RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 DEFB131AP59861 70 aa2.34□□□□□ -2.03
HCFC2-204ENST00000550335 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.34□□□□□ -2.03
HCFC2-204ENST00000550335 WFDC10AQ9H1F0 79 aa2.34□□□□□ -2.03
HCFC2-204ENST00000550335 LCE6AA0A183 80 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 TMEM189A5PLL7 270 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 NUPR2A6NF83 97 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 K7ERJ3 54 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 IAPPP10997 89 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 HLA-DRB4P13762 266 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 RPL7P18124 248 aaKnown RBP2.33□□□□□ -2.04
HCFC2-204ENST00000550335 FOXI2Q6ZQN5 318 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 CYP2G1PQ6ZSU1 146 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 OR8I2Q8N0Y5 310 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 C15orf53Q8NAA6 179 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 OR2T35Q8NGX2 323 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 SFT2D1Q8WV19 159 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 PLEKHB2Q96CS7 222 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 NMES1Q9C002 83 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 C14orf132Q9NPU4 83 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 HLA-DRB4X5D2U9 266 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 CMYA5Q8N3K9 4069 aa2.33□□□□□ -2.04
HCFC2-204ENST00000550335 TGP01266 2768 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 IGKV3-7A0A075B6H7 116 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 SSSCA1O60232 199 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 HYPMO75409 117 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 DEFB135Q30KP9 77 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 PSMG4Q5JS54 123 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 PFDN5Q99471 154 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 RPRMQ9NS64 109 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 GSKIPQ9P0R6 139 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 PAIP2BQ9ULR5 123 aaKnown RBP2.32□□□□□ -2.04
HCFC2-204ENST00000550335 HIGD1AQ9Y241 93 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 DNAH3Q8TD57 4116 aa2.32□□□□□ -2.04
HCFC2-204ENST00000550335 IGLC2P0DOY2 106 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 PSG9Q00887 426 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 PDE6HQ13956 83 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 C10orf113Q5VZT2 155 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 PATE2Q6UY27 113 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 LINC00305Q7Z4B0 112 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 ODF3Q96PU9 254 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 MGST2Q99735 147 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 LINC00467Q9BRT7 94 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 TMEM14CQ9P0S9 112 aa2.31□□□□□ -2.04
HCFC2-204ENST00000550335 TRAV10A0A0B4J240 114 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 TRAV12-1A0A0B4J245 112 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 FAM24AA6NFZ4 105 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 A8MWV9 139 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 C17orf112F2Z3M2 114 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 CST7O76096 145 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 NMBP08949 121 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 SPART-AS1P0CW21 52 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 RAB4BP61018 213 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 RRAS2P62070 204 aaPredicted RBP2.3□□□□□ -2.04
HCFC2-204ENST00000550335 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 OR4B1Q8NGF8 309 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 TMEM254Q8TBM7 123 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 PPP1R1CQ8WVI7 109 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 LINC00052Q96N35 136 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 RETNLBQ9BQ08 111 aa2.3□□□□□ -2.04
HCFC2-204ENST00000550335 COL7A1Q02388 2944 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 IGKV2-29A2NJV5 120 aaPredicted RBP2.29□□□□□ -2.04
HCFC2-204ENST00000550335 RBAKDNA6NC62 111 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 MPC2O95563 127 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 SLC25A5P05141 298 aaKnown RBP2.29□□□□□ -2.04
HCFC2-204ENST00000550335 FGF7P21781 194 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 S100A10P60903 97 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 TMEM78Q5T7P6 136 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 GDF5OSQ5U4N7 250 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 MIC13Q5XKP0 118 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 NUP35Q8NFH5 326 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 HSPB11Q9Y547 144 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 LY96Q9Y6Y9 160 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 STAB2Q8WWQ8 2551 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 DNAH9Q9NYC9 4486 aa2.29□□□□□ -2.04
HCFC2-204ENST00000550335 TENM3Q9P273 2699 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 UBE2L5PA0A1B0GUS4 154 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 H3BNG1 76 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 H3BQ15 152 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 H7BYZ3 331 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 NBEAP1P0C6P0 100 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 SERF2P84101 59 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 TMEM263Q8WUH6 116 aaKnown RBP2.28□□□□□ -2.04
HCFC2-204ENST00000550335 FAM167A-AS1Q96KT0 104 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 AQP10Q96PS8 301 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 PSMG3Q9BT73 122 aaPredicted RBP2.28□□□□□ -2.04
HCFC2-204ENST00000550335 SLC35B3Q9H1N7 401 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 LAMTOR3Q9UHA4 124 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 APLNQ9ULZ1 77 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 LENEPQ9Y5L5 61 aa2.28□□□□□ -2.04
HCFC2-204ENST00000550335 KMT2CQ8NEZ4 4911 aaKnown RBP2.27□□□□□ -2.05
HCFC2-204ENST00000550335 DEFB131BA0A096LNP1 70 aa2.27□□□□□ -2.05
HCFC2-204ENST00000550335 TRBV6-8A0A0A6YYG3 113 aa2.27□□□□□ -2.05
HCFC2-204ENST00000550335 A0A1W2PRE2 83 aa2.27□□□□□ -2.05
HCFC2-204ENST00000550335 SIX6O95475 246 aa2.27□□□□□ -2.05
HCFC2-204ENST00000550335 LY6G6CO95867 125 aa2.27□□□□□ -2.05
HCFC2-204ENST00000550335 HIST1H1AQ02539 215 aaPredicted RBP2.27□□□□□ -2.05
HCFC2-204ENST00000550335 SPINK13Q1W4C9 94 aa2.27□□□□□ -2.05
HCFC2-204ENST00000550335 FAM74A1Q5RGS3 127 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms