RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 DEFB113Q30KQ7 82 aa9.28□□□□□ -0.92
PTCH1-212ENST00000546744 C22orf34Q6ZV56 151 aa9.28□□□□□ -0.92
PTCH1-212ENST00000546744 hDV103S1A0JD37 113 aa9.27□□□□□ -0.93
PTCH1-212ENST00000546744 F8WDY8 70 aa9.27□□□□□ -0.93
PTCH1-212ENST00000546744 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.93
PTCH1-212ENST00000546744 Q6ZVQ6 151 aa9.27□□□□□ -0.93
PTCH1-212ENST00000546744 MAPK1IP1LQ8NDC0 245 aa9.27□□□□□ -0.93
PTCH1-212ENST00000546744 IGLV5-39A0A0G2JS06 123 aa9.27□□□□□ -0.93
PTCH1-212ENST00000546744 A0A087WYN8 130 aa9.26□□□□□ -0.93
PTCH1-212ENST00000546744 BEAN1Q3B7T3 259 aa9.26□□□□□ -0.93
PTCH1-212ENST00000546744 WFDC10AQ9H1F0 79 aa9.26□□□□□ -0.93
PTCH1-212ENST00000546744 LELP1Q5T871 98 aa9.26□□□□□ -0.93
PTCH1-212ENST00000546744 C11orf71Q6IPW1 123 aa9.26□□□□□ -0.93
PTCH1-212ENST00000546744 KIF25-AS1Q9Y6Z4 181 aa9.26□□□□□ -0.93
PTCH1-212ENST00000546744 Q6YL49 198 aa9.26□□□□□ -0.93
PTCH1-212ENST00000546744 F8W735 103 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-212ENST00000546744 EGFEM1PQ0D2K5 195 aa9.25□□□□□ -0.93
PTCH1-212ENST00000546744 CASC2Q6XLA1 102 aa9.25□□□□□ -0.93
PTCH1-212ENST00000546744 XAGE1AQ9HD64 81 aa9.25□□□□□ -0.93
PTCH1-212ENST00000546744 MYO15AQ9UKN7 3530 aa9.25□□□□□ -0.93
PTCH1-212ENST00000546744 LINC01547P58512 204 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-212ENST00000546744 EPG5Q9HCE0 2579 aa9.25□□□□□ -0.93
PTCH1-212ENST00000546744 WFDC10BQ8IUB3 73 aa9.24□□□□□ -0.93
PTCH1-212ENST00000546744 DEFB135Q30KP9 77 aa9.24□□□□□ -0.93
PTCH1-212ENST00000546744 HIGD2AQ9BW72 106 aa9.24□□□□□ -0.93
PTCH1-212ENST00000546744 USP34Q70CQ2 3546 aa9.24□□□□□ -0.93
PTCH1-212ENST00000546744 FAM19A1Q7Z5A9 133 aa9.24□□□□□ -0.93
PTCH1-212ENST00000546744 MUC3AQ02505 3323 aa9.23□□□□□ -0.93
PTCH1-212ENST00000546744 LINC00575Q6W349 94 aa9.22□□□□□ -0.93
PTCH1-212ENST00000546744 HIVEP3Q5T1R4 2406 aa9.22□□□□□ -0.93
PTCH1-212ENST00000546744 IGLV5-45A0A087WSX0 123 aa9.21□□□□□ -0.93
PTCH1-212ENST00000546744 PKD1L2Q7Z442 2459 aa9.21□□□□□ -0.93
PTCH1-212ENST00000546744 CELA1Q9UNI1 258 aa9.21□□□□□ -0.93
PTCH1-212ENST00000546744 MGAQ8IWI9 3026 aa9.21□□□□□ -0.93
PTCH1-212ENST00000546744 WFDC13Q8IUB5 93 aa9.21□□□□□ -0.94
PTCH1-212ENST00000546744 PLAC8L1A1L4L8 177 aa9.21□□□□□ -0.94
PTCH1-212ENST00000546744 Q6ZSV7 163 aa9.21□□□□□ -0.94
PTCH1-212ENST00000546744 AKAP13Q12802 2813 aa9.2□□□□□ -0.94
PTCH1-212ENST00000546744 A0A1B0GUV1 79 aa9.2□□□□□ -0.94
PTCH1-212ENST00000546744 FAM30AQ9NZY2 134 aa9.2□□□□□ -0.94
PTCH1-212ENST00000546744 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
PTCH1-212ENST00000546744 RETNQ9HD89 108 aa9.19□□□□□ -0.94
PTCH1-212ENST00000546744 ESM1Q9NQ30 184 aa9.19□□□□□ -0.94
PTCH1-212ENST00000546744 JMJD1CQ15652 2540 aa9.19□□□□□ -0.94
PTCH1-212ENST00000546744 C1orf137Q5JT78 98 aa9.19□□□□□ -0.94
PTCH1-212ENST00000546744 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
PTCH1-212ENST00000546744 ZNF706Q9Y5V0 76 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-212ENST00000546744 FLNBO75369 2602 aaKnown RBP9.18□□□□□ -0.94
PTCH1-212ENST00000546744 CYSRT1A8MQ03 144 aa9.18□□□□□ -0.94
PTCH1-212ENST00000546744 ERC2-IT1O76042 136 aa9.18□□□□□ -0.94
PTCH1-212ENST00000546744 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
PTCH1-212ENST00000546744 DSCAMO60469 2012 aa9.17□□□□□ -0.94
PTCH1-212ENST00000546744 COX6A2Q02221 97 aa9.17□□□□□ -0.94
PTCH1-212ENST00000546744 H3BPC8 53 aa9.17□□□□□ -0.94
PTCH1-212ENST00000546744 PRR4Q16378 134 aa9.17□□□□□ -0.94
PTCH1-212ENST00000546744 C4orf26Q17RF5 130 aa9.15□□□□□ -0.94
PTCH1-212ENST00000546744 NAV2Q8IVL1 2488 aa9.15□□□□□ -0.94
PTCH1-212ENST00000546744 LINC00315P59091 139 aa9.15□□□□□ -0.95
PTCH1-212ENST00000546744 CFAP54Q96N23 3096 aa9.15□□□□□ -0.95
PTCH1-212ENST00000546744 LOC110117498A0A087WWA1 95 aa9.14□□□□□ -0.95
PTCH1-212ENST00000546744 ZNF843Q8N446 348 aa9.14□□□□□ -0.95
PTCH1-212ENST00000546744 BBC3Q96PG8 261 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-212ENST00000546744 CELSR3Q9NYQ7 3312 aa9.14□□□□□ -0.95
PTCH1-212ENST00000546744 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
PTCH1-212ENST00000546744 HILS1P60008 231 aa9.13□□□□□ -0.95
PTCH1-212ENST00000546744 DNAJC9-AS1A6NH13 148 aa9.13□□□□□ -0.95
PTCH1-212ENST00000546744 PSPHP1O15172 72 aa9.13□□□□□ -0.95
PTCH1-212ENST00000546744 CDSNQ15517 529 aa9.13□□□□□ -0.95
PTCH1-212ENST00000546744 MYO9AB2RTY4 2548 aa9.13□□□□□ -0.95
PTCH1-212ENST00000546744 LRRK2Q5S007 2527 aa9.12□□□□□ -0.95
PTCH1-212ENST00000546744 ZNF702PQ9H963 129 aa9.12□□□□□ -0.95
PTCH1-212ENST00000546744 HIVEP2P31629 2446 aa9.12□□□□□ -0.95
PTCH1-212ENST00000546744 DMXL1Q9Y485 3027 aa9.12□□□□□ -0.95
PTCH1-212ENST00000546744 NHLRC4P0CG21 123 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-212ENST00000546744 FAM19A4Q96LR4 140 aa9.11□□□□□ -0.95
PTCH1-212ENST00000546744 C2orf48Q96LS8 159 aa9.11□□□□□ -0.95
PTCH1-212ENST00000546744 UNQ6190/PRO20217Q6UXQ8 127 aa9.1□□□□□ -0.95
PTCH1-212ENST00000546744 TET2Q6N021 2002 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-212ENST00000546744 TLN2Q9Y4G6 2542 aa9.1□□□□□ -0.95
PTCH1-212ENST00000546744 C11orf45Q8TAV5 145 aa9.1□□□□□ -0.95
PTCH1-212ENST00000546744 DOPEY1Q5JWR5 2465 aa9.1□□□□□ -0.95
PTCH1-212ENST00000546744 IGKV2-28A0A075B6P5 120 aa9.09□□□□□ -0.95
PTCH1-212ENST00000546744 WIPF1O43516 503 aa9.09□□□□□ -0.95
PTCH1-212ENST00000546744 IGKV2D-28P01615 120 aa9.09□□□□□ -0.95
PTCH1-212ENST00000546744 FREM2Q5SZK8 3169 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 C19orf84I3L1E1 186 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 IGHV3OR16-9A0A0B4J2B5 98 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 H0Y9P7 68 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 DEFB4AO15263 64 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 ODF3L2Q3SX64 289 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 C6orf223Q8N319 242 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 IGKV2-24A0A0C4DH68 120 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
PTCH1-212ENST00000546744 IGLV4-60A0A075B6I1 120 aa9.07□□□□□ -0.96
PTCH1-212ENST00000546744 KLKP1Q107X0 134 aa9.07□□□□□ -0.96
PTCH1-212ENST00000546744 LRCOL1A6NCL2 159 aa9.07□□□□□ -0.96
PTCH1-212ENST00000546744 DMDP11532 3685 aa9.07□□□□□ -0.96
PTCH1-212ENST00000546744 IGHV4-31P0DP07 118 aa9.06□□□□□ -0.96
PTCH1-212ENST00000546744 Q8N2B8 174 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms