RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 HERV-K104P63124 156 aa10.67□□□□□ -0.7
TRAF3-204ENST00000539721 SFTA2Q6UW10 78 aa10.67□□□□□ -0.7
TRAF3-204ENST00000539721 GVQW2A0A096LPI5 108 aaPredicted RBP10.66□□□□□ -0.7
TRAF3-204ENST00000539721 LECT2O14960 151 aa10.66□□□□□ -0.7
TRAF3-204ENST00000539721 Q6ZRN7 208 aaPredicted RBP10.65□□□□□ -0.7
TRAF3-204ENST00000539721 NTN5Q8WTR8 489 aaPredicted RBP10.65□□□□□ -0.7
TRAF3-204ENST00000539721 HIGD1BQ9P298 99 aa10.65□□□□□ -0.7
TRAF3-204ENST00000539721 KMT2AQ03164 3969 aa10.65□□□□□ -0.7
TRAF3-204ENST00000539721 MEIG1Q5JSS6 88 aa10.64□□□□□ -0.71
TRAF3-204ENST00000539721 C1orf134Q5TEV5 83 aa10.63□□□□□ -0.71
TRAF3-204ENST00000539721 C2orf48Q96LS8 159 aa10.63□□□□□ -0.71
TRAF3-204ENST00000539721 CAMK2N2Q96S95 79 aa10.63□□□□□ -0.71
TRAF3-204ENST00000539721 CTAG1AP78358 180 aa10.62□□□□□ -0.71
TRAF3-204ENST00000539721 WFDC2Q14508 124 aa10.62□□□□□ -0.71
TRAF3-204ENST00000539721 UNQ6190/PRO20217Q6UXQ8 127 aa10.62□□□□□ -0.71
TRAF3-204ENST00000539721 DNAH10Q8IVF4 4471 aa10.62□□□□□ -0.71
TRAF3-204ENST00000539721 TMEM238C9JI98 176 aa10.62□□□□□ -0.71
TRAF3-204ENST00000539721 CIRBPQ14011 172 aaKnown RBP10.62□□□□□ -0.71
TRAF3-204ENST00000539721 C10orf25Q5T742 122 aa10.62□□□□□ -0.71
TRAF3-204ENST00000539721 A0A0U1RRA0 63 aa10.6□□□□□ -0.71
TRAF3-204ENST00000539721 LCE6AA0A183 80 aa10.6□□□□□ -0.71
TRAF3-204ENST00000539721 F8WDY8 70 aa10.6□□□□□ -0.71
TRAF3-204ENST00000539721 TIMM17BO60830 172 aa10.6□□□□□ -0.71
TRAF3-204ENST00000539721 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
TRAF3-204ENST00000539721 ERG28Q9UKR5 140 aa10.6□□□□□ -0.71
TRAF3-204ENST00000539721 C14orf177Q52M58 125 aa10.6□□□□□ -0.71
TRAF3-204ENST00000539721 HIST1H4GQ99525 98 aa10.6□□□□□ -0.71
TRAF3-204ENST00000539721 LITAFQ99732 161 aa10.6□□□□□ -0.71
TRAF3-204ENST00000539721 SPANXB1Q9NS25 103 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-204ENST00000539721 LRCOL1A6NCL2 159 aa10.59□□□□□ -0.71
TRAF3-204ENST00000539721 LINC00587B1AMM8 73 aa10.59□□□□□ -0.71
TRAF3-204ENST00000539721 PFN2P35080 140 aa10.59□□□□□ -0.71
TRAF3-204ENST00000539721 SYCNQ0VAF6 134 aa10.59□□□□□ -0.71
TRAF3-204ENST00000539721 SRSF9Q13242 221 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRAF3-204ENST00000539721 Q6ZRU5 148 aa10.59□□□□□ -0.71
TRAF3-204ENST00000539721 TRBV30A0A0K0K1B3 111 aa10.58□□□□□ -0.72
TRAF3-204ENST00000539721 LINC00158P58513 81 aa10.58□□□□□ -0.72
TRAF3-204ENST00000539721 HSD52Q0P140 79 aa10.58□□□□□ -0.72
TRAF3-204ENST00000539721 C9orf116Q5BN46 136 aaPredicted RBP10.58□□□□□ -0.72
TRAF3-204ENST00000539721 ADAMTSL4-AS1Q5T5F5 129 aa10.58□□□□□ -0.72
TRAF3-204ENST00000539721 C6orf48Q9UBA6 75 aa10.58□□□□□ -0.72
TRAF3-204ENST00000539721 TAL2Q16559 108 aa10.57□□□□□ -0.72
TRAF3-204ENST00000539721 DAND5Q8N907 189 aa10.57□□□□□ -0.72
TRAF3-204ENST00000539721 CARD19Q96LW7 228 aa10.57□□□□□ -0.72
TRAF3-204ENST00000539721 SPANXDQ9BXN6 97 aa10.56□□□□□ -0.72
TRAF3-204ENST00000539721 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
TRAF3-204ENST00000539721 SLPIP03973 132 aa10.55□□□□□ -0.72
TRAF3-204ENST00000539721 COX17Q14061 63 aa10.55□□□□□ -0.72
TRAF3-204ENST00000539721 NPC2P61916 151 aa10.54□□□□□ -0.72
TRAF3-204ENST00000539721 Q6ZVH6 145 aa10.54□□□□□ -0.72
TRAF3-204ENST00000539721 MIR7-3HGQ8N6C7 128 aa10.54□□□□□ -0.72
TRAF3-204ENST00000539721 DNAH2Q9P225 4427 aa10.54□□□□□ -0.72
TRAF3-204ENST00000539721 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.54□□□□□ -0.72
TRAF3-204ENST00000539721 A0A087WTM6 91 aa10.54□□□□□ -0.72
TRAF3-204ENST00000539721 GCSHP23434 173 aa10.54□□□□□ -0.72
TRAF3-204ENST00000539721 HINT1P49773 126 aaPredicted RBP10.54□□□□□ -0.72
TRAF3-204ENST00000539721 CEND1Q8N111 149 aa10.53□□□□□ -0.72
TRAF3-204ENST00000539721 HYDINQ4G0P3 5121 aa10.53□□□□□ -0.72
TRAF3-204ENST00000539721 M0R143 59 aa10.52□□□□□ -0.72
TRAF3-204ENST00000539721 RNF151Q2KHN1 245 aa10.52□□□□□ -0.72
TRAF3-204ENST00000539721 MUSTN1Q8IVN3 82 aa10.52□□□□□ -0.72
TRAF3-204ENST00000539721 Q8N814 137 aa10.52□□□□□ -0.72
TRAF3-204ENST00000539721 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.52□□□□□ -0.73
TRAF3-204ENST00000539721 CNBPP62633 177 aaKnown RBP10.52□□□□□ -0.73
TRAF3-204ENST00000539721 RTL8CO15255 209 aa10.51□□□□□ -0.73
TRAF3-204ENST00000539721 IFITM1P13164 125 aa10.51□□□□□ -0.73
TRAF3-204ENST00000539721 BATFQ16520 125 aa10.51□□□□□ -0.73
TRAF3-204ENST00000539721 BVES-AS1Q5T3Y7 98 aa10.51□□□□□ -0.73
TRAF3-204ENST00000539721 LINC00308Q8TCZ7 52 aa10.51□□□□□ -0.73
TRAF3-204ENST00000539721 SACSQ9NZJ4 4579 aa10.51□□□□□ -0.73
TRAF3-204ENST00000539721 PTTG1IPP53801 180 aa10.49□□□□□ -0.73
TRAF3-204ENST00000539721 COPS9Q8WXC6 57 aa10.49□□□□□ -0.73
TRAF3-204ENST00000539721 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
TRAF3-204ENST00000539721 FXYD2P54710 66 aa10.49□□□□□ -0.73
TRAF3-204ENST00000539721 TNP2Q05952 138 aa10.49□□□□□ -0.73
TRAF3-204ENST00000539721 SOSTDC1Q6X4U4 206 aa10.49□□□□□ -0.73
TRAF3-204ENST00000539721 EREGO14944 169 aa10.48□□□□□ -0.73
TRAF3-204ENST00000539721 RPL24P83731 157 aaKnown RBP10.48□□□□□ -0.73
TRAF3-204ENST00000539721 EIF4EBP3O60516 100 aaPredicted RBP10.47□□□□□ -0.73
TRAF3-204ENST00000539721 SNHG12Q9BXW3 62 aa10.47□□□□□ -0.73
TRAF3-204ENST00000539721 SND1-IT1Q9HBX3 110 aa10.47□□□□□ -0.73
TRAF3-204ENST00000539721 FRAS1Q86XX4 4008 aa10.47□□□□□ -0.73
TRAF3-204ENST00000539721 RPL18AQ02543 176 aaKnown RBP10.47□□□□□ -0.73
TRAF3-204ENST00000539721 TMEM238LA0A1B0GVL6 79 aa10.46□□□□□ -0.74
TRAF3-204ENST00000539721 A6NJY4 79 aa10.46□□□□□ -0.74
TRAF3-204ENST00000539721 TLX1NBP0CAT3 122 aa10.46□□□□□ -0.74
TRAF3-204ENST00000539721 DNAH17Q9UFH2 4485 aa10.46□□□□□ -0.74
TRAF3-204ENST00000539721 LOC107984640A0A0U1RRK4 108 aa10.45□□□□□ -0.74
TRAF3-204ENST00000539721 A4D1N5 150 aa10.45□□□□□ -0.74
TRAF3-204ENST00000539721 GAGE2EQ4V326 116 aa10.45□□□□□ -0.74
TRAF3-204ENST00000539721 Q6ZRP5 223 aa10.45□□□□□ -0.74
TRAF3-204ENST00000539721 GAGE2DQ9UEU5 116 aa10.45□□□□□ -0.74
TRAF3-204ENST00000539721 PPDPFQ9H3Y8 114 aa10.44□□□□□ -0.74
TRAF3-204ENST00000539721 XAGE1AQ9HD64 81 aa10.44□□□□□ -0.74
TRAF3-204ENST00000539721 NHP2Q9NX24 153 aaKnown RBP10.44□□□□□ -0.74
TRAF3-204ENST00000539721 LOC107984156A0A0G2JMH3 177 aa10.43□□□□□ -0.74
TRAF3-204ENST00000539721 A6NDN8 102 aa10.43□□□□□ -0.74
TRAF3-204ENST00000539721 ARL17AQ8IVW1 177 aa10.43□□□□□ -0.74
TRAF3-204ENST00000539721 C9orf163Q8N9P6 203 aa10.43□□□□□ -0.74
TRAF3-204ENST00000539721 GAGE2BQ13066 116 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms