RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 ALKBH7Q9BT30 221 aaPredicted RBP12.54□□□□□ -0.4
SMARCD1-212ENST00000551966 CDIP1Q9H305 208 aa12.54□□□□□ -0.4
SMARCD1-212ENST00000551966 TPRXLQ17RH7 258 aa12.53□□□□□ -0.4
SMARCD1-212ENST00000551966 FAM19A3Q7Z5A8 133 aa12.53□□□□□ -0.4
SMARCD1-212ENST00000551966 C2orf88Q9BSF0 95 aa12.53□□□□□ -0.4
SMARCD1-212ENST00000551966 C2orf66Q6UXQ4 117 aa12.52□□□□□ -0.41
SMARCD1-212ENST00000551966 KRTAP13-1Q8IUC0 172 aa12.52□□□□□ -0.41
SMARCD1-212ENST00000551966 LOC389332A0A1B0GUA5 103 aa12.51□□□□□ -0.41
SMARCD1-212ENST00000551966 LINC00304Q8N9R0 145 aa12.51□□□□□ -0.41
SMARCD1-212ENST00000551966 VCX2Q9H322 139 aa12.51□□□□□ -0.41
SMARCD1-212ENST00000551966 IGLV7-46A0A075B6I9 117 aa12.5□□□□□ -0.41
SMARCD1-212ENST00000551966 F8VRH5 84 aa12.5□□□□□ -0.41
SMARCD1-212ENST00000551966 CDKN2A-AS1Q9UH64 79 aa12.5□□□□□ -0.41
SMARCD1-212ENST00000551966 SRSF3P84103 164 aaKnown RBP12.49□□□□□ -0.41
SMARCD1-212ENST00000551966 CYSLTR1Q9Y271 337 aa12.49□□□□□ -0.41
SMARCD1-212ENST00000551966 GAGE10A6NGK3 116 aa12.48□□□□□ -0.41
SMARCD1-212ENST00000551966 IGIPA6NJ69 53 aa12.48□□□□□ -0.41
SMARCD1-212ENST00000551966 FAM229BQ4G0N7 80 aa12.48□□□□□ -0.41
SMARCD1-212ENST00000551966 Q8N8P6 123 aa12.45□□□□□ -0.42
SMARCD1-212ENST00000551966 NPSP0C0P6 89 aa12.44□□□□□ -0.42
SMARCD1-212ENST00000551966 AKAP14Q86UN6 197 aa12.44□□□□□ -0.42
SMARCD1-212ENST00000551966 MAP1LC3AQ9H492 121 aa12.44□□□□□ -0.42
SMARCD1-212ENST00000551966 UBE2AP49459 152 aa12.43□□□□□ -0.42
SMARCD1-212ENST00000551966 HERVK_113P63121 156 aa12.43□□□□□ -0.42
SMARCD1-212ENST00000551966 ATP5L2Q7Z4Y8 100 aa12.43□□□□□ -0.42
SMARCD1-212ENST00000551966 LAMTOR2Q9Y2Q5 125 aa12.43□□□□□ -0.42
SMARCD1-212ENST00000551966 IGLV5-37A0A075B6J1 123 aa12.42□□□□□ -0.42
SMARCD1-212ENST00000551966 PNRC1Q12796 327 aaPredicted RBP12.42□□□□□ -0.42
SMARCD1-212ENST00000551966 IGKV2D-26A0A0A0MRZ7 120 aa12.41□□□□□ -0.42
SMARCD1-212ENST00000551966 CXCL5P42830 114 aa12.41□□□□□ -0.42
SMARCD1-212ENST00000551966 PPDPFQ9H3Y8 114 aa12.41□□□□□ -0.42
SMARCD1-212ENST00000551966 SCO1O75880 301 aa12.4□□□□□ -0.42
SMARCD1-212ENST00000551966 SEC11AP67812 179 aa12.4□□□□□ -0.42
SMARCD1-212ENST00000551966 ORMDL2Q53FV1 153 aa12.4□□□□□ -0.42
SMARCD1-212ENST00000551966 SMIM1B2RUZ4 78 aa12.39□□□□□ -0.43
SMARCD1-212ENST00000551966 CTAG1AP78358 180 aa12.39□□□□□ -0.43
SMARCD1-212ENST00000551966 GEMIN7Q9H840 131 aaKnown RBP12.39□□□□□ -0.43
SMARCD1-212ENST00000551966 RAB5BP61020 215 aa12.38□□□□□ -0.43
SMARCD1-212ENST00000551966 PEA15Q15121 130 aa12.38□□□□□ -0.43
SMARCD1-212ENST00000551966 IGKV2-28A0A075B6P5 120 aa12.37□□□□□ -0.43
SMARCD1-212ENST00000551966 IGKV2D-28P01615 120 aa12.37□□□□□ -0.43
SMARCD1-212ENST00000551966 PRLHP81277 87 aa12.37□□□□□ -0.43
SMARCD1-212ENST00000551966 LCE2DQ5TA82 110 aaPredicted RBP12.37□□□□□ -0.43
SMARCD1-212ENST00000551966 COX7B2Q8TF08 81 aa12.37□□□□□ -0.43
SMARCD1-212ENST00000551966 NKAPP1Q8N9T2 125 aa12.36□□□□□ -0.43
SMARCD1-212ENST00000551966 K7EMI3 77 aa12.35□□□□□ -0.43
SMARCD1-212ENST00000551966 PDZD11Q5EBL8 140 aa12.35□□□□□ -0.43
SMARCD1-212ENST00000551966 C3orf22Q8N5N4 141 aa12.35□□□□□ -0.43
SMARCD1-212ENST00000551966 PAPPA-AS1Q5QFB9 102 aa12.34□□□□□ -0.43
SMARCD1-212ENST00000551966 TIMM17AQ99595 171 aa12.34□□□□□ -0.43
SMARCD1-212ENST00000551966 hCG_2014768A0A024R1R8 64 aa12.33□□□□□ -0.44
SMARCD1-212ENST00000551966 TOMM6Q96B49 74 aa12.32□□□□□ -0.44
SMARCD1-212ENST00000551966 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
SMARCD1-212ENST00000551966 KRTAP4-1Q9BYQ7 146 aa12.32□□□□□ -0.44
SMARCD1-212ENST00000551966 IGLV5-45A0A087WSX0 123 aa12.31□□□□□ -0.44
SMARCD1-212ENST00000551966 TMEM238C9JI98 176 aa12.31□□□□□ -0.44
SMARCD1-212ENST00000551966 FAM19A1Q7Z5A9 133 aa12.31□□□□□ -0.44
SMARCD1-212ENST00000551966 TINCRA0A1B0GVN0 87 aa12.3□□□□□ -0.44
SMARCD1-212ENST00000551966 TMEM126AQ9H061 195 aa12.3□□□□□ -0.44
SMARCD1-212ENST00000551966 NXT2Q9NPJ8 142 aaKnown RBP12.3□□□□□ -0.44
SMARCD1-212ENST00000551966 ADCYAP1P18509 176 aa12.29□□□□□ -0.44
SMARCD1-212ENST00000551966 SPINK8P0C7L1 97 aa12.28□□□□□ -0.44
SMARCD1-212ENST00000551966 ERASQ7Z444 233 aa12.28□□□□□ -0.44
SMARCD1-212ENST00000551966 M0R378 163 aa12.27□□□□□ -0.45
SMARCD1-212ENST00000551966 VPREB1P12018 145 aa12.27□□□□□ -0.45
SMARCD1-212ENST00000551966 LINC01547P58512 204 aaPredicted RBP12.27□□□□□ -0.45
SMARCD1-212ENST00000551966 ASB16-AS1Q495Z4 193 aa12.27□□□□□ -0.45
SMARCD1-212ENST00000551966 CRCT1Q9UGL9 99 aa12.27□□□□□ -0.45
SMARCD1-212ENST00000551966 G0S2P27469 103 aa12.26□□□□□ -0.45
SMARCD1-212ENST00000551966 KRTAP13-3Q3SY46 172 aa12.26□□□□□ -0.45
SMARCD1-212ENST00000551966 SCGB3A1Q96QR1 104 aa12.26□□□□□ -0.45
SMARCD1-212ENST00000551966 SPAG11AQ6PDA7 123 aa12.25□□□□□ -0.45
SMARCD1-212ENST00000551966 FP248Q71RG6 208 aaPredicted RBP12.25□□□□□ -0.45
SMARCD1-212ENST00000551966 PFN2P35080 140 aa12.24□□□□□ -0.45
SMARCD1-212ENST00000551966 LINC00337Q8N6G1 96 aa12.24□□□□□ -0.45
SMARCD1-212ENST00000551966 CBLN2Q8IUK8 224 aa12.23□□□□□ -0.45
SMARCD1-212ENST00000551966 Q8NDZ9 215 aa12.23□□□□□ -0.45
SMARCD1-212ENST00000551966 CST9LQ9H4G1 147 aa12.23□□□□□ -0.45
SMARCD1-212ENST00000551966 FSIP2Q5CZC0 6907 aa12.23□□□□□ -0.45
SMARCD1-212ENST00000551966 SND1-IT1Q9HBX3 110 aa12.22□□□□□ -0.45
SMARCD1-212ENST00000551966 ATP5LO75964 103 aa12.21□□□□□ -0.45
SMARCD1-212ENST00000551966 KIAA1644Q3SXP7 199 aa12.21□□□□□ -0.45
SMARCD1-212ENST00000551966 ANAPC16Q96DE5 110 aa12.2□□□□□ -0.46
SMARCD1-212ENST00000551966 GNB1LQ9BYB4 327 aa12.2□□□□□ -0.46
SMARCD1-212ENST00000551966 SPRR4Q96PI1 79 aa12.19□□□□□ -0.46
SMARCD1-212ENST00000551966 HIGD2AQ9BW72 106 aa12.19□□□□□ -0.46
SMARCD1-212ENST00000551966 DAND5Q8N907 189 aa12.18□□□□□ -0.46
SMARCD1-212ENST00000551966 MT-ND4LP03901 98 aa12.17□□□□□ -0.46
SMARCD1-212ENST00000551966 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
SMARCD1-212ENST00000551966 RAB14P61106 215 aa12.16□□□□□ -0.46
SMARCD1-212ENST00000551966 RPL24P83731 157 aaKnown RBP12.16□□□□□ -0.46
SMARCD1-212ENST00000551966 C4orf48Q5BLP8 95 aa12.16□□□□□ -0.46
SMARCD1-212ENST00000551966 IGLV5-39A0A0G2JS06 123 aa12.15□□□□□ -0.46
SMARCD1-212ENST00000551966 LINC01546A6NGU7 62 aa12.15□□□□□ -0.46
SMARCD1-212ENST00000551966 PMVKQ15126 192 aa12.15□□□□□ -0.46
SMARCD1-212ENST00000551966 ERG28Q9UKR5 140 aa12.15□□□□□ -0.46
SMARCD1-212ENST00000551966 Q8NBF4 154 aa12.14□□□□□ -0.47
SMARCD1-212ENST00000551966 H3BRM9 83 aa12.13□□□□□ -0.47
SMARCD1-212ENST00000551966 SEC61BP60468 96 aaKnown RBP12.13□□□□□ -0.47
SMARCD1-212ENST00000551966 ZNF625Q96I27 306 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms