RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 NDUFB6O95139 128 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 STAG3L2P0CL84 134 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 STAG3L3P0CL85 134 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 ZNF25P17030 456 aaPredicted RBP1.23□□□□□ -2.21
SNHG1-224ENST00000545688 RPL28P46779 137 aaKnown RBP1.23□□□□□ -2.21
SNHG1-224ENST00000545688 XCL1P47992 114 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 NKX2-5P52952 324 aaPredicted RBP1.23□□□□□ -2.21
SNHG1-224ENST00000545688 TAS2R45P59539 299 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 RPS29P62273 56 aaKnown RBP1.23□□□□□ -2.21
SNHG1-224ENST00000545688 HBG1P69891 147 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 HBG2P69892 147 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 RPL18AQ02543 176 aaKnown RBP1.23□□□□□ -2.21
SNHG1-224ENST00000545688 ZNF56Q15929 161 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 MRPL52Q86TS9 123 aaKnown RBP1.23□□□□□ -2.21
SNHG1-224ENST00000545688 OR2D3Q8NGH3 330 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 MCFD2Q8NI22 146 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 IMMP2LQ96T52 175 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 NIT2Q9NQR4 276 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 CDC42SE2Q9NRR3 84 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 MCUBQ9NWR8 336 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 C6orf48Q9UBA6 75 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 TP73-AS1Q9UF72 201 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 IGHV3OR16-9A0A0B4J2B5 98 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 IGKV3OR2-268A0A0C4DH90 116 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 A0A1W2PRE2 83 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 COX7A2LO14548 114 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 NCR2O95944 276 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 SPINK1P00995 79 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 LTAP01374 205 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 IGLC6P0CF74 106 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 BCAP31P51572 246 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 TMEM241Q24JQ0 296 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 RASL11AQ6T310 242 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 FAM19A5Q7Z5A7 132 aaPredicted RBP1.22□□□□□ -2.21
SNHG1-224ENST00000545688 Q86TA4 180 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 C3orf22Q8N5N4 141 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 KCNIP2Q9NS61 270 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 LINC00846Q9NV44 126 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 ZFP30Q9Y2G7 519 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 C22orf24Q9Y442 160 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 CSDC2Q9Y534 153 aaKnown RBP1.22□□□□□ -2.21
SNHG1-224ENST00000545688 V9GYH0 126 aa1.22□□□□□ -2.21
SNHG1-224ENST00000545688 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.21□□□□□ -2.22
SNHG1-224ENST00000545688 TMSB15BA0A087X1C1 80 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 IGKV2D-26A0A0A0MRZ7 120 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 MUC21A0A140T8X8 626 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 IGKV2-29A2NJV5 120 aaPredicted RBP1.21□□□□□ -2.22
SNHG1-224ENST00000545688 C1orf196B1AJZ1 125 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 C17orf112F2Z3M2 114 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 UBE2L6O14933 153 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 GCHFRP30047 84 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 FAUP35544 74 aaKnown RBP1.21□□□□□ -2.22
SNHG1-224ENST00000545688 AP3S2P59780 193 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 UBE2BP63146 152 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 SPAG11BQ08648 103 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 COTL1Q14019 142 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 UNQ6190/PRO20217Q6UXQ8 127 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 STX12Q86Y82 276 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 DAND5Q8N907 189 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 OR10D4PQ8NGN7 298 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 PLEKHB2Q96CS7 222 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 PACRGQ96M98 296 aaPredicted RBP1.21□□□□□ -2.22
SNHG1-224ENST00000545688 FAM210AQ96ND0 272 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 AP1S3Q96PC3 154 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 CNFNQ9BYD5 112 aa1.21□□□□□ -2.22
SNHG1-224ENST00000545688 MRPS26Q9BYN8 205 aaKnown RBP1.21□□□□□ -2.22
SNHG1-224ENST00000545688 LSM5Q9Y4Y9 91 aaKnown RBP1.21□□□□□ -2.22
SNHG1-224ENST00000545688 A0A087WXM4 84 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 TRBV6-5A0A0K0K1A5 114 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 TRBV30A0A0K0K1B3 111 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 XKRY2A2RUG3 117 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 NDUFA1O15239 70 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 HMGB3O15347 200 aaKnown RBP1.2□□□□□ -2.22
SNHG1-224ENST00000545688 RGS5O15539 181 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 ZNF73O43830 326 aaPredicted RBP1.2□□□□□ -2.22
SNHG1-224ENST00000545688 UPK1BO75841 260 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 SCO1O75880 301 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 PVALBP20472 110 aaPredicted RBP1.2□□□□□ -2.22
SNHG1-224ENST00000545688 CDC34P49427 236 aaPredicted RBP1.2□□□□□ -2.22
SNHG1-224ENST00000545688 POLR2KP53803 58 aaKnown RBP1.2□□□□□ -2.22
SNHG1-224ENST00000545688 FOXA3P55318 350 aaPredicted RBP1.2□□□□□ -2.22
SNHG1-224ENST00000545688 UBE2G2P60604 165 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 SPANXN1Q5VSR9 72 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 RNASEKQ6P5S7 137 aaKnown RBP1.2□□□□□ -2.22
SNHG1-224ENST00000545688 C5orf38Q86SI9 138 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 TOMM5Q8N4H5 51 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 GATD1Q8NB37 220 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 HIST1H2BAQ96A08 127 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 FMC1Q96HJ9 113 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 VCX3BQ9H321 246 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 TMEM167BQ9NRX6 74 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
SNHG1-224ENST00000545688 TRBV27A0A0K0K1C4 114 aa1.19□□□□□ -2.22
SNHG1-224ENST00000545688 NAP1L6A6NFF2 107 aa1.19□□□□□ -2.22
SNHG1-224ENST00000545688 ZNF727A8MUV8 499 aa1.19□□□□□ -2.22
SNHG1-224ENST00000545688 SMIM17P0DL12 118 aa1.19□□□□□ -2.22
SNHG1-224ENST00000545688 KRTAP25-1Q3LHN0 102 aa1.19□□□□□ -2.22
SNHG1-224ENST00000545688 COX6B2Q6YFQ2 88 aa1.19□□□□□ -2.22
SNHG1-224ENST00000545688 FAM19A2Q8N3H0 131 aa1.19□□□□□ -2.22
SNHG1-224ENST00000545688 KRTAP2-1Q9BYU5 128 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms