RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 TAGLN2P37802 199 aaKnown RBP6.68□□□□□ -1.34
COPA-205ENST00000541366 C6orf226Q5I0X4 101 aa6.68□□□□□ -1.34
COPA-205ENST00000541366 LINC01551Q86U37 167 aa6.68□□□□□ -1.34
COPA-205ENST00000541366 LINC00337Q8N6G1 96 aa6.68□□□□□ -1.34
COPA-205ENST00000541366 OSTCQ9NRP0 149 aa6.68□□□□□ -1.34
COPA-205ENST00000541366 V9GYV3 84 aa6.68□□□□□ -1.34
COPA-205ENST00000541366 SCO1O75880 301 aa6.67□□□□□ -1.34
COPA-205ENST00000541366 NPYP01303 97 aa6.67□□□□□ -1.34
COPA-205ENST00000541366 PRLHP81277 87 aa6.67□□□□□ -1.34
COPA-205ENST00000541366 LINC00862A6NCI5 91 aa6.66□□□□□ -1.34
COPA-205ENST00000541366 D6R8Y8 96 aa6.66□□□□□ -1.34
COPA-205ENST00000541366 IFI27P40305 119 aaPredicted RBP6.66□□□□□ -1.34
COPA-205ENST00000541366 PNRC1Q12796 327 aaPredicted RBP6.66□□□□□ -1.34
COPA-205ENST00000541366 SMIM7Q9BQ49 75 aa6.66□□□□□ -1.34
COPA-205ENST00000541366 ALKBH7Q9BT30 221 aaPredicted RBP6.66□□□□□ -1.34
COPA-205ENST00000541366 Q6ZN92 141 aa6.65□□□□□ -1.34
COPA-205ENST00000541366 Q8IZM0 81 aa6.65□□□□□ -1.34
COPA-205ENST00000541366 LINC01561Q8N1V8 128 aa6.65□□□□□ -1.34
COPA-205ENST00000541366 TMEM141Q96I45 108 aa6.65□□□□□ -1.34
COPA-205ENST00000541366 EIF5A2Q9GZV4 153 aaKnown RBP6.65□□□□□ -1.34
COPA-205ENST00000541366 IGKV2-28A0A075B6P5 120 aa6.64□□□□□ -1.35
COPA-205ENST00000541366 IGKV2D-28P01615 120 aa6.64□□□□□ -1.35
COPA-205ENST00000541366 RGS21Q2M5E4 152 aa6.64□□□□□ -1.35
COPA-205ENST00000541366 TEX43Q6ZNM6 134 aa6.64□□□□□ -1.35
COPA-205ENST00000541366 FP248Q71RG6 208 aaPredicted RBP6.64□□□□□ -1.35
COPA-205ENST00000541366 PYGO1Q9Y3Y4 419 aa6.64□□□□□ -1.35
COPA-205ENST00000541366 F8VRH5 84 aa6.63□□□□□ -1.35
COPA-205ENST00000541366 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
COPA-205ENST00000541366 CTAG1AP78358 180 aa6.63□□□□□ -1.35
COPA-205ENST00000541366 KRTAP19-2Q3LHN2 52 aa6.63□□□□□ -1.35
COPA-205ENST00000541366 NAT8BQ9UHF3 227 aa6.63□□□□□ -1.35
COPA-205ENST00000541366 MT1HP80294 61 aa6.62□□□□□ -1.35
COPA-205ENST00000541366 FAM74A3Q4VXF1 159 aa6.62□□□□□ -1.35
COPA-205ENST00000541366 CDKN2A-AS1Q9UH64 79 aa6.62□□□□□ -1.35
COPA-205ENST00000541366 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
COPA-205ENST00000541366 TMEM238C9JI98 176 aa6.61□□□□□ -1.35
COPA-205ENST00000541366 RAB5AP20339 215 aa6.61□□□□□ -1.35
COPA-205ENST00000541366 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
COPA-205ENST00000541366 FAM19A1Q7Z5A9 133 aa6.61□□□□□ -1.35
COPA-205ENST00000541366 PLEKHB2Q96CS7 222 aa6.61□□□□□ -1.35
COPA-205ENST00000541366 C2orf88Q9BSF0 95 aa6.61□□□□□ -1.35
COPA-205ENST00000541366 IGLV5-37A0A075B6J1 123 aa6.6□□□□□ -1.35
COPA-205ENST00000541366 RAB5BP61020 215 aa6.6□□□□□ -1.35
COPA-205ENST00000541366 MRPL54Q6P161 138 aaKnown RBP6.6□□□□□ -1.35
COPA-205ENST00000541366 SLC51BQ86UW2 128 aa6.6□□□□□ -1.35
COPA-205ENST00000541366 DAND5Q8N907 189 aa6.6□□□□□ -1.35
COPA-205ENST00000541366 NKAPP1Q8N9T2 125 aa6.6□□□□□ -1.35
COPA-205ENST00000541366 AMELXQ99217 191 aa6.6□□□□□ -1.35
COPA-205ENST00000541366 KRTAP9-9Q9BYP9 154 aa6.6□□□□□ -1.35
COPA-205ENST00000541366 KRTAP9-4Q9BYQ2 154 aa6.6□□□□□ -1.35
COPA-205ENST00000541366 SMIM27A0A1W2PRY6 76 aa6.59□□□□□ -1.35
COPA-205ENST00000541366 LINC00310P59036 64 aa6.59□□□□□ -1.35
COPA-205ENST00000541366 SPAG11AQ6PDA7 123 aa6.59□□□□□ -1.35
COPA-205ENST00000541366 C2orf66Q6UXQ4 117 aa6.59□□□□□ -1.35
COPA-205ENST00000541366 VCX2Q9H322 139 aa6.59□□□□□ -1.35
COPA-205ENST00000541366 LOC389332A0A1B0GUA5 103 aa6.58□□□□□ -1.36
COPA-205ENST00000541366 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
COPA-205ENST00000541366 SRP19P09132 144 aaKnown RBP6.57□□□□□ -1.36
COPA-205ENST00000541366 RPL23P62829 140 aaKnown RBP6.57□□□□□ -1.36
COPA-205ENST00000541366 ALKAL2Q6UX46 152 aa6.57□□□□□ -1.36
COPA-205ENST00000541366 TMEM136Q6ZRR5 245 aa6.57□□□□□ -1.36
COPA-205ENST00000541366 FAM19A3Q7Z5A8 133 aa6.57□□□□□ -1.36
COPA-205ENST00000541366 PRELID3AQ96N28 172 aa6.57□□□□□ -1.36
COPA-205ENST00000541366 A0A1B0GW15 77 aa6.56□□□□□ -1.36
COPA-205ENST00000541366 A0A1B0GXF2 115 aa6.56□□□□□ -1.36
COPA-205ENST00000541366 M0R378 163 aa6.56□□□□□ -1.36
COPA-205ENST00000541366 BLOC1S1P78537 153 aa6.56□□□□□ -1.36
COPA-205ENST00000541366 CBLN2Q8IUK8 224 aa6.56□□□□□ -1.36
COPA-205ENST00000541366 Q8NBF4 154 aa6.56□□□□□ -1.36
COPA-205ENST00000541366 HIGD2AQ9BW72 106 aa6.56□□□□□ -1.36
COPA-205ENST00000541366 CYSLTR1Q9Y271 337 aa6.56□□□□□ -1.36
COPA-205ENST00000541366 IGIPA6NJ69 53 aa6.55□□□□□ -1.36
COPA-205ENST00000541366 SMIM1B2RUZ4 78 aa6.55□□□□□ -1.36
COPA-205ENST00000541366 PPBPP02775 128 aa6.55□□□□□ -1.36
COPA-205ENST00000541366 CXCL5P42830 114 aa6.55□□□□□ -1.36
COPA-205ENST00000541366 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
COPA-205ENST00000541366 HERVK_113P63121 156 aa6.55□□□□□ -1.36
COPA-205ENST00000541366 ADIRFQ15847 76 aa6.55□□□□□ -1.36
COPA-205ENST00000541366 ORMDL3Q8N138 153 aa6.55□□□□□ -1.36
COPA-205ENST00000541366 COX7B2Q8TF08 81 aa6.55□□□□□ -1.36
COPA-205ENST00000541366 F8W036 122 aa6.54□□□□□ -1.36
COPA-205ENST00000541366 SPRR4Q96PI1 79 aa6.54□□□□□ -1.36
COPA-205ENST00000541366 GEMIN7Q9H840 131 aaKnown RBP6.54□□□□□ -1.36
COPA-205ENST00000541366 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
COPA-205ENST00000541366 Q8NDZ9 215 aa6.53□□□□□ -1.36
COPA-205ENST00000541366 PRSS47A8MTI9 375 aa6.52□□□□□ -1.37
COPA-205ENST00000541366 S100A8P05109 93 aa6.52□□□□□ -1.37
COPA-205ENST00000541366 VPREB1P12018 145 aa6.52□□□□□ -1.37
COPA-205ENST00000541366 Q8N8P6 123 aa6.51□□□□□ -1.37
COPA-205ENST00000541366 C9JQL5 133 aa6.5□□□□□ -1.37
COPA-205ENST00000541366 SPINK8P0C7L1 97 aa6.5□□□□□ -1.37
COPA-205ENST00000541366 PFN2P35080 140 aa6.5□□□□□ -1.37
COPA-205ENST00000541366 SEC11AP67812 179 aa6.5□□□□□ -1.37
COPA-205ENST00000541366 PDZD11Q5EBL8 140 aa6.5□□□□□ -1.37
COPA-205ENST00000541366 MAP1LC3AQ9H492 121 aa6.5□□□□□ -1.37
COPA-205ENST00000541366 FLGP20930 4061 aaPredicted RBP6.49□□□□□ -1.37
COPA-205ENST00000541366 SPINK1P00995 79 aa6.49□□□□□ -1.37
COPA-205ENST00000541366 TCTE3Q8IZS6 198 aa6.49□□□□□ -1.37
COPA-205ENST00000541366 GNB1LQ9BYB4 327 aa6.49□□□□□ -1.37
COPA-205ENST00000541366 SND1-IT1Q9HBX3 110 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms