RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 PRR3P79522 188 aaKnown RBP16.52■□□□□ 0.24
SHD-201ENST00000543264 C16orf74Q96GX8 76 aa16.52■□□□□ 0.24
SHD-201ENST00000543264 WFDC10AQ9H1F0 79 aa16.52■□□□□ 0.24
SHD-201ENST00000543264 LINC00959A0A1B0GUT2 108 aa16.52■□□□□ 0.23
SHD-201ENST00000543264 LY6G6DO95868 133 aa16.52■□□□□ 0.23
SHD-201ENST00000543264 USP24Q9UPU5 2620 aa16.52■□□□□ 0.23
SHD-201ENST00000543264 MYO18BQ8IUG5 2567 aa16.52■□□□□ 0.23
SHD-201ENST00000543264 CR1P17927 2039 aa16.51■□□□□ 0.23
SHD-201ENST00000543264 XCL1P47992 114 aa16.51■□□□□ 0.23
SHD-201ENST00000543264 C5orf47Q569G3 176 aa16.5■□□□□ 0.23
SHD-201ENST00000543264 DSCR8Q96T75 97 aa16.5■□□□□ 0.23
SHD-201ENST00000543264 SETXQ7Z333 2677 aaKnown RBP16.49■□□□□ 0.23
SHD-201ENST00000543264 TMEM86BQ8N661 226 aa16.49■□□□□ 0.23
SHD-201ENST00000543264 FHL2Q14192 279 aa16.48■□□□□ 0.23
SHD-201ENST00000543264 PTPN13Q12923 2485 aa16.48■□□□□ 0.23
SHD-201ENST00000543264 SETD2Q9BYW2 2564 aaPredicted RBP16.48■□□□□ 0.23
SHD-201ENST00000543264 CCL24O00175 119 aa16.47■□□□□ 0.23
SHD-201ENST00000543264 FAM208BQ5VWN6 2430 aa16.47■□□□□ 0.23
SHD-201ENST00000543264 Q8N814 137 aa16.47■□□□□ 0.23
SHD-201ENST00000543264 NF1P21359 2839 aa16.47■□□□□ 0.23
SHD-201ENST00000543264 RNASE1P07998 156 aaKnown RBP16.46■□□□□ 0.23
SHD-201ENST00000543264 TRAV23DV6A0A075B6W5 121 aa16.46■□□□□ 0.23
SHD-201ENST00000543264 JMJD7-PLA2G4BH0Y9G9 81 aa16.46■□□□□ 0.23
SHD-201ENST00000543264 LRRK2Q5S007 2527 aa16.45■□□□□ 0.22
SHD-201ENST00000543264 CLPSL2Q6UWE3 100 aa16.45■□□□□ 0.22
SHD-201ENST00000543264 NANOS2P60321 138 aaKnown RBP16.45■□□□□ 0.22
SHD-201ENST00000543264 FAM19A1Q7Z5A9 133 aa16.45■□□□□ 0.22
SHD-201ENST00000543264 S100A7L2Q5SY68 101 aa16.44■□□□□ 0.22
SHD-201ENST00000543264 SONP18583 2426 aaKnown RBP16.44■□□□□ 0.22
SHD-201ENST00000543264 GHRHP01286 108 aa16.44■□□□□ 0.22
SHD-201ENST00000543264 ENHOQ6UWT2 76 aa16.43■□□□□ 0.22
SHD-201ENST00000543264 LINC00167Q96N53 147 aa16.43■□□□□ 0.22
SHD-201ENST00000543264 TMEM256-PLSCR3K7ERE1 68 aa16.42■□□□□ 0.22
SHD-201ENST00000543264 OXTP01178 125 aa16.42■□□□□ 0.22
SHD-201ENST00000543264 NAV2Q8IVL1 2488 aa16.42■□□□□ 0.22
SHD-201ENST00000543264 Q8IZM0 81 aa16.4■□□□□ 0.22
SHD-201ENST00000543264 ABCA12Q86UK0 2595 aa16.39■□□□□ 0.22
SHD-201ENST00000543264 DEFB130BP0DP73 79 aa16.39■□□□□ 0.22
SHD-201ENST00000543264 DEFB130AP0DP74 79 aa16.39■□□□□ 0.22
SHD-201ENST00000543264 CSNK1G2-AS1Q8NCQ2 148 aa16.38■□□□□ 0.21
SHD-201ENST00000543264 ATP5EP2Q5VTU8 51 aa16.37■□□□□ 0.21
SHD-201ENST00000543264 FN1P02751 2386 aaKnown RBP16.37■□□□□ 0.21
SHD-201ENST00000543264 UBL5Q9BZL1 73 aa16.36■□□□□ 0.21
SHD-201ENST00000543264 GYPEP15421 78 aa16.34■□□□□ 0.21
SHD-201ENST00000543264 A0A096LPF7 62 aa16.34■□□□□ 0.21
SHD-201ENST00000543264 C6orf99Q4VX62 202 aa16.34■□□□□ 0.21
SHD-201ENST00000543264 C9orf116Q5BN46 136 aaPredicted RBP16.33■□□□□ 0.21
SHD-201ENST00000543264 LYPD5Q6UWN5 251 aa16.33■□□□□ 0.2
SHD-201ENST00000543264 CMC4P56277 68 aaPredicted RBP16.33■□□□□ 0.2
SHD-201ENST00000543264 C20orf197Q8N268 126 aa16.32■□□□□ 0.2
SHD-201ENST00000543264 KRTAP10-9P60411 292 aa16.32■□□□□ 0.2
SHD-201ENST00000543264 C4orf26Q17RF5 130 aa16.32■□□□□ 0.2
SHD-201ENST00000543264 C19orf73Q9NVV2 129 aa16.32■□□□□ 0.2
SHD-201ENST00000543264 NDUFC2O95298 119 aa16.31■□□□□ 0.2
SHD-201ENST00000543264 PRB1P04280 392 aa16.3■□□□□ 0.2
SHD-201ENST00000543264 ZNF462Q96JM2 2506 aa16.29■□□□□ 0.2
SHD-201ENST00000543264 A0A1B0GUV1 79 aa16.29■□□□□ 0.2
SHD-201ENST00000543264 ZNF469Q96JG9 3925 aaPredicted RBP16.29■□□□□ 0.2
SHD-201ENST00000543264 KIAA0087Q14695 138 aa16.28■□□□□ 0.2
SHD-201ENST00000543264 Q8NDZ9 215 aa16.28■□□□□ 0.2
SHD-201ENST00000543264 IGLV10-54A0A075B6I4 117 aa16.28■□□□□ 0.2
SHD-201ENST00000543264 DNAJC9-AS1A6NH13 148 aa16.28■□□□□ 0.2
SHD-201ENST00000543264 RBM3P98179 157 aaKnown RBP16.27■□□□□ 0.19
SHD-201ENST00000543264 LINC00269Q8N2A0 174 aa16.27■□□□□ 0.19
SHD-201ENST00000543264 TRBV10-3A0A0K0K1G6 114 aa16.26■□□□□ 0.19
SHD-201ENST00000543264 COX17Q14061 63 aa16.25■□□□□ 0.19
SHD-201ENST00000543264 LINC00575Q6W349 94 aa16.25■□□□□ 0.19
SHD-201ENST00000543264 LAMTOR3Q9UHA4 124 aa16.25■□□□□ 0.19
SHD-201ENST00000543264 Q6ZQT0 140 aa16.24■□□□□ 0.19
SHD-201ENST00000543264 M0R2N4 97 aa16.24■□□□□ 0.19
SHD-201ENST00000543264 IGLV1-51P01701 117 aa16.24■□□□□ 0.19
SHD-201ENST00000543264 Q5XG85 94 aa16.24■□□□□ 0.19
SHD-201ENST00000543264 HRCT1Q6UXD1 115 aa16.23■□□□□ 0.19
SHD-201ENST00000543264 NDUFC2-KCTD14E9PQ53 114 aa16.23■□□□□ 0.19
SHD-201ENST00000543264 BBC3Q96PG8 261 aaPredicted RBP16.23■□□□□ 0.19
SHD-201ENST00000543264 NBEAL2Q6ZNJ1 2754 aa16.22■□□□□ 0.19
SHD-201ENST00000543264 CD164L2Q6UWJ8 174 aa16.22■□□□□ 0.19
SHD-201ENST00000543264 CHCHD10Q8WYQ3 142 aaPredicted RBP16.22■□□□□ 0.19
SHD-201ENST00000543264 HAMPP81172 84 aa16.22■□□□□ 0.19
SHD-201ENST00000543264 DEFB113Q30KQ7 82 aa16.21■□□□□ 0.19
SHD-201ENST00000543264 Q8N3U1 123 aa16.21■□□□□ 0.19
SHD-201ENST00000543264 ESM1Q9NQ30 184 aa16.21■□□□□ 0.19
SHD-201ENST00000543264 CCDC168Q8NDH2 2452 aa16.21■□□□□ 0.19
SHD-201ENST00000543264 ZNF561-AS1K7EIQ3 104 aa16.19■□□□□ 0.18
SHD-201ENST00000543264 GCN1Q92616 2671 aaKnown RBP16.18■□□□□ 0.18
SHD-201ENST00000543264 ANGP03950 147 aaKnown RBP16.18■□□□□ 0.18
SHD-201ENST00000543264 LINC01547P58512 204 aaPredicted RBP16.18■□□□□ 0.18
SHD-201ENST00000543264 APCP25054 2843 aa16.18■□□□□ 0.18
SHD-201ENST00000543264 IGHV4-28A0A0C4DH34 117 aa16.17■□□□□ 0.18
SHD-201ENST00000543264 FAM236DA0A1B0GTK5 79 aa16.17■□□□□ 0.18
SHD-201ENST00000543264 FAM236CP0DP71 79 aa16.17■□□□□ 0.18
SHD-201ENST00000543264 PRO0255Q9UI72 69 aa16.17■□□□□ 0.18
SHD-201ENST00000543264 TRAV7A0A075B6U4 112 aa16.15■□□□□ 0.18
SHD-201ENST00000543264 LOC110117498A0A087WWA1 95 aa16.15■□□□□ 0.18
SHD-201ENST00000543264 LINC01006Q8NI28 216 aa16.15■□□□□ 0.18
SHD-201ENST00000543264 REG3AQ06141 175 aa16.15■□□□□ 0.18
SHD-201ENST00000543264 Q6ZVQ6 151 aa16.15■□□□□ 0.18
SHD-201ENST00000543264 C6orf223Q8N319 242 aa16.15■□□□□ 0.18
SHD-201ENST00000543264 TRAV10A0A0B4J240 114 aa16.14■□□□□ 0.17
SHD-201ENST00000543264 C10orf25Q5T742 122 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms