RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PPBPP02775 128 aa5.23□□□□□ -1.57
SYNE2-209ENST00000553308 FAM229BQ4G0N7 80 aa5.23□□□□□ -1.57
SYNE2-209ENST00000553308 ALKBH7Q9BT30 221 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-209ENST00000553308 F8VRH5 84 aa5.22□□□□□ -1.57
SYNE2-209ENST00000553308 UBE2AP49459 152 aa5.22□□□□□ -1.57
SYNE2-209ENST00000553308 ORMDL3Q8N138 153 aa5.22□□□□□ -1.57
SYNE2-209ENST00000553308 PRELID3AQ96N28 172 aa5.22□□□□□ -1.57
SYNE2-209ENST00000553308 AMELXQ99217 191 aa5.22□□□□□ -1.57
SYNE2-209ENST00000553308 PPDPFQ9H3Y8 114 aa5.22□□□□□ -1.57
SYNE2-209ENST00000553308 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
SYNE2-209ENST00000553308 IGKV2D-26A0A0A0MRZ7 120 aa5.21□□□□□ -1.58
SYNE2-209ENST00000553308 LOC389332A0A1B0GUA5 103 aa5.21□□□□□ -1.58
SYNE2-209ENST00000553308 S100A8P05109 93 aa5.21□□□□□ -1.58
SYNE2-209ENST00000553308 C2orf66Q6UXQ4 117 aa5.21□□□□□ -1.58
SYNE2-209ENST00000553308 TMEM136Q6ZRR5 245 aa5.21□□□□□ -1.58
SYNE2-209ENST00000553308 CDKN2A-AS1Q9UH64 79 aa5.21□□□□□ -1.58
SYNE2-209ENST00000553308 CYSLTR1Q9Y271 337 aa5.21□□□□□ -1.58
SYNE2-209ENST00000553308 C9JQL5 133 aa5.2□□□□□ -1.58
SYNE2-209ENST00000553308 PNRC1Q12796 327 aaPredicted RBP5.2□□□□□ -1.58
SYNE2-209ENST00000553308 FAM19A3Q7Z5A8 133 aa5.2□□□□□ -1.58
SYNE2-209ENST00000553308 VCX2Q9H322 139 aa5.2□□□□□ -1.58
SYNE2-209ENST00000553308 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
SYNE2-209ENST00000553308 NAT8Q9UHE5 227 aa5.2□□□□□ -1.58
SYNE2-209ENST00000553308 IGLV5-37A0A075B6J1 123 aa5.19□□□□□ -1.58
SYNE2-209ENST00000553308 SCO1O75880 301 aa5.19□□□□□ -1.58
SYNE2-209ENST00000553308 CXCL5P42830 114 aa5.19□□□□□ -1.58
SYNE2-209ENST00000553308 HERVK_113P63121 156 aa5.19□□□□□ -1.58
SYNE2-209ENST00000553308 PRLHP81277 87 aa5.19□□□□□ -1.58
SYNE2-209ENST00000553308 C3orf22Q8N5N4 141 aa5.19□□□□□ -1.58
SYNE2-209ENST00000553308 MAP1LC3AQ9H492 121 aa5.19□□□□□ -1.58
SYNE2-209ENST00000553308 IGKV2-28A0A075B6P5 120 aa5.18□□□□□ -1.58
SYNE2-209ENST00000553308 IGIPA6NJ69 53 aa5.18□□□□□ -1.58
SYNE2-209ENST00000553308 PRSS47A8MTI9 375 aa5.18□□□□□ -1.58
SYNE2-209ENST00000553308 IGKV2D-28P01615 120 aa5.18□□□□□ -1.58
SYNE2-209ENST00000553308 LINC01547P58512 204 aaPredicted RBP5.18□□□□□ -1.58
SYNE2-209ENST00000553308 NKAPP1Q8N9T2 125 aa5.18□□□□□ -1.58
SYNE2-209ENST00000553308 KRTAP4-1Q9BYQ7 146 aa5.18□□□□□ -1.58
SYNE2-209ENST00000553308 GEMIN7Q9H840 131 aaKnown RBP5.18□□□□□ -1.58
SYNE2-209ENST00000553308 SMIM1B2RUZ4 78 aa5.17□□□□□ -1.58
SYNE2-209ENST00000553308 NPSP0C0P6 89 aa5.17□□□□□ -1.58
SYNE2-209ENST00000553308 SEC11AP67812 179 aa5.17□□□□□ -1.58
SYNE2-209ENST00000553308 CTAG1AP78358 180 aa5.17□□□□□ -1.58
SYNE2-209ENST00000553308 SRSF3P84103 164 aaKnown RBP5.17□□□□□ -1.58
SYNE2-209ENST00000553308 Q8N8P6 123 aa5.17□□□□□ -1.58
SYNE2-209ENST00000553308 RAB5BP61020 215 aa5.16□□□□□ -1.58
SYNE2-209ENST00000553308 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
SYNE2-209ENST00000553308 ORMDL2Q53FV1 153 aa5.16□□□□□ -1.58
SYNE2-209ENST00000553308 ATP5L2Q7Z4Y8 100 aa5.16□□□□□ -1.58
SYNE2-209ENST00000553308 FAM19A1Q7Z5A9 133 aa5.16□□□□□ -1.58
SYNE2-209ENST00000553308 COX7B2Q8TF08 81 aa5.16□□□□□ -1.58
SYNE2-209ENST00000553308 LAMTOR2Q9Y2Q5 125 aa5.16□□□□□ -1.58
SYNE2-209ENST00000553308 TMEM238C9JI98 176 aa5.15□□□□□ -1.59
SYNE2-209ENST00000553308 KRTAP13-3Q3SY46 172 aa5.15□□□□□ -1.59
SYNE2-209ENST00000553308 AKAP14Q86UN6 197 aa5.15□□□□□ -1.59
SYNE2-209ENST00000553308 TMEM126AQ9H061 195 aa5.15□□□□□ -1.59
SYNE2-209ENST00000553308 PDZD11Q5EBL8 140 aa5.14□□□□□ -1.59
SYNE2-209ENST00000553308 PAPPA-AS1Q5QFB9 102 aa5.14□□□□□ -1.59
SYNE2-209ENST00000553308 FP248Q71RG6 208 aaPredicted RBP5.14□□□□□ -1.59
SYNE2-209ENST00000553308 LINC00337Q8N6G1 96 aa5.14□□□□□ -1.59
SYNE2-209ENST00000553308 PLEKHB2Q96CS7 222 aa5.14□□□□□ -1.59
SYNE2-209ENST00000553308 M0R378 163 aa5.13□□□□□ -1.59
SYNE2-209ENST00000553308 SPINK8P0C7L1 97 aa5.13□□□□□ -1.59
SYNE2-209ENST00000553308 SPAG11AQ6PDA7 123 aa5.13□□□□□ -1.59
SYNE2-209ENST00000553308 TIMM17AQ99595 171 aa5.13□□□□□ -1.59
SYNE2-209ENST00000553308 IGLV5-45A0A087WSX0 123 aa5.12□□□□□ -1.59
SYNE2-209ENST00000553308 K7EMI3 77 aa5.12□□□□□ -1.59
SYNE2-209ENST00000553308 VPREB1P12018 145 aa5.12□□□□□ -1.59
SYNE2-209ENST00000553308 PEA15Q15121 130 aa5.12□□□□□ -1.59
SYNE2-209ENST00000553308 CBLN2Q8IUK8 224 aa5.12□□□□□ -1.59
SYNE2-209ENST00000553308 TOMM6Q96B49 74 aa5.12□□□□□ -1.59
SYNE2-209ENST00000553308 NXT2Q9NPJ8 142 aaKnown RBP5.12□□□□□ -1.59
SYNE2-209ENST00000553308 hCG_2014768A0A024R1R8 64 aa5.11□□□□□ -1.59
SYNE2-209ENST00000553308 TINCRA0A1B0GVN0 87 aa5.11□□□□□ -1.59
SYNE2-209ENST00000553308 ADCYAP1P18509 176 aa5.11□□□□□ -1.59
SYNE2-209ENST00000553308 PFN2P35080 140 aa5.11□□□□□ -1.59
SYNE2-209ENST00000553308 Q8NDZ9 215 aa5.11□□□□□ -1.59
SYNE2-209ENST00000553308 HIGD2AQ9BW72 106 aa5.11□□□□□ -1.59
SYNE2-209ENST00000553308 ATP5LO75964 103 aa5.1□□□□□ -1.59
SYNE2-209ENST00000553308 SEC61BP60468 96 aaKnown RBP5.1□□□□□ -1.59
SYNE2-209ENST00000553308 ERASQ7Z444 233 aa5.1□□□□□ -1.59
SYNE2-209ENST00000553308 DAND5Q8N907 189 aa5.1□□□□□ -1.59
SYNE2-209ENST00000553308 Q8NBF4 154 aa5.1□□□□□ -1.59
SYNE2-209ENST00000553308 SPRR4Q96PI1 79 aa5.1□□□□□ -1.59
SYNE2-209ENST00000553308 SCGB3A1Q96QR1 104 aa5.1□□□□□ -1.59
SYNE2-209ENST00000553308 SND1-IT1Q9HBX3 110 aa5.1□□□□□ -1.59
SYNE2-209ENST00000553308 FSIP2Q5CZC0 6907 aa5.09□□□□□ -1.59
SYNE2-209ENST00000553308 C4orf48Q5BLP8 95 aa5.09□□□□□ -1.59
SYNE2-209ENST00000553308 GNB1LQ9BYB4 327 aa5.09□□□□□ -1.59
SYNE2-209ENST00000553308 G0S2P27469 103 aa5.08□□□□□ -1.6
SYNE2-209ENST00000553308 RAB14P61106 215 aa5.08□□□□□ -1.6
SYNE2-209ENST00000553308 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
SYNE2-209ENST00000553308 CST9LQ9H4G1 147 aa5.08□□□□□ -1.6
SYNE2-209ENST00000553308 RPL24P83731 157 aaKnown RBP5.07□□□□□ -1.6
SYNE2-209ENST00000553308 KIAA1644Q3SXP7 199 aa5.07□□□□□ -1.6
SYNE2-209ENST00000553308 ERG28Q9UKR5 140 aa5.07□□□□□ -1.6
SYNE2-209ENST00000553308 IGLV5-39A0A0G2JS06 123 aa5.06□□□□□ -1.6
SYNE2-209ENST00000553308 H3BRM9 83 aa5.06□□□□□ -1.6
SYNE2-209ENST00000553308 ZNF625Q96I27 306 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-209ENST00000553308 MRPL18Q9H0U6 180 aaKnown RBP5.06□□□□□ -1.6
SYNE2-209ENST00000553308 ZNF706Q9Y5V0 76 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms