RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 RAB4AP20338 218 aa4.22□□□□□ -1.73
ATXN3-219ENST00000553488 TMEM241Q24JQ0 296 aa4.22□□□□□ -1.73
ATXN3-219ENST00000553488 FAM231DQ6ZW35 169 aa4.22□□□□□ -1.73
ATXN3-219ENST00000553488 NDUFC2-KCTD14E9PQ53 114 aa4.21□□□□□ -1.74
ATXN3-219ENST00000553488 H0Y8G0 127 aa4.21□□□□□ -1.74
ATXN3-219ENST00000553488 NUPR1O60356 82 aa4.21□□□□□ -1.74
ATXN3-219ENST00000553488 FCER1GP30273 86 aa4.21□□□□□ -1.74
ATXN3-219ENST00000553488 SMAGPQ0VAQ4 97 aa4.21□□□□□ -1.74
ATXN3-219ENST00000553488 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
ATXN3-219ENST00000553488 AMN1Q8IY45 258 aa4.21□□□□□ -1.74
ATXN3-219ENST00000553488 VCX2Q9H322 139 aa4.21□□□□□ -1.74
ATXN3-219ENST00000553488 TRBV30A0A0K0K1B3 111 aa4.2□□□□□ -1.74
ATXN3-219ENST00000553488 A8MWL6 223 aa4.2□□□□□ -1.74
ATXN3-219ENST00000553488 GATCO43716 136 aaKnown RBP4.2□□□□□ -1.74
ATXN3-219ENST00000553488 CRYGAP11844 174 aa4.2□□□□□ -1.74
ATXN3-219ENST00000553488 RPL39P62891 51 aaKnown RBP4.2□□□□□ -1.74
ATXN3-219ENST00000553488 C2orf82Q6UX34 121 aa4.2□□□□□ -1.74
ATXN3-219ENST00000553488 TYMSOSQ8TAI1 123 aa4.2□□□□□ -1.74
ATXN3-219ENST00000553488 PAM16Q9Y3D7 125 aa4.2□□□□□ -1.74
ATXN3-219ENST00000553488 A0A1B0GUT8 65 aa4.19□□□□□ -1.74
ATXN3-219ENST00000553488 HIGD1CA8MV81 97 aa4.19□□□□□ -1.74
ATXN3-219ENST00000553488 TEX46H3BTG2 121 aa4.19□□□□□ -1.74
ATXN3-219ENST00000553488 HERV-K104P63124 156 aa4.19□□□□□ -1.74
ATXN3-219ENST00000553488 MRPS36P82909 103 aaKnown RBP4.19□□□□□ -1.74
ATXN3-219ENST00000553488 ERASQ7Z444 233 aa4.19□□□□□ -1.74
ATXN3-219ENST00000553488 KIR2DL4Q99706 377 aa4.19□□□□□ -1.74
ATXN3-219ENST00000553488 CHTOPQ9Y3Y2 248 aaKnown RBP4.19□□□□□ -1.74
ATXN3-219ENST00000553488 IFITM10A6NMD0 228 aa4.18□□□□□ -1.74
ATXN3-219ENST00000553488 SCO1O75880 301 aa4.18□□□□□ -1.74
ATXN3-219ENST00000553488 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-219ENST00000553488 RPL32P62910 135 aaKnown RBP4.18□□□□□ -1.74
ATXN3-219ENST00000553488 LINC00242Q5T6M2 205 aa4.18□□□□□ -1.74
ATXN3-219ENST00000553488 KRTAP13-1Q8IUC0 172 aa4.18□□□□□ -1.74
ATXN3-219ENST00000553488 BORCS7Q96B45 105 aa4.18□□□□□ -1.74
ATXN3-219ENST00000553488 ALKBH7Q9BT30 221 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-219ENST00000553488 SPANXA1Q9NS26 97 aa4.18□□□□□ -1.74
ATXN3-219ENST00000553488 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
ATXN3-219ENST00000553488 C22orf24Q9Y442 160 aa4.18□□□□□ -1.74
ATXN3-219ENST00000553488 IGLV7-46A0A075B6I9 117 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 TGIF2-C20orf24A0A0A6YYL0 155 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 TMEM250H0YL14 139 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 PPP1R2P9O14990 202 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 BCE1O60756 84 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 PPP1R17O96001 155 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 MT3P25713 68 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 RPL28P46779 137 aaKnown RBP4.17□□□□□ -1.74
ATXN3-219ENST00000553488 HBBP68871 147 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 LINC00304Q8N9R0 145 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 KRTAP4-1Q9BYQ7 146 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 TP73-AS1Q9UF72 201 aa4.17□□□□□ -1.74
ATXN3-219ENST00000553488 TRBV24-1A0A075B6N3 115 aa4.16□□□□□ -1.74
ATXN3-219ENST00000553488 FAM229BQ4G0N7 80 aa4.16□□□□□ -1.74
ATXN3-219ENST00000553488 MRPL51Q4U2R6 128 aaKnown RBP4.16□□□□□ -1.74
ATXN3-219ENST00000553488 LINC00173Q6ZV60 143 aa4.16□□□□□ -1.74
ATXN3-219ENST00000553488 PACRGQ96M98 296 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-219ENST00000553488 C20orf78Q9BR46 151 aa4.16□□□□□ -1.74
ATXN3-219ENST00000553488 SMIM2Q9BVW6 85 aa4.16□□□□□ -1.74
ATXN3-219ENST00000553488 ZNF727A8MUV8 499 aa4.15□□□□□ -1.75
ATXN3-219ENST00000553488 PRSS2P07478 247 aa4.15□□□□□ -1.75
ATXN3-219ENST00000553488 CTAG1AP78358 180 aa4.15□□□□□ -1.75
ATXN3-219ENST00000553488 FAM104BQ5XKR9 115 aa4.15□□□□□ -1.75
ATXN3-219ENST00000553488 UQCC3Q6UW78 93 aa4.15□□□□□ -1.75
ATXN3-219ENST00000553488 MRPL55Q7Z7F7 128 aaKnown RBP4.15□□□□□ -1.75
ATXN3-219ENST00000553488 LINC01551Q86U37 167 aa4.15□□□□□ -1.75
ATXN3-219ENST00000553488 LINC00469Q8N7U9 141 aa4.15□□□□□ -1.75
ATXN3-219ENST00000553488 XAGE1AQ9HD64 81 aa4.15□□□□□ -1.75
ATXN3-219ENST00000553488 IGLV4-3A0A075B6K6 122 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 TCAPO15273 167 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 LINC01547P58512 204 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-219ENST00000553488 S100A12P80511 92 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 RIGQ13278 110 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 ASB16-AS1Q495Z4 193 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 ALKAL2Q6UX46 152 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 LINC00518Q8N0U6 118 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 LINC01561Q8N1V8 128 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 PPDPFQ9H3Y8 114 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 OSTCQ9NRP0 149 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 V9GYV3 84 aa4.14□□□□□ -1.75
ATXN3-219ENST00000553488 NPYP01303 97 aa4.13□□□□□ -1.75
ATXN3-219ENST00000553488 LINC00167Q96N53 147 aa4.13□□□□□ -1.75
ATXN3-219ENST00000553488 PYGO1Q9Y3Y4 419 aa4.13□□□□□ -1.75
ATXN3-219ENST00000553488 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-219ENST00000553488 RPL37AP8A6NKH3 93 aa4.12□□□□□ -1.75
ATXN3-219ENST00000553488 D6R8Y8 96 aa4.12□□□□□ -1.75
ATXN3-219ENST00000553488 APOC3P02656 99 aa4.12□□□□□ -1.75
ATXN3-219ENST00000553488 IFI27P40305 119 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-219ENST00000553488 KRTAP13-3Q3SY46 172 aa4.12□□□□□ -1.75
ATXN3-219ENST00000553488 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
ATXN3-219ENST00000553488 Q8IZM0 81 aa4.12□□□□□ -1.75
ATXN3-219ENST00000553488 SVBPQ8N300 66 aa4.12□□□□□ -1.75
ATXN3-219ENST00000553488 SMIM7Q9BQ49 75 aa4.12□□□□□ -1.75
ATXN3-219ENST00000553488 IGLV5-37A0A075B6J1 123 aa4.11□□□□□ -1.75
ATXN3-219ENST00000553488 SNAPINO95295 136 aa4.11□□□□□ -1.75
ATXN3-219ENST00000553488 CKS2P33552 79 aa4.11□□□□□ -1.75
ATXN3-219ENST00000553488 CEBPGP53567 150 aa4.11□□□□□ -1.75
ATXN3-219ENST00000553488 FAM74A3Q4VXF1 159 aa4.11□□□□□ -1.75
ATXN3-219ENST00000553488 ZC2HC1BQ5TFG8 222 aa4.11□□□□□ -1.75
ATXN3-219ENST00000553488 FP248Q71RG6 208 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-219ENST00000553488 FAM19A3Q7Z5A8 133 aa4.11□□□□□ -1.75
ATXN3-219ENST00000553488 TMEM141Q96I45 108 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms