RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 KRTAP9-7A8MTY7 169 aa8.6□□□□□ -1.03
CACNB3-220ENST00000551716 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
CACNB3-220ENST00000551716 EIF5A2Q9GZV4 153 aaKnown RBP8.6□□□□□ -1.03
CACNB3-220ENST00000551716 CXCL5P42830 114 aa8.59□□□□□ -1.03
CACNB3-220ENST00000551716 C3orf22Q8N5N4 141 aa8.59□□□□□ -1.03
CACNB3-220ENST00000551716 BATF3Q9NR55 127 aa8.59□□□□□ -1.03
CACNB3-220ENST00000551716 NAT8BQ9UHF3 227 aa8.59□□□□□ -1.03
CACNB3-220ENST00000551716 NDUFA12Q9UI09 145 aa8.59□□□□□ -1.03
CACNB3-220ENST00000551716 A0A1B0GW15 77 aa8.58□□□□□ -1.04
CACNB3-220ENST00000551716 MT1HP80294 61 aa8.58□□□□□ -1.04
CACNB3-220ENST00000551716 DAND5Q8N907 189 aa8.58□□□□□ -1.04
CACNB3-220ENST00000551716 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
CACNB3-220ENST00000551716 SPINK1P00995 79 aa8.57□□□□□ -1.04
CACNB3-220ENST00000551716 LINC01551Q86U37 167 aa8.57□□□□□ -1.04
CACNB3-220ENST00000551716 VCX2Q9H322 139 aa8.57□□□□□ -1.04
CACNB3-220ENST00000551716 PPBPP02775 128 aa8.56□□□□□ -1.04
CACNB3-220ENST00000551716 CEBPGP53567 150 aa8.56□□□□□ -1.04
CACNB3-220ENST00000551716 SEC11AP67812 179 aa8.56□□□□□ -1.04
CACNB3-220ENST00000551716 PRLHP81277 87 aa8.56□□□□□ -1.04
CACNB3-220ENST00000551716 FAM19A1Q7Z5A9 133 aa8.56□□□□□ -1.04
CACNB3-220ENST00000551716 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
CACNB3-220ENST00000551716 D6R8Y8 96 aa8.55□□□□□ -1.04
CACNB3-220ENST00000551716 F8W036 122 aa8.55□□□□□ -1.04
CACNB3-220ENST00000551716 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
CACNB3-220ENST00000551716 LORP23490 312 aaPredicted RBP8.55□□□□□ -1.04
CACNB3-220ENST00000551716 SMIM7Q9BQ49 75 aa8.55□□□□□ -1.04
CACNB3-220ENST00000551716 V9GYV3 84 aa8.55□□□□□ -1.04
CACNB3-220ENST00000551716 S100A8P05109 93 aa8.54□□□□□ -1.04
CACNB3-220ENST00000551716 HERVK_113P63121 156 aa8.54□□□□□ -1.04
CACNB3-220ENST00000551716 XP32Q5T750 250 aa8.54□□□□□ -1.04
CACNB3-220ENST00000551716 FAM19A3Q7Z5A8 133 aa8.54□□□□□ -1.04
CACNB3-220ENST00000551716 CBLN2Q8IUK8 224 aa8.54□□□□□ -1.04
CACNB3-220ENST00000551716 NPYP01303 97 aa8.53□□□□□ -1.04
CACNB3-220ENST00000551716 NPSP0C0P6 89 aa8.53□□□□□ -1.04
CACNB3-220ENST00000551716 FAM74A3Q4VXF1 159 aa8.53□□□□□ -1.04
CACNB3-220ENST00000551716 C2orf66Q6UXQ4 117 aa8.53□□□□□ -1.04
CACNB3-220ENST00000551716 AMELXQ99217 191 aa8.53□□□□□ -1.04
CACNB3-220ENST00000551716 TMEM126AQ9H061 195 aa8.53□□□□□ -1.04
CACNB3-220ENST00000551716 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
CACNB3-220ENST00000551716 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
CACNB3-220ENST00000551716 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.51□□□□□ -1.05
CACNB3-220ENST00000551716 KRTAP19-2Q3LHN2 52 aa8.51□□□□□ -1.05
CACNB3-220ENST00000551716 Q8NBF4 154 aa8.51□□□□□ -1.05
CACNB3-220ENST00000551716 GEMIN7Q9H840 131 aaKnown RBP8.51□□□□□ -1.05
CACNB3-220ENST00000551716 CDKN2A-AS1Q9UH64 79 aa8.51□□□□□ -1.05
CACNB3-220ENST00000551716 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
CACNB3-220ENST00000551716 ZNF706Q9Y5V0 76 aaPredicted RBP8.51□□□□□ -1.05
CACNB3-220ENST00000551716 RGS21Q2M5E4 152 aa8.5□□□□□ -1.05
CACNB3-220ENST00000551716 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
CACNB3-220ENST00000551716 SLC51BQ86UW2 128 aa8.5□□□□□ -1.05
CACNB3-220ENST00000551716 SMIM27A0A1W2PRY6 76 aa8.49□□□□□ -1.05
CACNB3-220ENST00000551716 ZC2HC1BQ5TFG8 222 aa8.49□□□□□ -1.05
CACNB3-220ENST00000551716 ORMDL3Q8N138 153 aa8.49□□□□□ -1.05
CACNB3-220ENST00000551716 SPRR4Q96PI1 79 aa8.49□□□□□ -1.05
CACNB3-220ENST00000551716 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
CACNB3-220ENST00000551716 RAB5BP61020 215 aa8.48□□□□□ -1.05
CACNB3-220ENST00000551716 BLOC1S1P78537 153 aa8.48□□□□□ -1.05
CACNB3-220ENST00000551716 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
CACNB3-220ENST00000551716 M0R378 163 aa8.47□□□□□ -1.05
CACNB3-220ENST00000551716 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
CACNB3-220ENST00000551716 PDZD11Q5EBL8 140 aa8.47□□□□□ -1.05
CACNB3-220ENST00000551716 TMEM136Q6ZRR5 245 aa8.47□□□□□ -1.05
CACNB3-220ENST00000551716 PRSS47A8MTI9 375 aa8.46□□□□□ -1.06
CACNB3-220ENST00000551716 SCO1O75880 301 aa8.46□□□□□ -1.06
CACNB3-220ENST00000551716 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
CACNB3-220ENST00000551716 COX7B2Q8TF08 81 aa8.46□□□□□ -1.06
CACNB3-220ENST00000551716 PRELID3AQ96N28 172 aa8.46□□□□□ -1.06
CACNB3-220ENST00000551716 M0R2T5 61 aa8.45□□□□□ -1.06
CACNB3-220ENST00000551716 SLC25A20O43772 301 aa8.45□□□□□ -1.06
CACNB3-220ENST00000551716 IGIPA6NJ69 53 aa8.44□□□□□ -1.06
CACNB3-220ENST00000551716 ORMDL2Q53FV1 153 aa8.44□□□□□ -1.06
CACNB3-220ENST00000551716 LAMTOR2Q9Y2Q5 125 aa8.44□□□□□ -1.06
CACNB3-220ENST00000551716 SMIM1B2RUZ4 78 aa8.43□□□□□ -1.06
CACNB3-220ENST00000551716 K7EMI3 77 aa8.43□□□□□ -1.06
CACNB3-220ENST00000551716 G0S2P27469 103 aa8.43□□□□□ -1.06
CACNB3-220ENST00000551716 LOC389332A0A1B0GUA5 103 aa8.42□□□□□ -1.06
CACNB3-220ENST00000551716 ATP5LO75964 103 aa8.42□□□□□ -1.06
CACNB3-220ENST00000551716 MRPL54Q6P161 138 aaKnown RBP8.42□□□□□ -1.06
CACNB3-220ENST00000551716 Q8N377 158 aa8.42□□□□□ -1.06
CACNB3-220ENST00000551716 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
CACNB3-220ENST00000551716 IGLV8-61A0A075B6I0 122 aa8.41□□□□□ -1.06
CACNB3-220ENST00000551716 VPREB1P12018 145 aa8.41□□□□□ -1.06
CACNB3-220ENST00000551716 Q8N8P6 123 aa8.41□□□□□ -1.06
CACNB3-220ENST00000551716 A0A1B0GXF2 115 aa8.4□□□□□ -1.06
CACNB3-220ENST00000551716 SRP19P09132 144 aaKnown RBP8.39□□□□□ -1.07
CACNB3-220ENST00000551716 RPL23P62829 140 aaKnown RBP8.39□□□□□ -1.07
CACNB3-220ENST00000551716 TINCRA0A1B0GVN0 87 aa8.38□□□□□ -1.07
CACNB3-220ENST00000551716 ADIRFQ15847 76 aa8.38□□□□□ -1.07
CACNB3-220ENST00000551716 PCOTHQ58A44 107 aa8.38□□□□□ -1.07
CACNB3-220ENST00000551716 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
CACNB3-220ENST00000551716 TIMM17AQ99595 171 aa8.38□□□□□ -1.07
CACNB3-220ENST00000551716 SND1-IT1Q9HBX3 110 aa8.38□□□□□ -1.07
CACNB3-220ENST00000551716 IGLV5-45A0A087WSX0 123 aa8.37□□□□□ -1.07
CACNB3-220ENST00000551716 PFN2P35080 140 aa8.37□□□□□ -1.07
CACNB3-220ENST00000551716 ATP5L2Q7Z4Y8 100 aa8.37□□□□□ -1.07
CACNB3-220ENST00000551716 RAB14P61106 215 aa8.36□□□□□ -1.07
CACNB3-220ENST00000551716 COX17Q14061 63 aa8.36□□□□□ -1.07
CACNB3-220ENST00000551716 NAT8Q9UHE5 227 aa8.36□□□□□ -1.07
CACNB3-220ENST00000551716 AKAP14Q86UN6 197 aa8.35□□□□□ -1.07
CACNB3-220ENST00000551716 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms