RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 SMR3BP02814 79 aaPredicted RBP7.73□□□□□ -1.17
LTBR-214ENST00000545445 CNBPP62633 177 aaKnown RBP7.73□□□□□ -1.17
LTBR-214ENST00000545445 C2orf48Q96LS8 159 aa7.73□□□□□ -1.17
LTBR-214ENST00000545445 TMA7Q9Y2S6 64 aaKnown RBP7.73□□□□□ -1.17
LTBR-214ENST00000545445 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.72□□□□□ -1.17
LTBR-214ENST00000545445 SMIM1B2RUZ4 78 aa7.72□□□□□ -1.17
LTBR-214ENST00000545445 IGKCP01834 107 aa7.72□□□□□ -1.17
LTBR-214ENST00000545445 PRSS2P07478 247 aa7.72□□□□□ -1.17
LTBR-214ENST00000545445 SPAG11BQ08648 103 aa7.72□□□□□ -1.17
LTBR-214ENST00000545445 HIGD2BQ4VC39 106 aa7.72□□□□□ -1.17
LTBR-214ENST00000545445 Q8IZM0 81 aa7.72□□□□□ -1.17
LTBR-214ENST00000545445 KRTAP10-1P60331 282 aa7.71□□□□□ -1.18
LTBR-214ENST00000545445 HAMPP81172 84 aa7.71□□□□□ -1.18
LTBR-214ENST00000545445 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.7□□□□□ -1.18
LTBR-214ENST00000545445 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
LTBR-214ENST00000545445 IGLV5-39A0A0G2JS06 123 aa7.7□□□□□ -1.18
LTBR-214ENST00000545445 TMEM223A0PJW6 202 aa7.7□□□□□ -1.18
LTBR-214ENST00000545445 SPINK8P0C7L1 97 aa7.7□□□□□ -1.18
LTBR-214ENST00000545445 CXCL5P42830 114 aa7.7□□□□□ -1.18
LTBR-214ENST00000545445 HERVK_113P61574 105 aa7.7□□□□□ -1.18
LTBR-214ENST00000545445 KIAA0087Q14695 138 aa7.7□□□□□ -1.18
LTBR-214ENST00000545445 C6orf226Q5I0X4 101 aa7.7□□□□□ -1.18
LTBR-214ENST00000545445 PMCHL2Q9BQD1 86 aa7.7□□□□□ -1.18
LTBR-214ENST00000545445 DNAH8Q96JB1 4490 aa7.69□□□□□ -1.18
LTBR-214ENST00000545445 SYCNQ0VAF6 134 aa7.69□□□□□ -1.18
LTBR-214ENST00000545445 SFTA2Q6UW10 78 aa7.69□□□□□ -1.18
LTBR-214ENST00000545445 COX7B2Q8TF08 81 aa7.69□□□□□ -1.18
LTBR-214ENST00000545445 CAMK2N2Q96S95 79 aa7.69□□□□□ -1.18
LTBR-214ENST00000545445 TOMM7Q9P0U1 55 aa7.69□□□□□ -1.18
LTBR-214ENST00000545445 PKIGQ9Y2B9 76 aa7.69□□□□□ -1.18
LTBR-214ENST00000545445 NDUFA1O15239 70 aa7.68□□□□□ -1.18
LTBR-214ENST00000545445 CKS1BP61024 79 aa7.68□□□□□ -1.18
LTBR-214ENST00000545445 RNF151Q2KHN1 245 aa7.68□□□□□ -1.18
LTBR-214ENST00000545445 C9orf163Q8N9P6 203 aa7.68□□□□□ -1.18
LTBR-214ENST00000545445 CARD19Q96LW7 228 aa7.68□□□□□ -1.18
LTBR-214ENST00000545445 FAM229AH3BQW9 127 aa7.67□□□□□ -1.18
LTBR-214ENST00000545445 SLPIP03973 132 aa7.67□□□□□ -1.18
LTBR-214ENST00000545445 LINC00526Q96FQ7 95 aa7.67□□□□□ -1.18
LTBR-214ENST00000545445 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
LTBR-214ENST00000545445 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
LTBR-214ENST00000545445 GCSHP23434 173 aa7.66□□□□□ -1.18
LTBR-214ENST00000545445 PLEKHB2Q96CS7 222 aa7.66□□□□□ -1.18
LTBR-214ENST00000545445 Q6ZRU5 148 aa7.65□□□□□ -1.18
LTBR-214ENST00000545445 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.18
LTBR-214ENST00000545445 E9PLD3 99 aa7.64□□□□□ -1.19
LTBR-214ENST00000545445 LEPROTO15243 131 aa7.64□□□□□ -1.19
LTBR-214ENST00000545445 SCGB1D1O95968 90 aa7.64□□□□□ -1.19
LTBR-214ENST00000545445 UNQ6190/PRO20217Q6UXQ8 127 aa7.64□□□□□ -1.19
LTBR-214ENST00000545445 C2orf82Q6UX34 121 aa7.63□□□□□ -1.19
LTBR-214ENST00000545445 HSBP1L1C9JCN9 74 aa7.62□□□□□ -1.19
LTBR-214ENST00000545445 J3QQQ9 107 aa7.62□□□□□ -1.19
LTBR-214ENST00000545445 NMUP48645 174 aa7.62□□□□□ -1.19
LTBR-214ENST00000545445 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
LTBR-214ENST00000545445 C6orf48Q9UBA6 75 aa7.62□□□□□ -1.19
LTBR-214ENST00000545445 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
LTBR-214ENST00000545445 MYMXA0A1B0GTQ4 84 aa7.61□□□□□ -1.19
LTBR-214ENST00000545445 KRTAP29-1A8MX34 341 aaPredicted RBP7.61□□□□□ -1.19
LTBR-214ENST00000545445 LINC00587B1AMM8 73 aa7.61□□□□□ -1.19
LTBR-214ENST00000545445 TLX1NBP0CAT3 122 aa7.61□□□□□ -1.19
LTBR-214ENST00000545445 LGALS3P17931 250 aaKnown RBP7.61□□□□□ -1.19
LTBR-214ENST00000545445 HERV-K104P63124 156 aa7.61□□□□□ -1.19
LTBR-214ENST00000545445 JOSD1Q15040 202 aaPredicted RBP7.61□□□□□ -1.19
LTBR-214ENST00000545445 SDIM1Q6ZPB5 146 aa7.61□□□□□ -1.19
LTBR-214ENST00000545445 STPG4Q8N801 248 aa7.61□□□□□ -1.19
LTBR-214ENST00000545445 ZNF625Q96I27 306 aaPredicted RBP7.61□□□□□ -1.19
LTBR-214ENST00000545445 NDUFA12Q9UI09 145 aa7.61□□□□□ -1.19
LTBR-214ENST00000545445 SERTAD4-AS1Q5TG53 156 aa7.6□□□□□ -1.19
LTBR-214ENST00000545445 ATOH7Q8N100 152 aa7.6□□□□□ -1.19
LTBR-214ENST00000545445 LINC00474Q9P2X8 69 aa7.6□□□□□ -1.19
LTBR-214ENST00000545445 NDUFC2-KCTD14E9PQ53 114 aa7.59□□□□□ -1.19
LTBR-214ENST00000545445 COX17Q14061 63 aa7.59□□□□□ -1.19
LTBR-214ENST00000545445 RNF213Q63HN8 5207 aa7.59□□□□□ -1.19
LTBR-214ENST00000545445 TSPEAR-AS2P59090 65 aa7.58□□□□□ -1.2
LTBR-214ENST00000545445 LINC01620Q4KN68 170 aa7.58□□□□□ -1.2
LTBR-214ENST00000545445 PLA2G2DQ9UNK4 145 aa7.58□□□□□ -1.2
LTBR-214ENST00000545445 RPL18AQ02543 176 aaKnown RBP7.57□□□□□ -1.2
LTBR-214ENST00000545445 Q6ZSA8 131 aa7.57□□□□□ -1.2
LTBR-214ENST00000545445 ERG28Q9UKR5 140 aa7.57□□□□□ -1.2
LTBR-214ENST00000545445 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
LTBR-214ENST00000545445 PTTG1IPP53801 180 aa7.56□□□□□ -1.2
LTBR-214ENST00000545445 CIRBPQ14011 172 aaKnown RBP7.56□□□□□ -1.2
LTBR-214ENST00000545445 ANKRD39Q53RE8 183 aa7.56□□□□□ -1.2
LTBR-214ENST00000545445 C9orf116Q5BN46 136 aaPredicted RBP7.56□□□□□ -1.2
LTBR-214ENST00000545445 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
LTBR-214ENST00000545445 Q6ZRP5 223 aa7.55□□□□□ -1.2
LTBR-214ENST00000545445 A0A096LNI7 61 aa7.54□□□□□ -1.2
LTBR-214ENST00000545445 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
LTBR-214ENST00000545445 PFN2P35080 140 aa7.54□□□□□ -1.2
LTBR-214ENST00000545445 MAJINQ3KP22 176 aa7.54□□□□□ -1.2
LTBR-214ENST00000545445 PYY3Q5JQD4 70 aa7.54□□□□□ -1.2
LTBR-214ENST00000545445 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
LTBR-214ENST00000545445 SPACA4Q8TDM5 124 aa7.54□□□□□ -1.2
LTBR-214ENST00000545445 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
LTBR-214ENST00000545445 VAMP8Q9BV40 100 aa7.54□□□□□ -1.2
LTBR-214ENST00000545445 IGKV2-24A0A0C4DH68 120 aa7.53□□□□□ -1.2
LTBR-214ENST00000545445 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
LTBR-214ENST00000545445 LINC00158P58513 81 aa7.53□□□□□ -1.2
LTBR-214ENST00000545445 GAGE2EQ4V326 116 aa7.53□□□□□ -1.2
LTBR-214ENST00000545445 FAM30AQ9NZY2 134 aa7.53□□□□□ -1.2
LTBR-214ENST00000545445 GAGE2DQ9UEU5 116 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms