RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 C1orf134Q5TEV5 83 aa7.46□□□□□ -1.22
PCDH9-204ENST00000544246 C11orf71Q6IPW1 123 aa7.46□□□□□ -1.22
PCDH9-204ENST00000544246 WISP2O76076 250 aa7.45□□□□□ -1.22
PCDH9-204ENST00000544246 SPG11Q96JI7 2443 aa7.45□□□□□ -1.22
PCDH9-204ENST00000544246 Q6ZPA2 131 aa7.44□□□□□ -1.22
PCDH9-204ENST00000544246 IGLV4-60A0A075B6I1 120 aa7.44□□□□□ -1.22
PCDH9-204ENST00000544246 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
PCDH9-204ENST00000544246 SMIM29Q86T20 159 aa7.44□□□□□ -1.22
PCDH9-204ENST00000544246 CNFNQ9BYD5 112 aa7.43□□□□□ -1.22
PCDH9-204ENST00000544246 TP53AIP1Q9HCN2 124 aa7.43□□□□□ -1.22
PCDH9-204ENST00000544246 TSPEAR-AS2P59090 65 aa7.42□□□□□ -1.22
PCDH9-204ENST00000544246 C8orf87E5RJ46 101 aa7.42□□□□□ -1.22
PCDH9-204ENST00000544246 ADAMTSL4-AS1Q5T5F5 129 aa7.42□□□□□ -1.22
PCDH9-204ENST00000544246 Q8N2B8 174 aa7.42□□□□□ -1.22
PCDH9-204ENST00000544246 C6orf48Q9UBA6 75 aa7.42□□□□□ -1.22
PCDH9-204ENST00000544246 FHL2Q14192 279 aa7.42□□□□□ -1.22
PCDH9-204ENST00000544246 CEP350Q5VT06 3117 aa7.42□□□□□ -1.22
PCDH9-204ENST00000544246 MALRD1Q5VYJ5 2156 aa7.42□□□□□ -1.22
PCDH9-204ENST00000544246 PCDH15Q96QU1 1955 aa7.41□□□□□ -1.22
PCDH9-204ENST00000544246 MYO18BQ8IUG5 2567 aa7.41□□□□□ -1.22
PCDH9-204ENST00000544246 SMCR5Q8TEV8 140 aa7.41□□□□□ -1.22
PCDH9-204ENST00000544246 LINC00846Q9NV44 126 aa7.41□□□□□ -1.22
PCDH9-204ENST00000544246 LINC01561Q8N1V8 128 aa7.4□□□□□ -1.22
PCDH9-204ENST00000544246 BRI3O95415 125 aa7.4□□□□□ -1.22
PCDH9-204ENST00000544246 ATP11AUNQ6ZP68 121 aa7.4□□□□□ -1.23
PCDH9-204ENST00000544246 DSCAML1Q8TD84 2053 aa7.4□□□□□ -1.23
PCDH9-204ENST00000544246 AMELXQ99217 191 aa7.39□□□□□ -1.23
PCDH9-204ENST00000544246 COL5A1P20908 1838 aaPredicted RBP7.39□□□□□ -1.23
PCDH9-204ENST00000544246 MED13LQ71F56 2210 aa7.39□□□□□ -1.23
PCDH9-204ENST00000544246 ODF3L2Q3SX64 289 aa7.38□□□□□ -1.23
PCDH9-204ENST00000544246 SPACA4Q8TDM5 124 aa7.37□□□□□ -1.23
PCDH9-204ENST00000544246 C22orf24Q9Y442 160 aa7.37□□□□□ -1.23
PCDH9-204ENST00000544246 FASNP49327 2511 aaKnown RBP7.37□□□□□ -1.23
PCDH9-204ENST00000544246 LYPD5Q6UWN5 251 aa7.37□□□□□ -1.23
PCDH9-204ENST00000544246 Q6ZRU5 148 aa7.36□□□□□ -1.23
PCDH9-204ENST00000544246 A8MTW9 85 aa7.36□□□□□ -1.23
PCDH9-204ENST00000544246 CRIP3Q6Q6R5 217 aa7.36□□□□□ -1.23
PCDH9-204ENST00000544246 A0A1B0GUV1 79 aa7.36□□□□□ -1.23
PCDH9-204ENST00000544246 EDN2P20800 178 aa7.36□□□□□ -1.23
PCDH9-204ENST00000544246 KIAA0087Q14695 138 aa7.36□□□□□ -1.23
PCDH9-204ENST00000544246 PLXNB3Q9ULL4 1909 aa7.36□□□□□ -1.23
PCDH9-204ENST00000544246 CSPG4Q6UVK1 2322 aa7.36□□□□□ -1.23
PCDH9-204ENST00000544246 DSCAMO60469 2012 aa7.35□□□□□ -1.23
PCDH9-204ENST00000544246 CCDC168Q8NDH2 2452 aa7.35□□□□□ -1.23
PCDH9-204ENST00000544246 PIEZO2Q9H5I5 2752 aa7.35□□□□□ -1.23
PCDH9-204ENST00000544246 IGLV1-51P01701 117 aa7.35□□□□□ -1.23
PCDH9-204ENST00000544246 ZNF580Q9UK33 172 aa7.35□□□□□ -1.23
PCDH9-204ENST00000544246 MUC22E2RYF6 1773 aaPredicted RBP7.34□□□□□ -1.23
PCDH9-204ENST00000544246 H3BPC8 53 aa7.34□□□□□ -1.23
PCDH9-204ENST00000544246 URB1-AS1Q96HZ7 61 aa7.34□□□□□ -1.23
PCDH9-204ENST00000544246 SSBP3-AS1Q7Z2R9 100 aa7.33□□□□□ -1.24
PCDH9-204ENST00000544246 SPATA3Q8NHX4 192 aa7.33□□□□□ -1.24
PCDH9-204ENST00000544246 MOBPQ13875 183 aa7.33□□□□□ -1.24
PCDH9-204ENST00000544246 SONP18583 2426 aaKnown RBP7.33□□□□□ -1.24
PCDH9-204ENST00000544246 ANKHD1Q8IWZ3 2542 aaKnown RBP7.33□□□□□ -1.24
PCDH9-204ENST00000544246 IGLV8-61A0A075B6I0 122 aa7.33□□□□□ -1.24
PCDH9-204ENST00000544246 BCE1O60756 84 aa7.32□□□□□ -1.24
PCDH9-204ENST00000544246 C4orf26Q17RF5 130 aa7.32□□□□□ -1.24
PCDH9-204ENST00000544246 PRRC2AP48634 2157 aaKnown RBP7.32□□□□□ -1.24
PCDH9-204ENST00000544246 NAV3Q8IVL0 2385 aa7.32□□□□□ -1.24
PCDH9-204ENST00000544246 KRTAP10-9P60411 292 aa7.32□□□□□ -1.24
PCDH9-204ENST00000544246 ANKRD11Q6UB99 2663 aaPredicted RBP7.31□□□□□ -1.24
PCDH9-204ENST00000544246 LINC00313P59037 77 aa7.31□□□□□ -1.24
PCDH9-204ENST00000544246 Q6ZSN1 163 aa7.31□□□□□ -1.24
PCDH9-204ENST00000544246 SMR3AQ99954 134 aa7.31□□□□□ -1.24
PCDH9-204ENST00000544246 NAV2Q8IVL1 2488 aa7.31□□□□□ -1.24
PCDH9-204ENST00000544246 C10orf142B7Z368 130 aa7.3□□□□□ -1.24
PCDH9-204ENST00000544246 ARHGAP21Q5T5U3 1957 aa7.3□□□□□ -1.24
PCDH9-204ENST00000544246 C16orf95Q9H693 158 aa7.3□□□□□ -1.24
PCDH9-204ENST00000544246 TRAV22A0A0B4J277 110 aa7.29□□□□□ -1.24
PCDH9-204ENST00000544246 LINC00310P59036 64 aa7.29□□□□□ -1.24
PCDH9-204ENST00000544246 ZNF462Q96JM2 2506 aa7.29□□□□□ -1.24
PCDH9-204ENST00000544246 ADAMTS20P59510 1910 aa7.29□□□□□ -1.24
PCDH9-204ENST00000544246 HIVEP3Q5T1R4 2406 aa7.29□□□□□ -1.24
PCDH9-204ENST00000544246 ZNF106Q9H2Y7 1883 aaKnown RBP7.28□□□□□ -1.24
PCDH9-204ENST00000544246 A0A1B0GW54 56 aa7.28□□□□□ -1.24
PCDH9-204ENST00000544246 C11orf72Q8NBR9 251 aa7.28□□□□□ -1.24
PCDH9-204ENST00000544246 CEP295Q9C0D2 2601 aa7.28□□□□□ -1.24
PCDH9-204ENST00000544246 PLCE1Q9P212 2302 aa7.28□□□□□ -1.24
PCDH9-204ENST00000544246 NHLRC4P0CG21 123 aaPredicted RBP7.27□□□□□ -1.25
PCDH9-204ENST00000544246 CDIP1Q9H305 208 aa7.27□□□□□ -1.25
PCDH9-204ENST00000544246 EML5Q05BV3 1969 aa7.27□□□□□ -1.25
PCDH9-204ENST00000544246 Q8NBF4 154 aa7.27□□□□□ -1.25
PCDH9-204ENST00000544246 CDSNQ15517 529 aa7.26□□□□□ -1.25
PCDH9-204ENST00000544246 CRIPTQ9P021 101 aa7.26□□□□□ -1.25
PCDH9-204ENST00000544246 NCOA6Q14686 2063 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-204ENST00000544246 RPS28P62857 69 aaKnown RBP7.26□□□□□ -1.25
PCDH9-204ENST00000544246 LINC00167Q96N53 147 aa7.26□□□□□ -1.25
PCDH9-204ENST00000544246 AVPP01185 164 aa7.25□□□□□ -1.25
PCDH9-204ENST00000544246 TLN1Q9Y490 2541 aaKnown RBP7.25□□□□□ -1.25
PCDH9-204ENST00000544246 LRP4O75096 1905 aa7.24□□□□□ -1.25
PCDH9-204ENST00000544246 TNCP24821 2201 aa7.24□□□□□ -1.25
PCDH9-204ENST00000544246 FAM229AH3BQW9 127 aa7.24□□□□□ -1.25
PCDH9-204ENST00000544246 Q96NJ1 140 aa7.24□□□□□ -1.25
PCDH9-204ENST00000544246 APLNQ9ULZ1 77 aa7.24□□□□□ -1.25
PCDH9-204ENST00000544246 NOTCH3Q9UM47 2321 aa7.23□□□□□ -1.25
PCDH9-204ENST00000544246 COX8CQ7Z4L0 72 aa7.23□□□□□ -1.25
PCDH9-204ENST00000544246 EPG5Q9HCE0 2579 aa7.23□□□□□ -1.25
PCDH9-204ENST00000544246 TYMSOSQ8TAI1 123 aa7.23□□□□□ -1.25
PCDH9-204ENST00000544246 MDFIQ99750 246 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms