RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 Q6ZRP5 223 aa12.12□□□□□ -0.47
GPN3-210ENST00000552180 Q8IZM0 81 aa12.12□□□□□ -0.47
GPN3-210ENST00000552180 TRBV30A0A0K0K1B3 111 aa12.11□□□□□ -0.47
GPN3-210ENST00000552180 HBDP02042 147 aa12.11□□□□□ -0.47
GPN3-210ENST00000552180 PMCHL1Q16048 86 aa12.11□□□□□ -0.47
GPN3-210ENST00000552180 C9orf116Q5BN46 136 aaPredicted RBP12.1□□□□□ -0.47
GPN3-210ENST00000552180 LINC00469Q8N7U9 141 aa12.1□□□□□ -0.47
GPN3-210ENST00000552180 TOMM7Q9P0U1 55 aa12.1□□□□□ -0.47
GPN3-210ENST00000552180 SMIM1B2RUZ4 78 aa12.09□□□□□ -0.47
GPN3-210ENST00000552180 C6orf226Q5I0X4 101 aa12.09□□□□□ -0.47
GPN3-210ENST00000552180 PRSS2P07478 247 aa12.08□□□□□ -0.48
GPN3-210ENST00000552180 PACRGQ96M98 296 aaPredicted RBP12.08□□□□□ -0.48
GPN3-210ENST00000552180 PRR3P79522 188 aaKnown RBP12.07□□□□□ -0.48
GPN3-210ENST00000552180 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
GPN3-210ENST00000552180 IGLC3P0DOY3 106 aa12.06□□□□□ -0.48
GPN3-210ENST00000552180 CKS1BP61024 79 aa12.06□□□□□ -0.48
GPN3-210ENST00000552180 CHCHD1Q96BP2 118 aaKnown RBP12.06□□□□□ -0.48
GPN3-210ENST00000552180 TRGC2P03986 189 aa12.05□□□□□ -0.48
GPN3-210ENST00000552180 FAM168BA1KXE4 195 aa12.04□□□□□ -0.48
GPN3-210ENST00000552180 COLCA2A8K830 154 aa12.04□□□□□ -0.48
GPN3-210ENST00000552180 ATP5LO75964 103 aa12.04□□□□□ -0.48
GPN3-210ENST00000552180 OXTP01178 125 aa12.04□□□□□ -0.48
GPN3-210ENST00000552180 GAGE2EQ4V326 116 aa12.04□□□□□ -0.48
GPN3-210ENST00000552180 KRTAP7-1Q8IUC3 87 aa12.04□□□□□ -0.48
GPN3-210ENST00000552180 GAGE2DQ9UEU5 116 aa12.04□□□□□ -0.48
GPN3-210ENST00000552180 F8VRH5 84 aa12.03□□□□□ -0.48
GPN3-210ENST00000552180 SPINK8P0C7L1 97 aa12.03□□□□□ -0.48
GPN3-210ENST00000552180 NDUFA6P56556 154 aa12.03□□□□□ -0.48
GPN3-210ENST00000552180 J3QL48 77 aa12.02□□□□□ -0.49
GPN3-210ENST00000552180 C9orf129Q5T035 196 aaKnown RBP12.02□□□□□ -0.49
GPN3-210ENST00000552180 PHF5AQ7RTV0 110 aaKnown RBP12.02□□□□□ -0.49
GPN3-210ENST00000552180 COX7B2Q8TF08 81 aa12.02□□□□□ -0.49
GPN3-210ENST00000552180 CXCL5P42830 114 aa12.01□□□□□ -0.49
GPN3-210ENST00000552180 BAGE3Q86Y29 109 aa12.01□□□□□ -0.49
GPN3-210ENST00000552180 IGLV5-39A0A0G2JS06 123 aa12□□□□□ -0.49
GPN3-210ENST00000552180 H3BRM9 83 aa12□□□□□ -0.49
GPN3-210ENST00000552180 ZNF22P17026 224 aaPredicted RBP12□□□□□ -0.49
GPN3-210ENST00000552180 LINC00310P59036 64 aa11.99□□□□□ -0.49
GPN3-210ENST00000552180 TNXBP22105 4242 aa11.99□□□□□ -0.49
GPN3-210ENST00000552180 C11orf86A6NJI1 115 aa11.98□□□□□ -0.49
GPN3-210ENST00000552180 SRSF9Q13242 221 aaKnown RBP eCLIP11.98□□□□□ -0.49
GPN3-210ENST00000552180 FAM19A5Q7Z5A7 132 aaPredicted RBP11.97□□□□□ -0.49
GPN3-210ENST00000552180 KRTAP11-1Q8IUC1 163 aa11.97□□□□□ -0.49
GPN3-210ENST00000552180 FAM19A2Q8N3H0 131 aa11.97□□□□□ -0.49
GPN3-210ENST00000552180 IFI27L1Q96BM0 104 aa11.97□□□□□ -0.49
GPN3-210ENST00000552180 PSORS1C2Q9UIG4 136 aa11.97□□□□□ -0.49
GPN3-210ENST00000552180 TRAV12-1A0A0B4J245 112 aa11.95□□□□□ -0.5
GPN3-210ENST00000552180 HSBP1O75506 76 aa11.95□□□□□ -0.5
GPN3-210ENST00000552180 CHTOPQ9Y3Y2 248 aaKnown RBP11.95□□□□□ -0.5
GPN3-210ENST00000552180 XAGE1AQ9HD64 81 aa11.94□□□□□ -0.5
GPN3-210ENST00000552180 NUPR1O60356 82 aa11.93□□□□□ -0.5
GPN3-210ENST00000552180 SCO1O75880 301 aa11.93□□□□□ -0.5
GPN3-210ENST00000552180 SERF1AO75920 110 aa11.93□□□□□ -0.5
GPN3-210ENST00000552180 SPINK6Q6UWN8 80 aa11.93□□□□□ -0.5
GPN3-210ENST00000552180 M0QXV9 152 aa11.92□□□□□ -0.5
GPN3-210ENST00000552180 MT1HL1P0DM35 61 aa11.92□□□□□ -0.5
GPN3-210ENST00000552180 SERTAD4-AS1Q5TG53 156 aa11.92□□□□□ -0.5
GPN3-210ENST00000552180 TMEM170BQ5T4T1 132 aa11.91□□□□□ -0.5
GPN3-210ENST00000552180 ODF1Q14990 250 aa11.9□□□□□ -0.5
GPN3-210ENST00000552180 C1orf137Q5JT78 98 aa11.89□□□□□ -0.51
GPN3-210ENST00000552180 TMEM223A0PJW6 202 aa11.88□□□□□ -0.51
GPN3-210ENST00000552180 C22orf24Q9Y442 160 aa11.88□□□□□ -0.51
GPN3-210ENST00000552180 HMCN2Q8NDA2 5059 aa11.88□□□□□ -0.51
GPN3-210ENST00000552180 LEPROTL1O95214 131 aa11.87□□□□□ -0.51
GPN3-210ENST00000552180 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
GPN3-210ENST00000552180 LINC01600Q96MT4 127 aa11.86□□□□□ -0.51
GPN3-210ENST00000552180 IGLV7-43P04211 117 aa11.85□□□□□ -0.51
GPN3-210ENST00000552180 TP73-AS1Q9UF72 201 aa11.85□□□□□ -0.51
GPN3-210ENST00000552180 PLA2G2DQ9UNK4 145 aa11.85□□□□□ -0.51
GPN3-210ENST00000552180 UBE2BP63146 152 aa11.84□□□□□ -0.51
GPN3-210ENST00000552180 PFN2P35080 140 aa11.83□□□□□ -0.52
GPN3-210ENST00000552180 ERG28Q9UKR5 140 aa11.83□□□□□ -0.52
GPN3-210ENST00000552180 HIST1H2BKO60814 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST1H2BJP06899 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 FABP4P15090 132 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST1H2BOP23527 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST1H2BBP33778 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST1H2BDP58876 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST1H2BCP62807 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST2H2BEQ16778 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 LBHQ53QV2 105 aaPredicted RBP11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.82□□□□□ -0.52
GPN3-210ENST00000552180 SFTA2Q6UW10 78 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST1H2BHQ93079 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST1H2BNQ99877 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HIST1H2BMQ99879 126 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 HSPB8Q9UJY1 196 aa11.82□□□□□ -0.52
GPN3-210ENST00000552180 IGLV5-37A0A075B6J1 123 aa11.81□□□□□ -0.52
GPN3-210ENST00000552180 H0Y8G0 127 aa11.81□□□□□ -0.52
GPN3-210ENST00000552180 COX17Q14061 63 aa11.81□□□□□ -0.52
GPN3-210ENST00000552180 REG3GQ6UW15 175 aa11.81□□□□□ -0.52
GPN3-210ENST00000552180 MRPL55Q7Z7F7 128 aaKnown RBP11.8□□□□□ -0.52
GPN3-210ENST00000552180 KRTAP10-8P60410 259 aa11.79□□□□□ -0.52
GPN3-210ENST00000552180 SND1-IT1Q9HBX3 110 aa11.79□□□□□ -0.52
GPN3-210ENST00000552180 LINC00167Q96N53 147 aa11.78□□□□□ -0.52
GPN3-210ENST00000552180 DIRC1Q969H9 104 aa11.76□□□□□ -0.53
GPN3-210ENST00000552180 H0Y9J4 135 aa11.75□□□□□ -0.53
GPN3-210ENST00000552180 PLNP26678 52 aa11.75□□□□□ -0.53
GPN3-210ENST00000552180 PMCHL2Q9BQD1 86 aa11.75□□□□□ -0.53
GPN3-210ENST00000552180 RPL37AP8A6NKH3 93 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms