RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 CKS1BP61024 79 aa8.19□□□□□ -1.1
NEDD1-205ENST00000553609 ADIRFQ15847 76 aa8.19□□□□□ -1.1
NEDD1-205ENST00000553609 Q6ZN92 141 aa8.19□□□□□ -1.1
NEDD1-205ENST00000553609 LINC00167Q96N53 147 aa8.19□□□□□ -1.1
NEDD1-205ENST00000553609 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.18□□□□□ -1.1
NEDD1-205ENST00000553609 C9JQL5 133 aa8.18□□□□□ -1.1
NEDD1-205ENST00000553609 F8W036 122 aa8.18□□□□□ -1.1
NEDD1-205ENST00000553609 PRSS2P07478 247 aa8.18□□□□□ -1.1
NEDD1-205ENST00000553609 RAB5AP20339 215 aa8.18□□□□□ -1.1
NEDD1-205ENST00000553609 FAM229BQ4G0N7 80 aa8.18□□□□□ -1.1
NEDD1-205ENST00000553609 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
NEDD1-205ENST00000553609 FAM19A3Q7Z5A8 133 aa8.18□□□□□ -1.1
NEDD1-205ENST00000553609 LINC00304Q8N9R0 145 aa8.18□□□□□ -1.1
NEDD1-205ENST00000553609 IGLV7-46A0A075B6I9 117 aa8.17□□□□□ -1.1
NEDD1-205ENST00000553609 RPL37AP8A6NKH3 93 aa8.17□□□□□ -1.1
NEDD1-205ENST00000553609 PRSS47A8MTI9 375 aa8.17□□□□□ -1.1
NEDD1-205ENST00000553609 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
NEDD1-205ENST00000553609 F8VRH5 84 aa8.16□□□□□ -1.1
NEDD1-205ENST00000553609 S100A8P05109 93 aa8.16□□□□□ -1.1
NEDD1-205ENST00000553609 C2orf66Q6UXQ4 117 aa8.16□□□□□ -1.1
NEDD1-205ENST00000553609 TMEM136Q6ZRR5 245 aa8.16□□□□□ -1.1
NEDD1-205ENST00000553609 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
NEDD1-205ENST00000553609 C2orf88Q9BSF0 95 aa8.16□□□□□ -1.1
NEDD1-205ENST00000553609 ALKBH7Q9BT30 221 aaPredicted RBP8.16□□□□□ -1.1
NEDD1-205ENST00000553609 NAT8Q9UHE5 227 aa8.16□□□□□ -1.1
NEDD1-205ENST00000553609 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
NEDD1-205ENST00000553609 IGLV5-37A0A075B6J1 123 aa8.14□□□□□ -1.11
NEDD1-205ENST00000553609 GAGE10A6NGK3 116 aa8.14□□□□□ -1.11
NEDD1-205ENST00000553609 IGIPA6NJ69 53 aa8.14□□□□□ -1.11
NEDD1-205ENST00000553609 CYSLTR1Q9Y271 337 aa8.14□□□□□ -1.11
NEDD1-205ENST00000553609 CTAG1AP78358 180 aa8.13□□□□□ -1.11
NEDD1-205ENST00000553609 VCX2Q9H322 139 aa8.13□□□□□ -1.11
NEDD1-205ENST00000553609 LOC389332A0A1B0GUA5 103 aa8.12□□□□□ -1.11
NEDD1-205ENST00000553609 NPSP0C0P6 89 aa8.12□□□□□ -1.11
NEDD1-205ENST00000553609 PNRC1Q12796 327 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-205ENST00000553609 PPDPFQ9H3Y8 114 aa8.12□□□□□ -1.11
NEDD1-205ENST00000553609 CXCL5P42830 114 aa8.11□□□□□ -1.11
NEDD1-205ENST00000553609 UBE2AP49459 152 aa8.11□□□□□ -1.11
NEDD1-205ENST00000553609 HERVK_113P63121 156 aa8.11□□□□□ -1.11
NEDD1-205ENST00000553609 SRSF3P84103 164 aaKnown RBP8.11□□□□□ -1.11
NEDD1-205ENST00000553609 ATP5L2Q7Z4Y8 100 aa8.11□□□□□ -1.11
NEDD1-205ENST00000553609 SMIM1B2RUZ4 78 aa8.1□□□□□ -1.11
NEDD1-205ENST00000553609 Q8N8P6 123 aa8.1□□□□□ -1.11
NEDD1-205ENST00000553609 KRTAP4-1Q9BYQ7 146 aa8.1□□□□□ -1.11
NEDD1-205ENST00000553609 MAP1LC3AQ9H492 121 aa8.1□□□□□ -1.11
NEDD1-205ENST00000553609 LAMTOR2Q9Y2Q5 125 aa8.1□□□□□ -1.11
NEDD1-205ENST00000553609 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
NEDD1-205ENST00000553609 SCO1O75880 301 aa8.09□□□□□ -1.11
NEDD1-205ENST00000553609 SEC11AP67812 179 aa8.08□□□□□ -1.12
NEDD1-205ENST00000553609 PRLHP81277 87 aa8.08□□□□□ -1.12
NEDD1-205ENST00000553609 ORMDL2Q53FV1 153 aa8.08□□□□□ -1.12
NEDD1-205ENST00000553609 AKAP14Q86UN6 197 aa8.08□□□□□ -1.12
NEDD1-205ENST00000553609 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
NEDD1-205ENST00000553609 FSIP2Q5CZC0 6907 aa8.08□□□□□ -1.12
NEDD1-205ENST00000553609 IGKV2-28A0A075B6P5 120 aa8.07□□□□□ -1.12
NEDD1-205ENST00000553609 IGKV2D-28P01615 120 aa8.07□□□□□ -1.12
NEDD1-205ENST00000553609 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
NEDD1-205ENST00000553609 GEMIN7Q9H840 131 aaKnown RBP8.07□□□□□ -1.12
NEDD1-205ENST00000553609 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
NEDD1-205ENST00000553609 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
NEDD1-205ENST00000553609 COX7B2Q8TF08 81 aa8.06□□□□□ -1.12
NEDD1-205ENST00000553609 TIMM17AQ99595 171 aa8.06□□□□□ -1.12
NEDD1-205ENST00000553609 IGLV5-45A0A087WSX0 123 aa8.05□□□□□ -1.12
NEDD1-205ENST00000553609 K7EMI3 77 aa8.05□□□□□ -1.12
NEDD1-205ENST00000553609 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
NEDD1-205ENST00000553609 PDZD11Q5EBL8 140 aa8.05□□□□□ -1.12
NEDD1-205ENST00000553609 TMEM238C9JI98 176 aa8.04□□□□□ -1.12
NEDD1-205ENST00000553609 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
NEDD1-205ENST00000553609 PLEKHB2Q96CS7 222 aa8.04□□□□□ -1.12
NEDD1-205ENST00000553609 TMEM126AQ9H061 195 aa8.04□□□□□ -1.12
NEDD1-205ENST00000553609 LINC01547P58512 204 aaPredicted RBP8.03□□□□□ -1.12
NEDD1-205ENST00000553609 RAB5BP61020 215 aa8.03□□□□□ -1.12
NEDD1-205ENST00000553609 PAPPA-AS1Q5QFB9 102 aa8.03□□□□□ -1.12
NEDD1-205ENST00000553609 TOMM6Q96B49 74 aa8.03□□□□□ -1.12
NEDD1-205ENST00000553609 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
NEDD1-205ENST00000553609 M0R378 163 aa8.02□□□□□ -1.13
NEDD1-205ENST00000553609 VPREB1P12018 145 aa8.02□□□□□ -1.13
NEDD1-205ENST00000553609 PEA15Q15121 130 aa8.02□□□□□ -1.13
NEDD1-205ENST00000553609 LCE3BQ5TA77 95 aa8.02□□□□□ -1.13
NEDD1-205ENST00000553609 FAM19A1Q7Z5A9 133 aa8.02□□□□□ -1.13
NEDD1-205ENST00000553609 NXT2Q9NPJ8 142 aaKnown RBP8.02□□□□□ -1.13
NEDD1-205ENST00000553609 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
NEDD1-205ENST00000553609 Q8NDZ9 215 aa8.01□□□□□ -1.13
NEDD1-205ENST00000553609 SPINK8P0C7L1 97 aa8□□□□□ -1.13
NEDD1-205ENST00000553609 ADCYAP1P18509 176 aa8□□□□□ -1.13
NEDD1-205ENST00000553609 ERASQ7Z444 233 aa8□□□□□ -1.13
NEDD1-205ENST00000553609 KRTAP4-12Q9BQ66 201 aa8□□□□□ -1.13
NEDD1-205ENST00000553609 hCG_2014768A0A024R1R8 64 aa7.98□□□□□ -1.13
NEDD1-205ENST00000553609 CBLN2Q8IUK8 224 aa7.98□□□□□ -1.13
NEDD1-205ENST00000553609 SPRR4Q96PI1 79 aa7.98□□□□□ -1.13
NEDD1-205ENST00000553609 LINC00337Q8N6G1 96 aa7.97□□□□□ -1.13
NEDD1-205ENST00000553609 SCGB3A1Q96QR1 104 aa7.97□□□□□ -1.13
NEDD1-205ENST00000553609 CST9LQ9H4G1 147 aa7.97□□□□□ -1.13
NEDD1-205ENST00000553609 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
NEDD1-205ENST00000553609 G0S2P27469 103 aa7.96□□□□□ -1.14
NEDD1-205ENST00000553609 PFN2P35080 140 aa7.96□□□□□ -1.14
NEDD1-205ENST00000553609 GNB1LQ9BYB4 327 aa7.96□□□□□ -1.14
NEDD1-205ENST00000553609 IGLV5-39A0A0G2JS06 123 aa7.95□□□□□ -1.14
NEDD1-205ENST00000553609 ATP5LO75964 103 aa7.95□□□□□ -1.14
NEDD1-205ENST00000553609 HIGD2AQ9BW72 106 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms