RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 F8WDY8 70 aa6.96□□□□□ -1.3
DDB1-222ENST00000543627 J3QL48 77 aa6.96□□□□□ -1.3
DDB1-222ENST00000543627 RNF151Q2KHN1 245 aa6.96□□□□□ -1.3
DDB1-222ENST00000543627 LINC01561Q8N1V8 128 aa6.96□□□□□ -1.3
DDB1-222ENST00000543627 HSBP1O75506 76 aa6.95□□□□□ -1.3
DDB1-222ENST00000543627 SCO1O75880 301 aa6.95□□□□□ -1.3
DDB1-222ENST00000543627 ATP5LO75964 103 aa6.95□□□□□ -1.3
DDB1-222ENST00000543627 Q6ZRP5 223 aa6.95□□□□□ -1.3
DDB1-222ENST00000543627 FAM19A3Q7Z5A8 133 aa6.95□□□□□ -1.3
DDB1-222ENST00000543627 FLG2Q5D862 2391 aaPredicted RBP6.95□□□□□ -1.3
DDB1-222ENST00000543627 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
DDB1-222ENST00000543627 H0Y8G0 127 aa6.94□□□□□ -1.3
DDB1-222ENST00000543627 H3BRM9 83 aa6.94□□□□□ -1.3
DDB1-222ENST00000543627 FAM19A5Q7Z5A7 132 aaPredicted RBP6.94□□□□□ -1.3
DDB1-222ENST00000543627 Q8IZM0 81 aa6.94□□□□□ -1.3
DDB1-222ENST00000543627 FAM19A2Q8N3H0 131 aa6.94□□□□□ -1.3
DDB1-222ENST00000543627 COX7B2Q8TF08 81 aa6.94□□□□□ -1.3
DDB1-222ENST00000543627 CHCHD1Q96BP2 118 aaKnown RBP6.94□□□□□ -1.3
DDB1-222ENST00000543627 TRBV30A0A0K0K1B3 111 aa6.93□□□□□ -1.3
DDB1-222ENST00000543627 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
DDB1-222ENST00000543627 HNRNPA3P51991 378 aaKnown RBP6.93□□□□□ -1.3
DDB1-222ENST00000543627 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
DDB1-222ENST00000543627 PDZD11Q5EBL8 140 aa6.93□□□□□ -1.3
DDB1-222ENST00000543627 PHF5AQ7RTV0 110 aaKnown RBP6.93□□□□□ -1.3
DDB1-222ENST00000543627 COLCA2A8K830 154 aa6.92□□□□□ -1.3
DDB1-222ENST00000543627 SMIM1B2RUZ4 78 aa6.92□□□□□ -1.3
DDB1-222ENST00000543627 TMEM170BQ5T4T1 132 aa6.92□□□□□ -1.3
DDB1-222ENST00000543627 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
DDB1-222ENST00000543627 CHTOPQ9Y3Y2 248 aaKnown RBP6.92□□□□□ -1.3
DDB1-222ENST00000543627 NDUFC2-KCTD14E9PQ53 114 aa6.91□□□□□ -1.3
DDB1-222ENST00000543627 F8VRH5 84 aa6.91□□□□□ -1.3
DDB1-222ENST00000543627 IGLC3P0DOY3 106 aa6.91□□□□□ -1.3
DDB1-222ENST00000543627 SERF1AO75920 110 aa6.9□□□□□ -1.3
DDB1-222ENST00000543627 TLX1NBP0CAT3 122 aa6.9□□□□□ -1.3
DDB1-222ENST00000543627 FABP4P15090 132 aa6.9□□□□□ -1.3
DDB1-222ENST00000543627 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
DDB1-222ENST00000543627 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
DDB1-222ENST00000543627 IGLV5-45A0A087WSX0 123 aa6.89□□□□□ -1.31
DDB1-222ENST00000543627 C11orf86A6NJI1 115 aa6.89□□□□□ -1.31
DDB1-222ENST00000543627 CXCL5P42830 114 aa6.89□□□□□ -1.31
DDB1-222ENST00000543627 UBE2BP63146 152 aa6.89□□□□□ -1.31
DDB1-222ENST00000543627 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
DDB1-222ENST00000543627 LEPROTL1O95214 131 aa6.88□□□□□ -1.31
DDB1-222ENST00000543627 PFN2P35080 140 aa6.88□□□□□ -1.31
DDB1-222ENST00000543627 C1orf137Q5JT78 98 aa6.88□□□□□ -1.31
DDB1-222ENST00000543627 C9orf129Q5T035 196 aaKnown RBP6.88□□□□□ -1.31
DDB1-222ENST00000543627 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
DDB1-222ENST00000543627 MYCBP2O75592 4640 aa6.88□□□□□ -1.31
DDB1-222ENST00000543627 A6NJY4 79 aa6.87□□□□□ -1.31
DDB1-222ENST00000543627 M0QXV9 152 aa6.87□□□□□ -1.31
DDB1-222ENST00000543627 NUPR1O60356 82 aa6.87□□□□□ -1.31
DDB1-222ENST00000543627 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
DDB1-222ENST00000543627 TRAV12-1A0A0B4J245 112 aa6.85□□□□□ -1.31
DDB1-222ENST00000543627 KRTAP29-1A8MX34 341 aaPredicted RBP6.85□□□□□ -1.31
DDB1-222ENST00000543627 HSPB8Q9UJY1 196 aa6.85□□□□□ -1.31
DDB1-222ENST00000543627 A0A0U1RRA0 63 aa6.84□□□□□ -1.31
DDB1-222ENST00000543627 LINC00310P59036 64 aa6.84□□□□□ -1.31
DDB1-222ENST00000543627 SERTAD4-AS1Q5TG53 156 aa6.84□□□□□ -1.31
DDB1-222ENST00000543627 PMCHL2Q9BQD1 86 aa6.84□□□□□ -1.31
DDB1-222ENST00000543627 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
DDB1-222ENST00000543627 IGLV5-39A0A0G2JS06 123 aa6.83□□□□□ -1.32
DDB1-222ENST00000543627 OXTP01178 125 aa6.83□□□□□ -1.32
DDB1-222ENST00000543627 KRTAP7-1Q8IUC3 87 aa6.83□□□□□ -1.32
DDB1-222ENST00000543627 TMEM223A0PJW6 202 aa6.82□□□□□ -1.32
DDB1-222ENST00000543627 GAGE10A6NGK3 116 aa6.82□□□□□ -1.32
DDB1-222ENST00000543627 LINC00158P58513 81 aa6.82□□□□□ -1.32
DDB1-222ENST00000543627 SPINK6Q6UWN8 80 aa6.82□□□□□ -1.32
DDB1-222ENST00000543627 KRTAP11-1Q8IUC1 163 aa6.82□□□□□ -1.32
DDB1-222ENST00000543627 MAP1LC3CQ9BXW4 147 aa6.82□□□□□ -1.32
DDB1-222ENST00000543627 ERG28Q9UKR5 140 aa6.82□□□□□ -1.32
DDB1-222ENST00000543627 LRP1Q07954 4544 aaKnown RBP6.82□□□□□ -1.32
DDB1-222ENST00000543627 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 ATP6V1G1O75348 118 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 ODF1Q14990 250 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 LBHQ53QV2 105 aaPredicted RBP6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
DDB1-222ENST00000543627 DMBT1Q9UGM3 2413 aaPredicted RBP6.81□□□□□ -1.32
DDB1-222ENST00000543627 PKHD1L1Q86WI1 4243 aa6.8□□□□□ -1.32
DDB1-222ENST00000543627 RPL37AP8A6NKH3 93 aa6.8□□□□□ -1.32
DDB1-222ENST00000543627 MEIG1Q5JSS6 88 aa6.8□□□□□ -1.32
DDB1-222ENST00000543627 NKAPP1Q8N9T2 125 aa6.8□□□□□ -1.32
DDB1-222ENST00000543627 DPM2O94777 84 aa6.79□□□□□ -1.32
DDB1-222ENST00000543627 IGLV7-43P04211 117 aa6.79□□□□□ -1.32
DDB1-222ENST00000543627 REG3GQ6UW15 175 aa6.79□□□□□ -1.32
DDB1-222ENST00000543627 MRPL55Q7Z7F7 128 aaKnown RBP6.79□□□□□ -1.32
DDB1-222ENST00000543627 HERC1Q15751 4861 aa6.79□□□□□ -1.32
DDB1-222ENST00000543627 FAT3Q8TDW7 4589 aa6.79□□□□□ -1.32
DDB1-222ENST00000543627 IGKCP01834 107 aa6.78□□□□□ -1.32
DDB1-222ENST00000543627 PLNP26678 52 aa6.78□□□□□ -1.32
DDB1-222ENST00000543627 SRSF9Q13242 221 aaKnown RBP eCLIP6.78□□□□□ -1.32
DDB1-222ENST00000543627 LINC00167Q96N53 147 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms