RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 IFI27P40305 119 aaPredicted RBP4.28□□□□□ -1.72
CBX5-204ENST00000550411 UBE2D1P51668 147 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 KIAA0087Q14695 138 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 MAJINQ3KP22 176 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 C10orf25Q5T742 122 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 C2orf66Q6UXQ4 117 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 C7orf33Q8WU49 177 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 URB1-AS1Q96HZ7 61 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 TMEM141Q96I45 108 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 C2orf48Q96LS8 159 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 AMELXQ99217 191 aa4.28□□□□□ -1.72
CBX5-204ENST00000550411 A0A087WZ39 114 aa4.27□□□□□ -1.73
CBX5-204ENST00000550411 LINC01546A6NGU7 62 aa4.27□□□□□ -1.73
CBX5-204ENST00000550411 RAB5AP20339 215 aa4.27□□□□□ -1.73
CBX5-204ENST00000550411 PRR3P79522 188 aaKnown RBP4.27□□□□□ -1.73
CBX5-204ENST00000550411 STPG4Q8N801 248 aa4.27□□□□□ -1.73
CBX5-204ENST00000550411 OR10D4PQ8NGN7 298 aa4.27□□□□□ -1.73
CBX5-204ENST00000550411 ORAOV1Q8WV07 137 aa4.27□□□□□ -1.73
CBX5-204ENST00000550411 LINC01600Q96MT4 127 aa4.27□□□□□ -1.73
CBX5-204ENST00000550411 ALKBH7Q9BT30 221 aaPredicted RBP4.27□□□□□ -1.73
CBX5-204ENST00000550411 NXT2Q9NPJ8 142 aaKnown RBP4.27□□□□□ -1.73
CBX5-204ENST00000550411 CYSLTR1Q9Y271 337 aa4.27□□□□□ -1.73
CBX5-204ENST00000550411 A0A1W2PNN7 141 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 APOMO95445 188 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 RHEBQ15382 184 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 ORMDL2Q53FV1 153 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 FAM19A3Q7Z5A8 133 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 YPEL4Q96NS1 127 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 CAMK2N2Q96S95 79 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 GNB1LQ9BYB4 327 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 RPS10P5Q9NQ39 176 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 SMCO4Q9NRQ5 59 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 C6orf48Q9UBA6 75 aa4.26□□□□□ -1.73
CBX5-204ENST00000550411 A0A096LNJ9 63 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 TGIF2-C20orf24A0A0A6YYL0 155 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 LOC107984640A0A0U1RRK4 108 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 K7EMI3 77 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 UNQ6190/PRO20217Q6UXQ8 127 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 TEX43Q6ZNM6 134 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 KRTAP7-1Q8IUC3 87 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 CBLN2Q8IUK8 224 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 TOMM6Q96B49 74 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 TIMM17AQ99595 171 aa4.25□□□□□ -1.73
CBX5-204ENST00000550411 MRPL35Q9NZE8 188 aaKnown RBP4.25□□□□□ -1.73
CBX5-204ENST00000550411 RPL18AQ02543 176 aaKnown RBP4.24□□□□□ -1.73
CBX5-204ENST00000550411 C2orf82Q6UX34 121 aa4.24□□□□□ -1.73
CBX5-204ENST00000550411 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
CBX5-204ENST00000550411 LINC00474Q9P2X8 69 aa4.24□□□□□ -1.73
CBX5-204ENST00000550411 FAM168BA1KXE4 195 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 NDUFA1O15239 70 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 MT-ND6P03923 174 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 TLX1NBP0CAT3 122 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 S100PP25815 95 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 KRTAP10-8P60410 259 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 C9orf116Q5BN46 136 aaPredicted RBP4.23□□□□□ -1.73
CBX5-204ENST00000550411 REG3GQ6UW15 175 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 SPINK6Q6UWN8 80 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 Q6ZRP5 223 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 LINC01561Q8N1V8 128 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 C2orf88Q9BSF0 95 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 CDKN2A-AS1Q9UH64 79 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 PKIGQ9Y2B9 76 aa4.23□□□□□ -1.73
CBX5-204ENST00000550411 IGLV5-45A0A087WSX0 123 aa4.22□□□□□ -1.73
CBX5-204ENST00000550411 F8WDY8 70 aa4.22□□□□□ -1.73
CBX5-204ENST00000550411 FABP9Q0Z7S8 132 aa4.22□□□□□ -1.73
CBX5-204ENST00000550411 COX19Q49B96 90 aa4.22□□□□□ -1.73
CBX5-204ENST00000550411 Q6ZN92 141 aa4.22□□□□□ -1.73
CBX5-204ENST00000550411 PHF5AQ7RTV0 110 aaKnown RBP4.22□□□□□ -1.73
CBX5-204ENST00000550411 ERASQ7Z444 233 aa4.22□□□□□ -1.73
CBX5-204ENST00000550411 C18orf32Q8TCD1 76 aa4.22□□□□□ -1.73
CBX5-204ENST00000550411 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
CBX5-204ENST00000550411 VCX2Q9H322 139 aa4.22□□□□□ -1.73
CBX5-204ENST00000550411 TRBV30A0A0K0K1B3 111 aa4.21□□□□□ -1.74
CBX5-204ENST00000550411 LOC105371267A0A1B0GV96 52 aa4.21□□□□□ -1.74
CBX5-204ENST00000550411 COLCA2A8K830 154 aa4.21□□□□□ -1.74
CBX5-204ENST00000550411 SMIM1B2RUZ4 78 aa4.21□□□□□ -1.74
CBX5-204ENST00000550411 SRSF9Q13242 221 aaKnown RBP eCLIP4.21□□□□□ -1.74
CBX5-204ENST00000550411 C9orf129Q5T035 196 aaKnown RBP4.21□□□□□ -1.74
CBX5-204ENST00000550411 SCGB3A1Q96QR1 104 aa4.21□□□□□ -1.74
CBX5-204ENST00000550411 CST9LQ9H4G1 147 aa4.21□□□□□ -1.74
CBX5-204ENST00000550411 PSORS1C2Q9UIG4 136 aa4.21□□□□□ -1.74
CBX5-204ENST00000550411 LPAP08519 4548 aa4.21□□□□□ -1.74
CBX5-204ENST00000550411 TINCRA0A1B0GVN0 87 aa4.2□□□□□ -1.74
CBX5-204ENST00000550411 RAB5BP61020 215 aa4.2□□□□□ -1.74
CBX5-204ENST00000550411 HERVK_113P63121 156 aa4.2□□□□□ -1.74
CBX5-204ENST00000550411 PMCHL1Q16048 86 aa4.2□□□□□ -1.74
CBX5-204ENST00000550411 FA2HQ7L5A8 372 aa4.2□□□□□ -1.74
CBX5-204ENST00000550411 Q8IZM0 81 aa4.2□□□□□ -1.74
CBX5-204ENST00000550411 IGLV5-39A0A0G2JS06 123 aa4.19□□□□□ -1.74
CBX5-204ENST00000550411 NDUFC2-KCTD14E9PQ53 114 aa4.19□□□□□ -1.74
CBX5-204ENST00000550411 PDZD11Q5EBL8 140 aa4.19□□□□□ -1.74
CBX5-204ENST00000550411 FAM19A5Q7Z5A7 132 aaPredicted RBP4.19□□□□□ -1.74
CBX5-204ENST00000550411 LINC00469Q8N7U9 141 aa4.19□□□□□ -1.74
CBX5-204ENST00000550411 TOMM7Q9P0U1 55 aa4.19□□□□□ -1.74
CBX5-204ENST00000550411 TRAPPC1Q9Y5R8 145 aa4.19□□□□□ -1.74
CBX5-204ENST00000550411 SPINK8P0C7L1 97 aa4.18□□□□□ -1.74
CBX5-204ENST00000550411 IGLC3P0DOY3 106 aa4.18□□□□□ -1.74
CBX5-204ENST00000550411 ZNF22P17026 224 aaPredicted RBP4.18□□□□□ -1.74
CBX5-204ENST00000550411 G0S2P27469 103 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms