RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 KMT2CQ8NEZ4 4911 aaKnown RBP11.32□□□□□ -0.6
GTDC1-219ENST00000542155 FRAS1Q86XX4 4008 aa11.31□□□□□ -0.6
GTDC1-219ENST00000542155 PRSS2P07478 247 aa11.31□□□□□ -0.6
GTDC1-219ENST00000542155 A0A0J9YXY3 114 aa11.31□□□□□ -0.6
GTDC1-219ENST00000542155 SLPIP03973 132 aa11.31□□□□□ -0.6
GTDC1-219ENST00000542155 UNQ6190/PRO20217Q6UXQ8 127 aa11.31□□□□□ -0.6
GTDC1-219ENST00000542155 NTN5Q8WTR8 489 aaPredicted RBP11.3□□□□□ -0.6
GTDC1-219ENST00000542155 GVQW2A0A096LPI5 108 aaPredicted RBP11.3□□□□□ -0.6
GTDC1-219ENST00000542155 LRCOL1A6NCL2 159 aa11.3□□□□□ -0.6
GTDC1-219ENST00000542155 DNAH17Q9UFH2 4485 aa11.29□□□□□ -0.6
GTDC1-219ENST00000542155 C9orf116Q5BN46 136 aaPredicted RBP11.29□□□□□ -0.6
GTDC1-219ENST00000542155 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
GTDC1-219ENST00000542155 ZNF561-AS1K7EIQ3 104 aa11.28□□□□□ -0.6
GTDC1-219ENST00000542155 DDTP30046 118 aa11.28□□□□□ -0.6
GTDC1-219ENST00000542155 A0A0U1RRA0 63 aa11.28□□□□□ -0.6
GTDC1-219ENST00000542155 CKS1BP61024 79 aa11.28□□□□□ -0.6
GTDC1-219ENST00000542155 ADAMTSL4-AS1Q5T5F5 129 aa11.28□□□□□ -0.6
GTDC1-219ENST00000542155 SCGB1D4Q6XE38 83 aa11.28□□□□□ -0.6
GTDC1-219ENST00000542155 LCE6AA0A183 80 aa11.27□□□□□ -0.6
GTDC1-219ENST00000542155 C1orf134Q5TEV5 83 aa11.27□□□□□ -0.6
GTDC1-219ENST00000542155 LITAFQ99732 161 aa11.27□□□□□ -0.6
GTDC1-219ENST00000542155 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
GTDC1-219ENST00000542155 Q6ZRU5 148 aa11.26□□□□□ -0.61
GTDC1-219ENST00000542155 DAND5Q8N907 189 aa11.25□□□□□ -0.61
GTDC1-219ENST00000542155 CTAG1AP78358 180 aa11.24□□□□□ -0.61
GTDC1-219ENST00000542155 CAMK2N2Q96S95 79 aa11.24□□□□□ -0.61
GTDC1-219ENST00000542155 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
GTDC1-219ENST00000542155 SMIM13P0DJ93 91 aa11.24□□□□□ -0.61
GTDC1-219ENST00000542155 RTL8CO15255 209 aa11.23□□□□□ -0.61
GTDC1-219ENST00000542155 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
GTDC1-219ENST00000542155 PFN2P35080 140 aa11.23□□□□□ -0.61
GTDC1-219ENST00000542155 HERV-K104P63124 156 aa11.23□□□□□ -0.61
GTDC1-219ENST00000542155 HIGD1BQ9P298 99 aa11.23□□□□□ -0.61
GTDC1-219ENST00000542155 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
GTDC1-219ENST00000542155 CXCL5P42830 114 aa11.22□□□□□ -0.61
GTDC1-219ENST00000542155 C2orf48Q96LS8 159 aa11.22□□□□□ -0.61
GTDC1-219ENST00000542155 MEIG1Q5JSS6 88 aa11.22□□□□□ -0.61
GTDC1-219ENST00000542155 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.21□□□□□ -0.61
GTDC1-219ENST00000542155 ERG28Q9UKR5 140 aa11.21□□□□□ -0.61
GTDC1-219ENST00000542155 A0A087WTM6 91 aa11.21□□□□□ -0.62
GTDC1-219ENST00000542155 LINC00587B1AMM8 73 aa11.21□□□□□ -0.62
GTDC1-219ENST00000542155 FUSP35637 526 aaKnown RBP eCLIP11.21□□□□□ -0.62
GTDC1-219ENST00000542155 SYCNQ0VAF6 134 aa11.21□□□□□ -0.62
GTDC1-219ENST00000542155 HECTD4Q9Y4D8 3996 aa11.2□□□□□ -0.62
GTDC1-219ENST00000542155 RYR2Q92736 4967 aa11.2□□□□□ -0.62
GTDC1-219ENST00000542155 NPC2P61916 151 aa11.2□□□□□ -0.62
GTDC1-219ENST00000542155 TNP2Q05952 138 aa11.2□□□□□ -0.62
GTDC1-219ENST00000542155 LINC00158P58513 81 aa11.18□□□□□ -0.62
GTDC1-219ENST00000542155 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
GTDC1-219ENST00000542155 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
GTDC1-219ENST00000542155 Q8N814 137 aa11.17□□□□□ -0.62
GTDC1-219ENST00000542155 HIST1H4GQ99525 98 aa11.17□□□□□ -0.62
GTDC1-219ENST00000542155 SPANXB1Q9NS25 103 aaPredicted RBP11.17□□□□□ -0.62
GTDC1-219ENST00000542155 TIMM17BO60830 172 aa11.17□□□□□ -0.62
GTDC1-219ENST00000542155 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
GTDC1-219ENST00000542155 SOSTDC1Q6X4U4 206 aa11.17□□□□□ -0.62
GTDC1-219ENST00000542155 CARD19Q96LW7 228 aa11.17□□□□□ -0.62
GTDC1-219ENST00000542155 DNAH11Q96DT5 4516 aa11.17□□□□□ -0.62
GTDC1-219ENST00000542155 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
GTDC1-219ENST00000542155 TMEM238C9JI98 176 aa11.16□□□□□ -0.62
GTDC1-219ENST00000542155 HINT1P49773 126 aaPredicted RBP11.16□□□□□ -0.62
GTDC1-219ENST00000542155 MUSTN1Q8IVN3 82 aa11.15□□□□□ -0.62
GTDC1-219ENST00000542155 CIRBPQ14011 172 aaKnown RBP11.15□□□□□ -0.62
GTDC1-219ENST00000542155 LINC01620Q4KN68 170 aa11.15□□□□□ -0.62
GTDC1-219ENST00000542155 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
GTDC1-219ENST00000542155 SPANXCQ9NY87 97 aa11.15□□□□□ -0.62
GTDC1-219ENST00000542155 CNBPP62633 177 aaKnown RBP11.14□□□□□ -0.63
GTDC1-219ENST00000542155 F8WDY8 70 aa11.13□□□□□ -0.63
GTDC1-219ENST00000542155 FXYD2P54710 66 aa11.13□□□□□ -0.63
GTDC1-219ENST00000542155 HSD52Q0P140 79 aa11.13□□□□□ -0.63
GTDC1-219ENST00000542155 C14orf177Q52M58 125 aa11.13□□□□□ -0.63
GTDC1-219ENST00000542155 GCSHP23434 173 aa11.13□□□□□ -0.63
GTDC1-219ENST00000542155 Q6ZRP5 223 aa11.13□□□□□ -0.63
GTDC1-219ENST00000542155 CEND1Q8N111 149 aa11.13□□□□□ -0.63
GTDC1-219ENST00000542155 COX17Q14061 63 aa11.12□□□□□ -0.63
GTDC1-219ENST00000542155 BVES-AS1Q5T3Y7 98 aa11.12□□□□□ -0.63
GTDC1-219ENST00000542155 LINC00308Q8TCZ7 52 aa11.12□□□□□ -0.63
GTDC1-219ENST00000542155 PKD1P98161 4303 aa11.12□□□□□ -0.63
GTDC1-219ENST00000542155 SND1-IT1Q9HBX3 110 aa11.11□□□□□ -0.63
GTDC1-219ENST00000542155 TAL2Q16559 108 aa11.11□□□□□ -0.63
GTDC1-219ENST00000542155 SNHG12Q9BXW3 62 aa11.11□□□□□ -0.63
GTDC1-219ENST00000542155 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
GTDC1-219ENST00000542155 Q8NDZ9 215 aa11.1□□□□□ -0.63
GTDC1-219ENST00000542155 NDUFC2-KCTD14E9PQ53 114 aa11.1□□□□□ -0.63
GTDC1-219ENST00000542155 BATFQ16520 125 aa11.1□□□□□ -0.63
GTDC1-219ENST00000542155 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
GTDC1-219ENST00000542155 GAGE2EQ4V326 116 aa11.1□□□□□ -0.63
GTDC1-219ENST00000542155 GAGE2DQ9UEU5 116 aa11.1□□□□□ -0.63
GTDC1-219ENST00000542155 EREGO14944 169 aa11.09□□□□□ -0.63
GTDC1-219ENST00000542155 RYR3Q15413 4870 aa11.08□□□□□ -0.63
GTDC1-219ENST00000542155 KRTAP10-2P60368 255 aa11.08□□□□□ -0.64
GTDC1-219ENST00000542155 Q6ZVH6 145 aa11.08□□□□□ -0.64
GTDC1-219ENST00000542155 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
GTDC1-219ENST00000542155 A4D1N5 150 aa11.07□□□□□ -0.64
GTDC1-219ENST00000542155 PTTG1IPP53801 180 aa11.07□□□□□ -0.64
GTDC1-219ENST00000542155 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
GTDC1-219ENST00000542155 C9orf163Q8N9P6 203 aa11.07□□□□□ -0.64
GTDC1-219ENST00000542155 DNAH5Q8TE73 4624 aa11.07□□□□□ -0.64
GTDC1-219ENST00000542155 TLX1NBP0CAT3 122 aa11.06□□□□□ -0.64
GTDC1-219ENST00000542155 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms