RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 SRSF9Q13242 221 aaKnown RBP eCLIP7.33□□□□□ -1.24
GABPB1-206ENST00000543881 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
GABPB1-206ENST00000543881 SPINK6Q6UWN8 80 aa7.33□□□□□ -1.24
GABPB1-206ENST00000543881 TMEM18Q96B42 140 aa7.33□□□□□ -1.24
GABPB1-206ENST00000543881 CAMK2N2Q96S95 79 aa7.33□□□□□ -1.24
GABPB1-206ENST00000543881 APOMO95445 188 aa7.32□□□□□ -1.24
GABPB1-206ENST00000543881 C2orf48Q96LS8 159 aa7.32□□□□□ -1.24
GABPB1-206ENST00000543881 ALKBH7Q9BT30 221 aaPredicted RBP7.32□□□□□ -1.24
GABPB1-206ENST00000543881 SPAG11BQ08648 103 aa7.31□□□□□ -1.24
GABPB1-206ENST00000543881 PNRC1Q12796 327 aaPredicted RBP7.31□□□□□ -1.24
GABPB1-206ENST00000543881 Q6ZRP5 223 aa7.31□□□□□ -1.24
GABPB1-206ENST00000543881 IGHV3OR16-9A0A0B4J2B5 98 aa7.3□□□□□ -1.24
GABPB1-206ENST00000543881 TRGC2P03986 189 aa7.3□□□□□ -1.24
GABPB1-206ENST00000543881 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
GABPB1-206ENST00000543881 PET117Q6UWS5 81 aa7.3□□□□□ -1.24
GABPB1-206ENST00000543881 CTDSP1Q9GZU7 261 aa7.3□□□□□ -1.24
GABPB1-206ENST00000543881 SPANXA1Q9NS26 97 aa7.3□□□□□ -1.24
GABPB1-206ENST00000543881 C9orf116Q5BN46 136 aaPredicted RBP7.3□□□□□ -1.24
GABPB1-206ENST00000543881 TEX43Q6ZNM6 134 aa7.3□□□□□ -1.24
GABPB1-206ENST00000543881 LPAP08519 4548 aa7.29□□□□□ -1.24
GABPB1-206ENST00000543881 RPL18AQ02543 176 aaKnown RBP7.29□□□□□ -1.24
GABPB1-206ENST00000543881 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
GABPB1-206ENST00000543881 C4orf48Q5BLP8 95 aa7.29□□□□□ -1.24
GABPB1-206ENST00000543881 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
GABPB1-206ENST00000543881 KRTAP9-2Q9BYQ4 174 aa7.29□□□□□ -1.24
GABPB1-206ENST00000543881 TMEM136Q6ZRR5 245 aa7.28□□□□□ -1.24
GABPB1-206ENST00000543881 PHF5AQ7RTV0 110 aaKnown RBP7.28□□□□□ -1.24
GABPB1-206ENST00000543881 ORMDL3Q8N138 153 aa7.28□□□□□ -1.24
GABPB1-206ENST00000543881 PRELID3AQ96N28 172 aa7.28□□□□□ -1.24
GABPB1-206ENST00000543881 PSORS1C2Q9UIG4 136 aa7.28□□□□□ -1.24
GABPB1-206ENST00000543881 K7ERU9 68 aa7.27□□□□□ -1.25
GABPB1-206ENST00000543881 UNQ6190/PRO20217Q6UXQ8 127 aa7.27□□□□□ -1.25
GABPB1-206ENST00000543881 ATP5L2Q7Z4Y8 100 aa7.27□□□□□ -1.25
GABPB1-206ENST00000543881 MRPL35Q9NZE8 188 aaKnown RBP7.27□□□□□ -1.25
GABPB1-206ENST00000543881 IGLV4-3A0A075B6K6 122 aa7.26□□□□□ -1.25
GABPB1-206ENST00000543881 FAM168BA1KXE4 195 aa7.25□□□□□ -1.25
GABPB1-206ENST00000543881 KIAA0087Q14695 138 aa7.25□□□□□ -1.25
GABPB1-206ENST00000543881 OCIAD2Q56VL3 154 aa7.25□□□□□ -1.25
GABPB1-206ENST00000543881 LINC00242Q5T6M2 205 aa7.25□□□□□ -1.25
GABPB1-206ENST00000543881 KRTAP11-1Q8IUC1 163 aa7.25□□□□□ -1.25
GABPB1-206ENST00000543881 VPS25Q9BRG1 176 aa7.25□□□□□ -1.25
GABPB1-206ENST00000543881 C6orf48Q9UBA6 75 aa7.25□□□□□ -1.25
GABPB1-206ENST00000543881 PYGO1Q9Y3Y4 419 aa7.25□□□□□ -1.25
GABPB1-206ENST00000543881 A0A087WZ39 114 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 TGIF2-C20orf24A0A0A6YYL0 155 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 LOC389332A0A1B0GUA5 103 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 F8WDY8 70 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 NDUFA1O15239 70 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 IFI27P40305 119 aaPredicted RBP7.24□□□□□ -1.25
GABPB1-206ENST00000543881 PDZD11Q5EBL8 140 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
GABPB1-206ENST00000543881 MT-ND6P03923 174 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 TLX1NBP0CAT3 122 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 ZC2HC1BQ5TFG8 222 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
GABPB1-206ENST00000543881 MUC2Q02817 5179 aa7.23□□□□□ -1.25
GABPB1-206ENST00000543881 C1orf137Q5JT78 98 aa7.23□□□□□ -1.25
GABPB1-206ENST00000543881 TMEM141Q96I45 108 aa7.23□□□□□ -1.25
GABPB1-206ENST00000543881 MAP1LC3AQ9H492 121 aa7.23□□□□□ -1.25
GABPB1-206ENST00000543881 CST9LQ9H4G1 147 aa7.23□□□□□ -1.25
GABPB1-206ENST00000543881 LAMTOR2Q9Y2Q5 125 aa7.23□□□□□ -1.25
GABPB1-206ENST00000543881 A0A1B0GV72 72 aa7.22□□□□□ -1.25
GABPB1-206ENST00000543881 UBE2D1P51668 147 aa7.22□□□□□ -1.25
GABPB1-206ENST00000543881 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
GABPB1-206ENST00000543881 LINC00173Q6ZV60 143 aa7.22□□□□□ -1.25
GABPB1-206ENST00000543881 Q8N8P6 123 aa7.22□□□□□ -1.25
GABPB1-206ENST00000543881 GAGE2EQ4V326 116 aa7.21□□□□□ -1.26
GABPB1-206ENST00000543881 C2orf66Q6UXQ4 117 aa7.21□□□□□ -1.26
GABPB1-206ENST00000543881 FAM19A5Q7Z5A7 132 aaPredicted RBP7.21□□□□□ -1.26
GABPB1-206ENST00000543881 ANAPC16Q96DE5 110 aa7.21□□□□□ -1.26
GABPB1-206ENST00000543881 UQCR10Q9UDW1 63 aa7.21□□□□□ -1.26
GABPB1-206ENST00000543881 GAGE2DQ9UEU5 116 aa7.21□□□□□ -1.26
GABPB1-206ENST00000543881 IGLV7-43P04211 117 aa7.2□□□□□ -1.26
GABPB1-206ENST00000543881 AMELXQ99217 191 aa7.2□□□□□ -1.26
GABPB1-206ENST00000543881 CYSLTR1Q9Y271 337 aa7.2□□□□□ -1.26
GABPB1-206ENST00000543881 IGIPA6NJ69 53 aa7.19□□□□□ -1.26
GABPB1-206ENST00000543881 SCGB1D1O95968 90 aa7.19□□□□□ -1.26
GABPB1-206ENST00000543881 MTURNQ8N3F0 131 aa7.19□□□□□ -1.26
GABPB1-206ENST00000543881 C9orf129Q5T035 196 aaKnown RBP7.18□□□□□ -1.26
GABPB1-206ENST00000543881 LINC01561Q8N1V8 128 aa7.18□□□□□ -1.26
GABPB1-206ENST00000543881 VAMP8Q9BV40 100 aa7.18□□□□□ -1.26
GABPB1-206ENST00000543881 TRBV30A0A0K0K1B3 111 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 A0A0U1RQV1 116 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 H0Y8G0 127 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 ORMDL2Q53FV1 153 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 FAM19A3Q7Z5A8 133 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 VCX2Q9H322 139 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 NDUFC2-KCTD14E9PQ53 114 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 M0QXV9 152 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 Q6ZN92 141 aa7.17□□□□□ -1.26
GABPB1-206ENST00000543881 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
GABPB1-206ENST00000543881 H0Y9J4 135 aa7.16□□□□□ -1.26
GABPB1-206ENST00000543881 K7EMI3 77 aa7.16□□□□□ -1.26
GABPB1-206ENST00000543881 KIAA1644Q3SXP7 199 aa7.16□□□□□ -1.26
GABPB1-206ENST00000543881 PRR26Q8N8Z3 221 aa7.16□□□□□ -1.26
GABPB1-206ENST00000543881 DIRC1Q969H9 104 aa7.16□□□□□ -1.26
GABPB1-206ENST00000543881 NXT2Q9NPJ8 142 aaKnown RBP7.16□□□□□ -1.26
GABPB1-206ENST00000543881 IGLC3P0DOY3 106 aa7.15□□□□□ -1.27
GABPB1-206ENST00000543881 TOMM7Q9P0U1 55 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms