RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 C18orf32Q8TCD1 76 aa6.93□□□□□ -1.3
PTCH1-222ENST00000551425 TMEM18Q96B42 140 aa6.93□□□□□ -1.3
PTCH1-222ENST00000551425 G0S2P27469 103 aa6.92□□□□□ -1.3
PTCH1-222ENST00000551425 ORMDL2Q53FV1 153 aa6.92□□□□□ -1.3
PTCH1-222ENST00000551425 FA2HQ7L5A8 372 aa6.92□□□□□ -1.3
PTCH1-222ENST00000551425 OR10D4PQ8NGN7 298 aa6.92□□□□□ -1.3
PTCH1-222ENST00000551425 LINC00614P0C842 121 aa6.91□□□□□ -1.3
PTCH1-222ENST00000551425 C5orf38Q86SI9 138 aa6.91□□□□□ -1.3
PTCH1-222ENST00000551425 LINC01546A6NGU7 62 aa6.9□□□□□ -1.3
PTCH1-222ENST00000551425 LINC00173Q6ZV60 143 aa6.9□□□□□ -1.3
PTCH1-222ENST00000551425 NDUFA1O15239 70 aa6.89□□□□□ -1.31
PTCH1-222ENST00000551425 GAGE2EQ4V326 116 aa6.89□□□□□ -1.31
PTCH1-222ENST00000551425 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
PTCH1-222ENST00000551425 BAGE3Q86Y29 109 aa6.89□□□□□ -1.31
PTCH1-222ENST00000551425 GAGE2DQ9UEU5 116 aa6.89□□□□□ -1.31
PTCH1-222ENST00000551425 LINC01549A6NIU2 74 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 NUPR1O60356 82 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 CTAG1AP78358 180 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 ASB16-AS1Q495Z4 193 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 LINC00304Q8N9R0 145 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 CHCHD1Q96BP2 118 aaKnown RBP6.88□□□□□ -1.31
PTCH1-222ENST00000551425 TIMM21Q9BVV7 248 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 KRTAP4-1Q9BYQ7 146 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 CYSLTR1Q9Y271 337 aa6.88□□□□□ -1.31
PTCH1-222ENST00000551425 CSDC2Q9Y534 153 aaKnown RBP6.88□□□□□ -1.31
PTCH1-222ENST00000551425 TRAV13-1A0A0B4J241 112 aa6.87□□□□□ -1.31
PTCH1-222ENST00000551425 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
PTCH1-222ENST00000551425 KRTAP13-2Q52LG2 175 aa6.87□□□□□ -1.31
PTCH1-222ENST00000551425 C2orf66Q6UXQ4 117 aa6.87□□□□□ -1.31
PTCH1-222ENST00000551425 UNQ6190/PRO20217Q6UXQ8 127 aa6.87□□□□□ -1.31
PTCH1-222ENST00000551425 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
PTCH1-222ENST00000551425 URB1-AS1Q96HZ7 61 aa6.87□□□□□ -1.31
PTCH1-222ENST00000551425 SPANXA1Q9NS26 97 aa6.87□□□□□ -1.31
PTCH1-222ENST00000551425 UBE2D4Q9Y2X8 147 aa6.87□□□□□ -1.31
PTCH1-222ENST00000551425 KRTAP9-7A8MTY7 169 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST1H2BKO60814 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST1H2BJP06899 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST1H2BOP23527 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST1H2BBP33778 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST1H2BDP58876 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST1H2BCP62807 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST2H2BEQ16778 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST1H2BHQ93079 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST1H2BNQ99877 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HIST1H2BMQ99879 126 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 PYGO1Q9Y3Y4 419 aa6.86□□□□□ -1.31
PTCH1-222ENST00000551425 HSBP1O75506 76 aa6.85□□□□□ -1.31
PTCH1-222ENST00000551425 NPSP0C0P6 89 aa6.85□□□□□ -1.31
PTCH1-222ENST00000551425 RPL28P46779 137 aaKnown RBP6.85□□□□□ -1.31
PTCH1-222ENST00000551425 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
PTCH1-222ENST00000551425 C9orf129Q5T035 196 aaKnown RBP6.85□□□□□ -1.31
PTCH1-222ENST00000551425 HBDP02042 147 aa6.84□□□□□ -1.31
PTCH1-222ENST00000551425 MRPS36P82909 103 aaKnown RBP6.84□□□□□ -1.31
PTCH1-222ENST00000551425 TMEM141Q96I45 108 aa6.84□□□□□ -1.31
PTCH1-222ENST00000551425 SCGB3A1Q96QR1 104 aa6.84□□□□□ -1.31
PTCH1-222ENST00000551425 TIMM17AQ99595 171 aa6.84□□□□□ -1.31
PTCH1-222ENST00000551425 ANAPC11Q9NYG5 84 aa6.84□□□□□ -1.31
PTCH1-222ENST00000551425 IGIPA6NJ69 53 aa6.83□□□□□ -1.32
PTCH1-222ENST00000551425 SERF1AO75920 110 aa6.83□□□□□ -1.32
PTCH1-222ENST00000551425 PAPPA-AS1Q5QFB9 102 aa6.83□□□□□ -1.32
PTCH1-222ENST00000551425 LINC00242Q5T6M2 205 aa6.83□□□□□ -1.32
PTCH1-222ENST00000551425 Q6ZN92 141 aa6.83□□□□□ -1.32
PTCH1-222ENST00000551425 ERASQ7Z444 233 aa6.83□□□□□ -1.32
PTCH1-222ENST00000551425 IGLV4-3A0A075B6K6 122 aa6.82□□□□□ -1.32
PTCH1-222ENST00000551425 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
PTCH1-222ENST00000551425 NDUFC2-KCTD14E9PQ53 114 aa6.82□□□□□ -1.32
PTCH1-222ENST00000551425 NDUFA6P56556 154 aa6.82□□□□□ -1.32
PTCH1-222ENST00000551425 PMCHL1Q16048 86 aa6.82□□□□□ -1.32
PTCH1-222ENST00000551425 FAM229BQ4G0N7 80 aa6.82□□□□□ -1.32
PTCH1-222ENST00000551425 LCE2CQ5TA81 110 aa6.82□□□□□ -1.32
PTCH1-222ENST00000551425 Q6ZUT4 128 aa6.82□□□□□ -1.32
PTCH1-222ENST00000551425 A0A096LNJ9 63 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 BCE1O60756 84 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 ATP5LO75964 103 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 CFC1BP0CG36 223 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 LINC00310P59036 64 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 LBHQ53QV2 105 aaPredicted RBP6.81□□□□□ -1.32
PTCH1-222ENST00000551425 PDZD11Q5EBL8 140 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 COA6Q5JTJ3 125 aaKnown RBP6.81□□□□□ -1.32
PTCH1-222ENST00000551425 TEX43Q6ZNM6 134 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 FAM19A2Q8N3H0 131 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 LINC00337Q8N6G1 96 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 VCX2Q9H322 139 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
PTCH1-222ENST00000551425 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
PTCH1-222ENST00000551425 KIAA0087Q14695 138 aa6.8□□□□□ -1.32
PTCH1-222ENST00000551425 FAM104AQ969W3 186 aa6.8□□□□□ -1.32
PTCH1-222ENST00000551425 AMELXQ99217 191 aa6.8□□□□□ -1.32
PTCH1-222ENST00000551425 C2orf88Q9BSF0 95 aa6.8□□□□□ -1.32
PTCH1-222ENST00000551425 IFITM10A6NMD0 228 aa6.79□□□□□ -1.32
PTCH1-222ENST00000551425 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
PTCH1-222ENST00000551425 LEPROTL1O95214 131 aa6.79□□□□□ -1.32
PTCH1-222ENST00000551425 S100A6P06703 90 aa6.79□□□□□ -1.32
PTCH1-222ENST00000551425 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
PTCH1-222ENST00000551425 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms