RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 CLPSL1A2RUU4 121 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 CPSF4LA6NMK7 179 aaKnown RBP2.4□□□□□ -2.03
LETMD1-226ENST00000550755 H0YGG7 62 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 INE1O15225 51 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 STATHP02808 62 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 COX6CP09669 75 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 ELOF1P60002 83 aaKnown RBP2.4□□□□□ -2.03
LETMD1-226ENST00000550755 RPL37AP61513 92 aaKnown RBP2.4□□□□□ -2.03
LETMD1-226ENST00000550755 Q5VV11 94 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 DYNLRB1Q9NP97 96 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 ICE1Q9Y2F5 2266 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 C5orf42Q9H799 3197 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 ASCC3Q8N3C0 2202 aaKnown RBP2.4□□□□□ -2.03
LETMD1-226ENST00000550755 TRBV6-7A0A0A0MS04 114 aa2.39□□□□□ -2.03
LETMD1-226ENST00000550755 A0A1B0GWA3 101 aa2.39□□□□□ -2.03
LETMD1-226ENST00000550755 H7BZZ5 65 aa2.39□□□□□ -2.03
LETMD1-226ENST00000550755 IL9P15248 144 aa2.39□□□□□ -2.03
LETMD1-226ENST00000550755 KRTAP12-3P60328 96 aa2.39□□□□□ -2.03
LETMD1-226ENST00000550755 SPATA45Q537H7 98 aa2.39□□□□□ -2.03
LETMD1-226ENST00000550755 SFTA2Q6UW10 78 aa2.39□□□□□ -2.03
LETMD1-226ENST00000550755 Q6ZRN7 208 aaPredicted RBP2.39□□□□□ -2.03
LETMD1-226ENST00000550755 VMO1Q7Z5L0 202 aa2.39□□□□□ -2.03
LETMD1-226ENST00000550755 REV3LO60673 3130 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 TRAV1-2A0A0B4J238 106 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 CCL3L1P16619 93 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 DEFB110Q30KQ9 67 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 ETDBQ3ZM63 59 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 LINC01590Q5TEZ4 76 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 INTS1Q8N201 2190 aaKnown RBP2.38□□□□□ -2.03
LETMD1-226ENST00000550755 NDUFA4L2Q9NRX3 87 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 LENEPQ9Y5L5 61 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 SZT2Q5T011 3432 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 CACNA1CQ13936 2221 aa2.38□□□□□ -2.03
LETMD1-226ENST00000550755 A0A1W2PPM0 123 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 M0R2N4 97 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 PPP1R17O96001 155 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 FAM74A4Q5TZK3 123 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 COX7B2Q8TF08 81 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 BPESC1Q9GZL8 116 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 PRO3102Q9H379 93 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 SMCO4Q9NRQ5 59 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 ABRACLQ9P1F3 81 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 HIGD1BQ9P298 99 aa2.37□□□□□ -2.03
LETMD1-226ENST00000550755 PIN1P1O15428 100 aa2.36□□□□□ -2.03
LETMD1-226ENST00000550755 CAV3P56539 151 aa2.36□□□□□ -2.03
LETMD1-226ENST00000550755 SMIM4Q8WVI0 70 aa2.36□□□□□ -2.03
LETMD1-226ENST00000550755 ZNF625Q96I27 306 aaPredicted RBP2.36□□□□□ -2.03
LETMD1-226ENST00000550755 CDC42SE2Q9NRR3 84 aa2.36□□□□□ -2.03
LETMD1-226ENST00000550755 SNURFQ9Y675 71 aa2.36□□□□□ -2.03
LETMD1-226ENST00000550755 UNC80Q8N2C7 3258 aa2.36□□□□□ -2.03
LETMD1-226ENST00000550755 DNAH14Q0VDD8 3507 aa2.36□□□□□ -2.03
LETMD1-226ENST00000550755 NCOA6Q14686 2063 aaPredicted RBP2.35□□□□□ -2.03
LETMD1-226ENST00000550755 TRGV2A0A075B6R0 118 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 IGKV3D-7A0A0C4DH55 119 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 IGKV3OR2-268A0A0C4DH90 116 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 NBDYA0A0U1RRE5 68 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 IGKV2-29A2NJV5 120 aaPredicted RBP2.35□□□□□ -2.03
LETMD1-226ENST00000550755 TMEM14DPA8MWL7 114 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 PDCD5O14737 125 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 DEFA5Q01523 94 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 SPAG11BQ08648 103 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 WFDC2Q14508 124 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 PMCHL1Q16048 86 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 NMSQ5H8A3 153 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 SPAG11AQ6PDA7 123 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 PPP1R1CQ8WVI7 109 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 XIRP2A4UGR9 3374 aa2.35□□□□□ -2.03
LETMD1-226ENST00000550755 IGKV2-40A0A087WW87 121 aaPredicted RBP2.34□□□□□ -2.03
LETMD1-226ENST00000550755 LOC110117498A0A087WWA1 95 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 KANTRA0A1W2PQU2 76 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 BCE1O60756 84 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 IGKV2D-40P01614 121 aaPredicted RBP2.34□□□□□ -2.03
LETMD1-226ENST00000550755 KLKP1Q107X0 134 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 FXYD3Q14802 87 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 DEFB133Q30KQ1 61 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 TMEM170BQ5T4T1 132 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 FAM223AQ8IWN6 122 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 TOMM5Q8N4H5 51 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 U3KQA8 63 aa2.34□□□□□ -2.03
LETMD1-226ENST00000550755 SDK1Q7Z5N4 2213 aa2.34□□□□□ -2.04
LETMD1-226ENST00000550755 CACNA1GO43497 2377 aa2.34□□□□□ -2.04
LETMD1-226ENST00000550755 NCOR1O75376 2440 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 MYO7BQ6PIF6 2116 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 TRBV25-1A0A075B6N4 114 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 SNRPGP15A8MWD9 76 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 FXYD4P59646 89 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 Q5BKY6 102 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 BVES-AS1Q5T3Y7 98 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 ZNF563Q8TA94 476 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 TTTY10Q9BZA0 68 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 ZDBF2Q9HCK1 2354 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 TECTAO75443 2155 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 USP34Q70CQ2 3546 aa2.33□□□□□ -2.04
LETMD1-226ENST00000550755 AHCTF1Q8WYP5 2266 aa2.32□□□□□ -2.04
LETMD1-226ENST00000550755 IGLC2P0DOY2 106 aa2.32□□□□□ -2.04
LETMD1-226ENST00000550755 IGLC3P0DOY3 106 aa2.32□□□□□ -2.04
LETMD1-226ENST00000550755 Q86TA4 180 aa2.32□□□□□ -2.04
LETMD1-226ENST00000550755 C5orf56Q8N8D9 126 aa2.32□□□□□ -2.04
LETMD1-226ENST00000550755 R4GMQ9 66 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms