553719 HSPG2P98160 4391 aa11.53□□□□□ -0.56
PSEN1-208ENST00000553719 KIAA1109Q2LD37 5005 aa11.52□□□□□ -0.56
PSEN1-208ENST00000553719 A0A096LNI7 61 aa11.52□□□□□ -0.57
PSEN1-208ENST00000553719 LOC107984640A0A0U1RRK4 108 aa11.52□□□□□ -0.57
PSEN1-208ENST00000553719 HSBP1L1C9JCN9 74 aa11.52□□□□□ -0.57
PSEN1-208ENST00000553719 NDUFC2-KCTD14E9PQ53 114 aa11.52□□□□□ -0.57
PSEN1-208ENST00000553719 PANO1I0J062 215 aa11.52□□□□□ -0.57
PSEN1-208ENST00000553719 FAM30AQ9NZY2 134 aa11.52□□□□□ -0.57
PSEN1-208ENST00000553719 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
PSEN1-208ENST00000553719 Q6ZRP5 223 aa11.51□□□□□ -0.57
PSEN1-208ENST00000553719 PKIGQ9Y2B9 76 aa11.51□□□□□ -0.57
PSEN1-208ENST00000553719 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-208ENST00000553719 MYMXA0A1B0GTQ4 84 aa11.5□□□□□ -0.57
PSEN1-208ENST00000553719 PTTG1IPP53801 180 aa11.5□□□□□ -0.57
PSEN1-208ENST00000553719 HERV-K104P63124 156 aa11.5□□□□□ -0.57
PSEN1-208ENST00000553719 CHTF8P0CG12 524 aa11.49□□□□□ -0.57
PSEN1-208ENST00000553719 SPACA4Q8TDM5 124 aa11.49□□□□□ -0.57
PSEN1-208ENST00000553719 TTTY13Q9BZ97 58 aa11.49□□□□□ -0.57
PSEN1-208ENST00000553719 ERG28Q9UKR5 140 aa11.49□□□□□ -0.57
PSEN1-208ENST00000553719 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
PSEN1-208ENST00000553719 COX17Q14061 63 aa11.48□□□□□ -0.57
PSEN1-208ENST00000553719 LOC105371267A0A1B0GV96 52 aa11.47□□□□□ -0.57
PSEN1-208ENST00000553719 FAT1Q14517 4588 aa11.46□□□□□ -0.57
PSEN1-208ENST00000553719 PCP2Q8IVA1 136 aa11.46□□□□□ -0.57
PSEN1-208ENST00000553719 IGKV2-24A0A0C4DH68 120 aa11.45□□□□□ -0.58
PSEN1-208ENST00000553719 A0A0J9YXY3 114 aa11.45□□□□□ -0.58
PSEN1-208ENST00000553719 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
PSEN1-208ENST00000553719 ZNF815PA8K554 130 aa11.44□□□□□ -0.58
PSEN1-208ENST00000553719 EPM2AB3EWF7 344 aa11.44□□□□□ -0.58
PSEN1-208ENST00000553719 PFN2P35080 140 aa11.44□□□□□ -0.58
PSEN1-208ENST00000553719 XGP55808 180 aa11.44□□□□□ -0.58
PSEN1-208ENST00000553719 C9orf129Q5T035 196 aaKnown RBP11.44□□□□□ -0.58
PSEN1-208ENST00000553719 LINC00474Q9P2X8 69 aa11.44□□□□□ -0.58
PSEN1-208ENST00000553719 SMIM13P0DJ93 91 aa11.43□□□□□ -0.58
PSEN1-208ENST00000553719 GAGE2EQ4V326 116 aa11.43□□□□□ -0.58
PSEN1-208ENST00000553719 VAMP8Q9BV40 100 aa11.43□□□□□ -0.58
PSEN1-208ENST00000553719 GAGE2DQ9UEU5 116 aa11.43□□□□□ -0.58
PSEN1-208ENST00000553719 CDK2AP2O75956 126 aa11.42□□□□□ -0.58
PSEN1-208ENST00000553719 MEIG1Q5JSS6 88 aa11.42□□□□□ -0.58
PSEN1-208ENST00000553719 SCXQ7RTU7 201 aa11.42□□□□□ -0.58
PSEN1-208ENST00000553719 LITAFQ99732 161 aa11.42□□□□□ -0.58
PSEN1-208ENST00000553719 LINC00587B1AMM8 73 aa11.41□□□□□ -0.58
PSEN1-208ENST00000553719 KRTAP7-1Q8IUC3 87 aa11.41□□□□□ -0.58
PSEN1-208ENST00000553719 CIRBP-AS1Q8TBR5 109 aa11.41□□□□□ -0.58
PSEN1-208ENST00000553719 XAGE1AQ9HD64 81 aa11.41□□□□□ -0.58
PSEN1-208ENST00000553719 PLAC8Q9NZF1 115 aa11.41□□□□□ -0.58
PSEN1-208ENST00000553719 PAM16Q9Y3D7 125 aa11.41□□□□□ -0.58
PSEN1-208ENST00000553719 HERC2O95714 4834 aa11.4□□□□□ -0.58
PSEN1-208ENST00000553719 A0A087WYN8 130 aa11.4□□□□□ -0.58
PSEN1-208ENST00000553719 SPATA45Q537H7 98 aa11.4□□□□□ -0.58
PSEN1-208ENST00000553719 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
PSEN1-208ENST00000553719 A0A0U1RRA0 63 aa11.39□□□□□ -0.59
PSEN1-208ENST00000553719 TIMM17BO60830 172 aa11.39□□□□□ -0.59
PSEN1-208ENST00000553719 LINC00158P58513 81 aa11.39□□□□□ -0.59
PSEN1-208ENST00000553719 BOD1L2Q8IYS8 172 aa11.39□□□□□ -0.59
PSEN1-208ENST00000553719 MIR7-3HGQ8N6C7 128 aa11.39□□□□□ -0.59
PSEN1-208ENST00000553719 A0A1W2PNN7 141 aa11.38□□□□□ -0.59
PSEN1-208ENST00000553719 COX8AP10176 69 aa11.38□□□□□ -0.59
PSEN1-208ENST00000553719 HAMPP81172 84 aa11.38□□□□□ -0.59
PSEN1-208ENST00000553719 ADAMTSL4-AS1Q5T5F5 129 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms