RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 ERASQ7Z444 233 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 ZNF664Q8N3J9 261 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 OR5A1Q8NGJ0 315 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 FAM104AQ969W3 186 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 TIMM17AQ99595 171 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 CDC42SE2Q9NRR3 84 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 TRAV8-3A0A0A6YYJ7 113 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 ANGP03950 147 aaKnown RBP4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 PDZD11Q5EBL8 140 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 ENHOQ6UWT2 76 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 LINC00269Q8N2A0 174 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 STPG4Q8N801 248 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 TMEM141Q96I45 108 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 KLK12Q9UKR0 248 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 IGLV4-3A0A075B6K6 122 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 TRAV8-4A0A0B4J246 113 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 CCL25O15444 150 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 NUPR1O60356 82 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 NDUFA6P56556 154 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 REG3AQ06141 175 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 PMCHL1Q16048 86 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 MIAQ16674 131 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 Q6ZUT4 128 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 SCGB3A1Q96QR1 104 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 AMELXQ99217 191 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 LINC00959A0A1B0GUT2 108 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 ATP5LO75964 103 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 CRPP02741 224 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 Q6ZN92 141 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 TEX43Q6ZNM6 134 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 FAM19A2Q8N3H0 131 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 UBE2WQ96B02 151 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 RMI2Q96E14 147 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 PACRGQ96M98 296 aaPredicted RBP4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 OPRPNQ99935 248 aaPredicted RBP4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 VCX2Q9H322 139 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 LEPROTL1O95214 131 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 PMVKQ15126 192 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 SS18Q15532 418 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 RNASE13Q5GAN3 156 aaKnown RBP4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 CLPSL2Q6UWE3 100 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 FAM19A3Q7Z5A8 133 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 BAALCQ8WXS3 180 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 C2orf88Q9BSF0 95 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 HSPB8Q9UJY1 196 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 TRAV12-1A0A0B4J245 112 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 S100A6P06703 90 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 UBE2D1P51668 147 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 HNRNPA3P51991 378 aaKnown RBP4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 KRTAP26-1Q6PEX3 210 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 Q75L30 129 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 IFI27L1Q96BM0 104 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 CST9LQ9H4G1 147 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 Q9HAA7 133 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 IGLV10-54A0A075B6I4 117 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 IGKV2D-24A0A075B6R9 120 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 TRAV13-1A0A0B4J241 112 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 IGKV3OR2-268A0A0C4DH90 116 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 C5orf52A6NGY3 159 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 SEC11AP67812 179 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 LINC00242Q5T6M2 205 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 CD164L2Q6UWJ8 174 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 HIST3H2BBQ8N257 126 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 CHCHD10Q8WYQ3 142 aaPredicted RBP4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 IGHV3OR16-9A0A0B4J2B5 98 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 TINCRA0A1B0GVN0 87 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 PSCAO43653 123 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 FABP4P15090 132 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 XCL1P47992 114 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 SNRPEP62304 92 aaKnown RBP4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 MAP1LC3CQ9BXW4 147 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 A0A0J9YXV3 536 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 IGLC3P0DOY3 106 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 S100A2P29034 98 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 HERVK_113P63121 156 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 COX6A2Q02221 97 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 HIST1H2BLQ99880 126 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 IGLV4-69A0A075B6H9 119 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 A0A087WZ39 114 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 LRCOL1A6NCL2 159 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 F8VRH5 84 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 COX7A2LO14548 114 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 C3orf79P0CE67 100 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 PET117Q6UWS5 81 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 LINC01561Q8N1V8 128 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 GEMIN7Q9H840 131 aaKnown RBP4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 CHTOPQ9Y3Y2 248 aaKnown RBP4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 A0A087WTM6 91 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 IGHV1-58A0A0C4DH39 117 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 APOMO95445 188 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 PLNP26678 52 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 LINC01545Q5VT33 79 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 CFAP161Q6P656 301 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms