RNA–Protein interactions for RNA: ENST00000543702.1

SMG1P4-206, Transcript of SMG1 pseudogene 4, humanhuman

TSL 2

Gene SMG1P4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-206ENST00000543702 LOC100130705A0A1B0GUX0 176 aa-0.67□□□□□ -2.52
SMG1P4-206ENST00000543702 LOC285095A0A1B0GVY8 99 aa-0.67□□□□□ -2.52
SMG1P4-206ENST00000543702 SSSCA1O60232 199 aa-0.67□□□□□ -2.52
SMG1P4-206ENST00000543702 HMGN1P05114 100 aa-0.67□□□□□ -2.52
SMG1P4-206ENST00000543702 REV3LO60673 3130 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 FAM223BA6NKX1 122 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 K7EP13 123 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 TACC2O95359 2948 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 LELP1Q5T871 98 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 KNDC1Q76NI1 1749 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 COMMD6Q7Z4G1 85 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 SMG6Q86US8 1419 aaKnown RBP-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 CDC42SE2Q9NRR3 84 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 ADGRL2O95490 1459 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 NKTRP30414 1462 aaKnown RBP-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 PLEKHH2Q8IVE3 1493 aa-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 PRRC2CQ9Y520 2896 aaKnown RBP-0.68□□□□□ -2.52
SMG1P4-206ENST00000543702 SLIT1O75093 1534 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 TNRC18O15417 2968 aaPredicted RBP-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 ADAMTS12P58397 1594 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 RGPD2P0DJD1 1756 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 OOSP1A8MZH6 123 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 SEC11AP67812 179 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 C5orf38Q86SI9 138 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 C9orf62Q8N4C0 152 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 FAM167A-AS1Q96KT0 104 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 SPRR2FQ96RM1 72 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 PRO1933Q9H354 126 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 MANBALQ9NQG1 85 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 UQCR10Q9UDW1 63 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 EPG5Q9HCE0 2579 aa-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 SONP18583 2426 aaKnown RBP-0.69□□□□□ -2.52
SMG1P4-206ENST00000543702 AKAP13Q12802 2813 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 AKAP9Q99996 3911 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 EPPK1P58107 5090 aaKnown RBP-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 CC2D2AQ9P2K1 1620 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 HECTD1Q9ULT8 2610 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 A0A1B0GWA3 101 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 AKAIN1P0CW23 69 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 GNG11P61952 73 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 LAMA1P25391 3075 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 MUC17Q685J3 4493 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 USP9YO00507 2555 aaPredicted RBP-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 NBASA2RRP1 2371 aa-0.7□□□□□ -2.52
SMG1P4-206ENST00000543702 VPS13DQ5THJ4 4388 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 PTPN23Q9H3S7 1636 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 ZZEF1O43149 2961 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 DMXL1Q9Y485 3027 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 CHD1O14646 1710 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 KIAA1551Q9HCM1 1747 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 A0A087WVE0 104 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 A0A1B0GU69 56 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 I3L3M4 83 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 UBE2D3P61077 147 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 UBE2D2P62837 147 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 Q0VG73 95 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 WHAMMP3Q1A5X7 153 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 HEPN1Q6WQI6 88 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 C1orf54Q8WWF1 131 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 LYSTQ99698 3801 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 PKHD1L1Q86WI1 4243 aa-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 TARBP1Q13395 1621 aaKnown RBP-0.71□□□□□ -2.52
SMG1P4-206ENST00000543702 KALRNO60229 2985 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 MON2Q7Z3U7 1717 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 CUBNO60494 3623 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 BCORQ6W2J9 1755 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 H0YGG7 62 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 TRAPPC2P0DI81 140 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 TRAPPC2BP0DI82 140 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 HSD52Q0P140 79 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 C9orf153Q5TBE3 101 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 DIP2CQ9Y2E4 1556 aa-0.72□□□□□ -2.52
SMG1P4-206ENST00000543702 DNAH9Q9NYC9 4486 aa-0.72□□□□□ -2.53
SMG1P4-206ENST00000543702 TROQ12816 1431 aaPredicted RBP-0.72□□□□□ -2.53
SMG1P4-206ENST00000543702 SCAPERQ9BY12 1400 aa-0.72□□□□□ -2.53
SMG1P4-206ENST00000543702 CUX1P39880 1505 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 ITPR3Q14573 2671 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 UBE2L5PA0A1B0GUS4 154 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 SNCAP37840 140 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 UBE2L3P68036 154 aaKnown RBP-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 C6orf201Q7Z4U5 140 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 DEFB107AQ8IZN7 70 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 NEBP20929 6669 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 LRRC37AA6NMS7 1700 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 TRANK1O15050 2925 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 KTN1Q86UP2 1357 aaKnown RBP-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 KIF20BQ96Q89 1820 aa-0.73□□□□□ -2.53
SMG1P4-206ENST00000543702 SHPRHQ149N8 1683 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 ABCA3Q99758 1704 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 TRAV30A0A087WSZ9 112 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 H3BNG1 76 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 ASIPP42127 132 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 WFDC13Q8IUB5 93 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 C12orf57Q99622 126 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 MRPL34Q9BQ48 92 aaKnown RBP-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 DPH3P1Q9H4G8 78 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 PRO1854Q9UHT4 67 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 BIRC6Q9NR09 4857 aa-0.74□□□□□ -2.53
SMG1P4-206ENST00000543702 SPG11Q96JI7 2443 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms