RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
CD4-212ENST00000544344 D6R8Y8 96 aa8.93□□□□□ -0.98
CD4-212ENST00000544344 IFI27P40305 119 aaPredicted RBP8.93□□□□□ -0.98
CD4-212ENST00000544344 PNRC1Q12796 327 aaPredicted RBP8.93□□□□□ -0.98
CD4-212ENST00000544344 KRTAP13-1Q8IUC0 172 aa8.93□□□□□ -0.98
CD4-212ENST00000544344 LOC105371267A0A1B0GV96 52 aa8.92□□□□□ -0.98
CD4-212ENST00000544344 LINC00304Q8N9R0 145 aa8.92□□□□□ -0.98
CD4-212ENST00000544344 SMIM27A0A1W2PRY6 76 aa8.91□□□□□ -0.98
CD4-212ENST00000544344 LINC00173Q6ZV60 143 aa8.91□□□□□ -0.98
CD4-212ENST00000544344 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
CD4-212ENST00000544344 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
CD4-212ENST00000544344 MT-ND4LP03901 98 aa8.9□□□□□ -0.98
CD4-212ENST00000544344 FAM229BQ4G0N7 80 aa8.9□□□□□ -0.98
CD4-212ENST00000544344 ZC2HC1BQ5TFG8 222 aa8.9□□□□□ -0.98
CD4-212ENST00000544344 LINC00167Q96N53 147 aa8.9□□□□□ -0.98
CD4-212ENST00000544344 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
CD4-212ENST00000544344 COLCA2A8K830 154 aa8.89□□□□□ -0.99
CD4-212ENST00000544344 CKS1BP61024 79 aa8.89□□□□□ -0.99
CD4-212ENST00000544344 CBLN2Q8IUK8 224 aa8.89□□□□□ -0.99
CD4-212ENST00000544344 Q8IZM0 81 aa8.89□□□□□ -0.99
CD4-212ENST00000544344 TOMM7Q9P0U1 55 aa8.89□□□□□ -0.99
CD4-212ENST00000544344 A0A1B0GW15 77 aa8.88□□□□□ -0.99
CD4-212ENST00000544344 PRSS2P07478 247 aa8.88□□□□□ -0.99
CD4-212ENST00000544344 RPL23P62829 140 aaKnown RBP8.88□□□□□ -0.99
CD4-212ENST00000544344 Q6ZN92 141 aa8.88□□□□□ -0.99
CD4-212ENST00000544344 TEX43Q6ZNM6 134 aa8.88□□□□□ -0.99
CD4-212ENST00000544344 RPS10P5Q9NQ39 176 aa8.88□□□□□ -0.99
CD4-212ENST00000544344 A0A1B0GXF2 115 aa8.87□□□□□ -0.99
CD4-212ENST00000544344 C6orf226Q5I0X4 101 aa8.87□□□□□ -0.99
CD4-212ENST00000544344 YPEL4Q96NS1 127 aa8.87□□□□□ -0.99
CD4-212ENST00000544344 AMELXQ99217 191 aa8.87□□□□□ -0.99
CD4-212ENST00000544344 PPBPP02775 128 aa8.86□□□□□ -0.99
CD4-212ENST00000544344 RAB5AP20339 215 aa8.86□□□□□ -0.99
CD4-212ENST00000544344 FAM19A3Q7Z5A8 133 aa8.86□□□□□ -0.99
CD4-212ENST00000544344 ALKBH7Q9BT30 221 aaPredicted RBP8.86□□□□□ -0.99
CD4-212ENST00000544344 PPDPFQ9H3Y8 114 aa8.86□□□□□ -0.99
CD4-212ENST00000544344 NAT8Q9UHE5 227 aa8.86□□□□□ -0.99
CD4-212ENST00000544344 F8VRH5 84 aa8.85□□□□□ -0.99
CD4-212ENST00000544344 CTAG1AP78358 180 aa8.85□□□□□ -0.99
CD4-212ENST00000544344 MRPL54Q6P161 138 aaKnown RBP8.85□□□□□ -0.99
CD4-212ENST00000544344 KRTAP4-1Q9BYQ7 146 aa8.85□□□□□ -0.99
CD4-212ENST00000544344 GAGE10A6NGK3 116 aa8.84□□□□□ -0.99
CD4-212ENST00000544344 C2orf66Q6UXQ4 117 aa8.84□□□□□ -0.99
CD4-212ENST00000544344 C2orf88Q9BSF0 95 aa8.84□□□□□ -0.99
CD4-212ENST00000544344 PRSS47A8MTI9 375 aa8.83□□□□□ -1
CD4-212ENST00000544344 ADIRFQ15847 76 aa8.83□□□□□ -1
CD4-212ENST00000544344 ORMDL3Q8N138 153 aa8.83□□□□□ -1
CD4-212ENST00000544344 CDKN2A-AS1Q9UH64 79 aa8.83□□□□□ -1
CD4-212ENST00000544344 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
CD4-212ENST00000544344 IGKV2D-26A0A0A0MRZ7 120 aa8.82□□□□□ -1
CD4-212ENST00000544344 UBE2AP49459 152 aa8.82□□□□□ -1
CD4-212ENST00000544344 RAB5BP61020 215 aa8.82□□□□□ -1
CD4-212ENST00000544344 TMEM136Q6ZRR5 245 aa8.82□□□□□ -1
CD4-212ENST00000544344 PRELID3AQ96N28 172 aa8.82□□□□□ -1
CD4-212ENST00000544344 IGIPA6NJ69 53 aa8.81□□□□□ -1
CD4-212ENST00000544344 S100A8P05109 93 aa8.81□□□□□ -1
CD4-212ENST00000544344 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
CD4-212ENST00000544344 ASB16-AS1Q495Z4 193 aa8.81□□□□□ -1
CD4-212ENST00000544344 ANAPC16Q96DE5 110 aa8.81□□□□□ -1
CD4-212ENST00000544344 VCX2Q9H322 139 aa8.81□□□□□ -1
CD4-212ENST00000544344 CYSLTR1Q9Y271 337 aa8.8□□□□□ -1
CD4-212ENST00000544344 LOC389332A0A1B0GUA5 103 aa8.79□□□□□ -1
CD4-212ENST00000544344 C3orf22Q8N5N4 141 aa8.79□□□□□ -1
CD4-212ENST00000544344 NPSP0C0P6 89 aa8.78□□□□□ -1
CD4-212ENST00000544344 CXCL5P42830 114 aa8.78□□□□□ -1
CD4-212ENST00000544344 HERVK_113P63121 156 aa8.78□□□□□ -1
CD4-212ENST00000544344 PRLHP81277 87 aa8.78□□□□□ -1
CD4-212ENST00000544344 KRTAP13-3Q3SY46 172 aa8.78□□□□□ -1
CD4-212ENST00000544344 Q8N8P6 123 aa8.77□□□□□ -1.01
CD4-212ENST00000544344 IGKV2-28A0A075B6P5 120 aa8.76□□□□□ -1.01
CD4-212ENST00000544344 SMIM1B2RUZ4 78 aa8.76□□□□□ -1.01
CD4-212ENST00000544344 IGKV2D-28P01615 120 aa8.76□□□□□ -1.01
CD4-212ENST00000544344 FP248Q71RG6 208 aaPredicted RBP8.76□□□□□ -1.01
CD4-212ENST00000544344 TRAV9-1A0A075B6T8 112 aa8.75□□□□□ -1.01
CD4-212ENST00000544344 S100PP25815 95 aa8.75□□□□□ -1.01
CD4-212ENST00000544344 SEC11AP67812 179 aa8.75□□□□□ -1.01
CD4-212ENST00000544344 NKAPP1Q8N9T2 125 aa8.75□□□□□ -1.01
CD4-212ENST00000544344 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
CD4-212ENST00000544344 MAP1LC3AQ9H492 121 aa8.75□□□□□ -1.01
CD4-212ENST00000544344 LAMTOR2Q9Y2Q5 125 aa8.75□□□□□ -1.01
CD4-212ENST00000544344 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
CD4-212ENST00000544344 GEMIN7Q9H840 131 aaKnown RBP8.74□□□□□ -1.01
CD4-212ENST00000544344 C5orf52A6NGY3 159 aa8.73□□□□□ -1.01
CD4-212ENST00000544344 TMEM238C9JI98 176 aa8.73□□□□□ -1.01
CD4-212ENST00000544344 COX7B2Q8TF08 81 aa8.73□□□□□ -1.01
CD4-212ENST00000544344 TMEM126AQ9H061 195 aa8.73□□□□□ -1.01
CD4-212ENST00000544344 ORMDL2Q53FV1 153 aa8.72□□□□□ -1.01
CD4-212ENST00000544344 PDZD11Q5EBL8 140 aa8.72□□□□□ -1.01
CD4-212ENST00000544344 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
CD4-212ENST00000544344 SPAG11AQ6PDA7 123 aa8.72□□□□□ -1.01
CD4-212ENST00000544344 FAM19A1Q7Z5A9 133 aa8.72□□□□□ -1.01
CD4-212ENST00000544344 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
CD4-212ENST00000544344 S100A6P06703 90 aa8.71□□□□□ -1.02
CD4-212ENST00000544344 IGLV5-45A0A087WSX0 123 aa8.7□□□□□ -1.02
CD4-212ENST00000544344 K7EMI3 77 aa8.7□□□□□ -1.02
CD4-212ENST00000544344 M0R378 163 aa8.7□□□□□ -1.02
CD4-212ENST00000544344 VPREB1P12018 145 aa8.7□□□□□ -1.02
CD4-212ENST00000544344 TIMM17AQ99595 171 aa8.7□□□□□ -1.02
CD4-212ENST00000544344 PAPPA-AS1Q5QFB9 102 aa8.69□□□□□ -1.02
CD4-212ENST00000544344 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms