RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 A0A0J9YXV3 536 aa7.48□□□□□ -1.21
RAB5C-204ENST00000547517 LOC107984640A0A0U1RRK4 108 aa7.48□□□□□ -1.21
RAB5C-204ENST00000547517 LINC00587B1AMM8 73 aa7.48□□□□□ -1.21
RAB5C-204ENST00000547517 NDUFA1O15239 70 aa7.48□□□□□ -1.21
RAB5C-204ENST00000547517 PTTG1IPP53801 180 aa7.48□□□□□ -1.21
RAB5C-204ENST00000547517 RPL18AQ02543 176 aaKnown RBP7.48□□□□□ -1.21
RAB5C-204ENST00000547517 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
RAB5C-204ENST00000547517 LINC00474Q9P2X8 69 aa7.48□□□□□ -1.21
RAB5C-204ENST00000547517 LINC01549A6NIU2 74 aa7.47□□□□□ -1.21
RAB5C-204ENST00000547517 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.47□□□□□ -1.21
RAB5C-204ENST00000547517 HERVK_113P63121 156 aa7.47□□□□□ -1.21
RAB5C-204ENST00000547517 C10orf25Q5T742 122 aa7.47□□□□□ -1.21
RAB5C-204ENST00000547517 URB1-AS1Q96HZ7 61 aa7.47□□□□□ -1.21
RAB5C-204ENST00000547517 GEMIN7Q9H840 131 aaKnown RBP7.47□□□□□ -1.21
RAB5C-204ENST00000547517 MRPL35Q9NZE8 188 aaKnown RBP7.47□□□□□ -1.21
RAB5C-204ENST00000547517 FLG2Q5D862 2391 aaPredicted RBP7.46□□□□□ -1.21
RAB5C-204ENST00000547517 F8WDY8 70 aa7.46□□□□□ -1.22
RAB5C-204ENST00000547517 SEC11AP67812 179 aa7.46□□□□□ -1.22
RAB5C-204ENST00000547517 PMCHL1Q16048 86 aa7.46□□□□□ -1.22
RAB5C-204ENST00000547517 UNQ6190/PRO20217Q6UXQ8 127 aa7.46□□□□□ -1.22
RAB5C-204ENST00000547517 FAM19A3Q7Z5A8 133 aa7.46□□□□□ -1.22
RAB5C-204ENST00000547517 LINC01561Q8N1V8 128 aa7.46□□□□□ -1.22
RAB5C-204ENST00000547517 A0A096LNJ9 63 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 LINC00614P0C842 121 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 DDTP30046 118 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 KIAA0087Q14695 138 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 PDZD11Q5EBL8 140 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 LINC00469Q8N7U9 141 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 C7orf33Q8WU49 177 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 TOMM7Q9P0U1 55 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 C6orf48Q9UBA6 75 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 CDKN2A-AS1Q9UH64 79 aa7.45□□□□□ -1.22
RAB5C-204ENST00000547517 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
RAB5C-204ENST00000547517 HBDP02042 147 aa7.44□□□□□ -1.22
RAB5C-204ENST00000547517 PRSS2P07478 247 aa7.44□□□□□ -1.22
RAB5C-204ENST00000547517 PMVKQ15126 192 aa7.44□□□□□ -1.22
RAB5C-204ENST00000547517 RNF151Q2KHN1 245 aa7.44□□□□□ -1.22
RAB5C-204ENST00000547517 C2orf82Q6UX34 121 aa7.44□□□□□ -1.22
RAB5C-204ENST00000547517 CST9LQ9H4G1 147 aa7.44□□□□□ -1.22
RAB5C-204ENST00000547517 HERC1Q15751 4861 aa7.44□□□□□ -1.22
RAB5C-204ENST00000547517 TINCRA0A1B0GVN0 87 aa7.43□□□□□ -1.22
RAB5C-204ENST00000547517 HNRNPA3P51991 378 aaKnown RBP7.43□□□□□ -1.22
RAB5C-204ENST00000547517 BAGE3Q86Y29 109 aa7.43□□□□□ -1.22
RAB5C-204ENST00000547517 CKS1BP61024 79 aa7.42□□□□□ -1.22
RAB5C-204ENST00000547517 Q8IZM0 81 aa7.42□□□□□ -1.22
RAB5C-204ENST00000547517 TRBV30A0A0K0K1B3 111 aa7.41□□□□□ -1.22
RAB5C-204ENST00000547517 A0A1W2PNN7 141 aa7.41□□□□□ -1.22
RAB5C-204ENST00000547517 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
RAB5C-204ENST00000547517 SCGB1D1O95968 90 aa7.41□□□□□ -1.22
RAB5C-204ENST00000547517 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
RAB5C-204ENST00000547517 Q6ZRP5 223 aa7.41□□□□□ -1.22
RAB5C-204ENST00000547517 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.22
RAB5C-204ENST00000547517 SPINK8P0C7L1 97 aa7.4□□□□□ -1.22
RAB5C-204ENST00000547517 TLX1NBP0CAT3 122 aa7.4□□□□□ -1.22
RAB5C-204ENST00000547517 PRR3P79522 188 aaKnown RBP7.4□□□□□ -1.22
RAB5C-204ENST00000547517 GAGE2EQ4V326 116 aa7.4□□□□□ -1.22
RAB5C-204ENST00000547517 C6orf226Q5I0X4 101 aa7.4□□□□□ -1.22
RAB5C-204ENST00000547517 GAGE2DQ9UEU5 116 aa7.4□□□□□ -1.22
RAB5C-204ENST00000547517 FAT3Q8TDW7 4589 aa7.4□□□□□ -1.23
RAB5C-204ENST00000547517 J3QL48 77 aa7.39□□□□□ -1.23
RAB5C-204ENST00000547517 ATP5LO75964 103 aa7.39□□□□□ -1.23
RAB5C-204ENST00000547517 CHCHD1Q96BP2 118 aaKnown RBP7.39□□□□□ -1.23
RAB5C-204ENST00000547517 LRP1Q07954 4544 aaKnown RBP7.39□□□□□ -1.23
RAB5C-204ENST00000547517 FAM168BA1KXE4 195 aa7.38□□□□□ -1.23
RAB5C-204ENST00000547517 NDUFC2-KCTD14E9PQ53 114 aa7.38□□□□□ -1.23
RAB5C-204ENST00000547517 H3BRM9 83 aa7.38□□□□□ -1.23
RAB5C-204ENST00000547517 IGLC3P0DOY3 106 aa7.38□□□□□ -1.23
RAB5C-204ENST00000547517 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
RAB5C-204ENST00000547517 C20orf202A1L168 122 aa7.37□□□□□ -1.23
RAB5C-204ENST00000547517 F8VRH5 84 aa7.37□□□□□ -1.23
RAB5C-204ENST00000547517 HSBP1O75506 76 aa7.37□□□□□ -1.23
RAB5C-204ENST00000547517 CXCL5P42830 114 aa7.37□□□□□ -1.23
RAB5C-204ENST00000547517 PHF5AQ7RTV0 110 aaKnown RBP7.37□□□□□ -1.23
RAB5C-204ENST00000547517 FAM19A5Q7Z5A7 132 aaPredicted RBP7.37□□□□□ -1.23
RAB5C-204ENST00000547517 COX7B2Q8TF08 81 aa7.37□□□□□ -1.23
RAB5C-204ENST00000547517 C14orf144Q96I85 54 aa7.37□□□□□ -1.23
RAB5C-204ENST00000547517 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
RAB5C-204ENST00000547517 SERF1AO75920 110 aa7.36□□□□□ -1.23
RAB5C-204ENST00000547517 ZNF22P17026 224 aaPredicted RBP7.36□□□□□ -1.23
RAB5C-204ENST00000547517 VAMP8Q9BV40 100 aa7.36□□□□□ -1.23
RAB5C-204ENST00000547517 M0R143 59 aa7.35□□□□□ -1.23
RAB5C-204ENST00000547517 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
RAB5C-204ENST00000547517 FAM19A2Q8N3H0 131 aa7.35□□□□□ -1.23
RAB5C-204ENST00000547517 C11orf86A6NJI1 115 aa7.34□□□□□ -1.23
RAB5C-204ENST00000547517 IFI27L1Q96BM0 104 aa7.34□□□□□ -1.23
RAB5C-204ENST00000547517 PRO1933Q9H354 126 aa7.34□□□□□ -1.23
RAB5C-204ENST00000547517 CHTOPQ9Y3Y2 248 aaKnown RBP7.34□□□□□ -1.23
RAB5C-204ENST00000547517 M0QXV9 152 aa7.33□□□□□ -1.24
RAB5C-204ENST00000547517 OXTP01178 125 aa7.33□□□□□ -1.24
RAB5C-204ENST00000547517 LINC00310P59036 64 aa7.33□□□□□ -1.24
RAB5C-204ENST00000547517 TMEM170BQ5T4T1 132 aa7.33□□□□□ -1.24
RAB5C-204ENST00000547517 MIEN1Q9BRT3 115 aa7.33□□□□□ -1.24
RAB5C-204ENST00000547517 XAGE1AQ9HD64 81 aa7.33□□□□□ -1.24
RAB5C-204ENST00000547517 IGLV5-39A0A0G2JS06 123 aa7.32□□□□□ -1.24
RAB5C-204ENST00000547517 KRTAP7-1Q8IUC3 87 aa7.32□□□□□ -1.24
RAB5C-204ENST00000547517 PSORS1C2Q9UIG4 136 aa7.32□□□□□ -1.24
RAB5C-204ENST00000547517 TRAV12-1A0A0B4J245 112 aa7.31□□□□□ -1.24
RAB5C-204ENST00000547517 H0Y8G0 127 aa7.31□□□□□ -1.24
RAB5C-204ENST00000547517 SERTAD4-AS1Q5TG53 156 aa7.31□□□□□ -1.24
RAB5C-204ENST00000547517 KRTDAPP60985 99 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms