RNA–Protein interactions for RNA: ENST00000547856.5

RAPGEF3-216, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,659 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-216ENST00000547856 USP24Q9UPU5 2620 aa10.05□□□□□ -0.8
RAPGEF3-216ENST00000547856 TRGV1A0A0A0MS02 117 aa10.05□□□□□ -0.8
RAPGEF3-216ENST00000547856 Q8N814 137 aa10.04□□□□□ -0.8
RAPGEF3-216ENST00000547856 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
RAPGEF3-216ENST00000547856 KLKP1Q107X0 134 aa10.04□□□□□ -0.8
RAPGEF3-216ENST00000547856 FAM208BQ5VWN6 2430 aa10.03□□□□□ -0.8
RAPGEF3-216ENST00000547856 LRRK2Q5S007 2527 aa10.03□□□□□ -0.8
RAPGEF3-216ENST00000547856 ZNF462Q96JM2 2506 aa10.03□□□□□ -0.8
RAPGEF3-216ENST00000547856 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
RAPGEF3-216ENST00000547856 TRBV6-4A0A1B0GX49 114 aa10.03□□□□□ -0.8
RAPGEF3-216ENST00000547856 TMEM256-PLSCR3K7ERE1 68 aa10.02□□□□□ -0.8
RAPGEF3-216ENST00000547856 SCXQ7RTU7 201 aa10.02□□□□□ -0.8
RAPGEF3-216ENST00000547856 LINC01547P58512 204 aaPredicted RBP10.02□□□□□ -0.81
RAPGEF3-216ENST00000547856 TM2D3Q9BRN9 247 aa10.02□□□□□ -0.81
RAPGEF3-216ENST00000547856 TRBV10-3A0A0K0K1G6 114 aa10.01□□□□□ -0.81
RAPGEF3-216ENST00000547856 FAM229BQ4G0N7 80 aa10.01□□□□□ -0.81
RAPGEF3-216ENST00000547856 B4DSR2 109 aa10.01□□□□□ -0.81
RAPGEF3-216ENST00000547856 UBE2E2Q96LR5 201 aa10.01□□□□□ -0.81
RAPGEF3-216ENST00000547856 A0A096LNT2 108 aa10□□□□□ -0.81
RAPGEF3-216ENST00000547856 K7EQD1 137 aa10□□□□□ -0.81
RAPGEF3-216ENST00000547856 IBA57-AS1B1ANH7 110 aa10□□□□□ -0.81
RAPGEF3-216ENST00000547856 C6orf226Q5I0X4 101 aa9.99□□□□□ -0.81
RAPGEF3-216ENST00000547856 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
RAPGEF3-216ENST00000547856 LAMTOR3Q9UHA4 124 aa9.99□□□□□ -0.81
RAPGEF3-216ENST00000547856 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
RAPGEF3-216ENST00000547856 KHDC1LQ5JSQ8 128 aa9.99□□□□□ -0.81
RAPGEF3-216ENST00000547856 MAPK1IP1LQ8NDC0 245 aa9.99□□□□□ -0.81
RAPGEF3-216ENST00000547856 UBR5O95071 2799 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF3-216ENST00000547856 IGLV4-60A0A075B6I1 120 aa9.98□□□□□ -0.81
RAPGEF3-216ENST00000547856 A8MTW9 85 aa9.98□□□□□ -0.81
RAPGEF3-216ENST00000547856 IGHV4-59P01825 116 aa9.98□□□□□ -0.81
RAPGEF3-216ENST00000547856 DEFB136Q30KP8 78 aa9.98□□□□□ -0.81
RAPGEF3-216ENST00000547856 Q8N3U1 123 aa9.98□□□□□ -0.81
RAPGEF3-216ENST00000547856 NANOS2P60321 138 aaKnown RBP9.97□□□□□ -0.81
RAPGEF3-216ENST00000547856 DEFB112Q30KQ8 113 aa9.97□□□□□ -0.81
RAPGEF3-216ENST00000547856 Q6ZVQ6 151 aa9.97□□□□□ -0.81
RAPGEF3-216ENST00000547856 TMEM89A2RUT3 159 aa9.97□□□□□ -0.81
RAPGEF3-216ENST00000547856 LY6G6DO95868 133 aa9.97□□□□□ -0.81
RAPGEF3-216ENST00000547856 PTPN13Q12923 2485 aa9.97□□□□□ -0.81
RAPGEF3-216ENST00000547856 ABCA12Q86UK0 2595 aa9.96□□□□□ -0.81
RAPGEF3-216ENST00000547856 Q6ZQT0 140 aa9.96□□□□□ -0.81
RAPGEF3-216ENST00000547856 ZNF843Q8N446 348 aa9.96□□□□□ -0.81
RAPGEF3-216ENST00000547856 LINC00167Q96N53 147 aa9.96□□□□□ -0.81
RAPGEF3-216ENST00000547856 TEX15Q9BXT5 2789 aa9.96□□□□□ -0.82
RAPGEF3-216ENST00000547856 MIFP14174 115 aa9.95□□□□□ -0.82
RAPGEF3-216ENST00000547856 BBC3Q96PG8 261 aaPredicted RBP9.95□□□□□ -0.82
RAPGEF3-216ENST00000547856 SLURP1P55000 103 aa9.95□□□□□ -0.82
RAPGEF3-216ENST00000547856 C6orf99Q4VX62 202 aa9.95□□□□□ -0.82
RAPGEF3-216ENST00000547856 IGHV3OR16-9A0A0B4J2B5 98 aa9.94□□□□□ -0.82
RAPGEF3-216ENST00000547856 INSP01308 110 aa9.94□□□□□ -0.82
RAPGEF3-216ENST00000547856 DSCR9P59020 149 aa9.94□□□□□ -0.82
RAPGEF3-216ENST00000547856 LINC01356Q8N9X3 169 aa9.94□□□□□ -0.82
RAPGEF3-216ENST00000547856 SPATA3Q8NHX4 192 aa9.94□□□□□ -0.82
RAPGEF3-216ENST00000547856 C18orf65Q6ZTR6 163 aa9.93□□□□□ -0.82
RAPGEF3-216ENST00000547856 TRBV10-1A0A0K0K1A3 114 aa9.92□□□□□ -0.82
RAPGEF3-216ENST00000547856 CR1P17927 2039 aa9.91□□□□□ -0.82
RAPGEF3-216ENST00000547856 CLPSL2Q6UWE3 100 aa9.91□□□□□ -0.82
RAPGEF3-216ENST00000547856 TRBV7-4A0A0J9YYF1 115 aa9.9□□□□□ -0.82
RAPGEF3-216ENST00000547856 BCE1O60756 84 aa9.9□□□□□ -0.82
RAPGEF3-216ENST00000547856 MAP6D1Q9H9H5 199 aa9.9□□□□□ -0.82
RAPGEF3-216ENST00000547856 A0A087WZ39 114 aa9.9□□□□□ -0.82
RAPGEF3-216ENST00000547856 KRTAP10-9P60411 292 aa9.9□□□□□ -0.82
RAPGEF3-216ENST00000547856 NOP10Q9NPE3 64 aaKnown RBP9.9□□□□□ -0.82
RAPGEF3-216ENST00000547856 NAV2Q8IVL1 2488 aa9.9□□□□□ -0.82
RAPGEF3-216ENST00000547856 NREPQ16612 68 aa9.89□□□□□ -0.83
RAPGEF3-216ENST00000547856 IL17DQ8TAD2 202 aa9.89□□□□□ -0.83
RAPGEF3-216ENST00000547856 TMEM254Q8TBM7 123 aa9.89□□□□□ -0.83
RAPGEF3-216ENST00000547856 EPG5Q9HCE0 2579 aa9.89□□□□□ -0.83
RAPGEF3-216ENST00000547856 ZNF469Q96JG9 3925 aaPredicted RBP9.89□□□□□ -0.83
RAPGEF3-216ENST00000547856 NDUFC1O43677 76 aa9.89□□□□□ -0.83
RAPGEF3-216ENST00000547856 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
RAPGEF3-216ENST00000547856 C9orf116Q5BN46 136 aaPredicted RBP9.88□□□□□ -0.83
RAPGEF3-216ENST00000547856 Q8N9L7 120 aa9.88□□□□□ -0.83
RAPGEF3-216ENST00000547856 C1orf158Q8N1D5 194 aa9.88□□□□□ -0.83
RAPGEF3-216ENST00000547856 APCP25054 2843 aa9.87□□□□□ -0.83
RAPGEF3-216ENST00000547856 DAD1P61803 113 aa9.87□□□□□ -0.83
RAPGEF3-216ENST00000547856 TRGV2A0A075B6R0 118 aa9.87□□□□□ -0.83
RAPGEF3-216ENST00000547856 ZNF561-AS1K7EIQ3 104 aa9.87□□□□□ -0.83
RAPGEF3-216ENST00000547856 PLA2G2AP14555 144 aa9.86□□□□□ -0.83
RAPGEF3-216ENST00000547856 LINC00575Q6W349 94 aa9.86□□□□□ -0.83
RAPGEF3-216ENST00000547856 NBPF19A0A087WUL8 3843 aa9.86□□□□□ -0.83
RAPGEF3-216ENST00000547856 Q8NDZ9 215 aa9.86□□□□□ -0.83
RAPGEF3-216ENST00000547856 MYO9AB2RTY4 2548 aa9.86□□□□□ -0.83
RAPGEF3-216ENST00000547856 TLN2Q9Y4G6 2542 aa9.86□□□□□ -0.83
RAPGEF3-216ENST00000547856 BPY2O14599 106 aa9.85□□□□□ -0.83
RAPGEF3-216ENST00000547856 IGHV4-31P0DP07 118 aa9.85□□□□□ -0.83
RAPGEF3-216ENST00000547856 AKAP9Q99996 3911 aa9.85□□□□□ -0.83
RAPGEF3-216ENST00000547856 LOC110117498A0A087WWA1 95 aa9.85□□□□□ -0.83
RAPGEF3-216ENST00000547856 LINC00959A0A1B0GUT2 108 aa9.85□□□□□ -0.83
RAPGEF3-216ENST00000547856 FSHBP01225 129 aa9.85□□□□□ -0.83
RAPGEF3-216ENST00000547856 Q6YL49 198 aa9.84□□□□□ -0.83
RAPGEF3-216ENST00000547856 Q6ZQY7 126 aa9.84□□□□□ -0.83
RAPGEF3-216ENST00000547856 DYNLRB2Q8TF09 96 aa9.84□□□□□ -0.83
RAPGEF3-216ENST00000547856 ATP5EP56381 51 aaPredicted RBP9.84□□□□□ -0.83
RAPGEF3-216ENST00000547856 CXCL6P80162 114 aa9.84□□□□□ -0.83
RAPGEF3-216ENST00000547856 ZNF702PQ9H963 129 aa9.84□□□□□ -0.83
RAPGEF3-216ENST00000547856 C6orf223Q8N319 242 aa9.83□□□□□ -0.84
RAPGEF3-216ENST00000547856 TRGV4A0A0C4DH28 118 aa9.82□□□□□ -0.84
RAPGEF3-216ENST00000547856 ESRGQ1W209 222 aa9.82□□□□□ -0.84
RAPGEF3-216ENST00000547856 STHQ8IWL8 128 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms