RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 IGLV1-51P01701 117 aa10.4□□□□□ -0.75
CACNB1-206ENST00000539338 BRI3O95415 125 aa10.38□□□□□ -0.75
CACNB1-206ENST00000539338 FN1P02751 2386 aaKnown RBP10.38□□□□□ -0.75
CACNB1-206ENST00000539338 J3QL48 77 aa10.37□□□□□ -0.75
CACNB1-206ENST00000539338 FHL2Q14192 279 aa10.37□□□□□ -0.75
CACNB1-206ENST00000539338 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
CACNB1-206ENST00000539338 A0A087WYN8 130 aa10.37□□□□□ -0.75
CACNB1-206ENST00000539338 RETNQ9HD89 108 aa10.37□□□□□ -0.75
CACNB1-206ENST00000539338 DHRS4-AS1Q9P1J3 65 aa10.37□□□□□ -0.75
CACNB1-206ENST00000539338 COX7CP15954 63 aa10.36□□□□□ -0.75
CACNB1-206ENST00000539338 WFDC13Q8IUB5 93 aa10.36□□□□□ -0.75
CACNB1-206ENST00000539338 RPL28P46779 137 aaKnown RBP10.35□□□□□ -0.75
CACNB1-206ENST00000539338 NTM-AS1Q6ZSK4 140 aa10.35□□□□□ -0.75
CACNB1-206ENST00000539338 MTORP42345 2549 aa10.35□□□□□ -0.75
CACNB1-206ENST00000539338 BEAN1Q3B7T3 259 aa10.34□□□□□ -0.75
CACNB1-206ENST00000539338 Q6JHZ5 121 aa10.34□□□□□ -0.75
CACNB1-206ENST00000539338 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.34□□□□□ -0.75
CACNB1-206ENST00000539338 ZNF706Q9Y5V0 76 aaPredicted RBP10.34□□□□□ -0.75
CACNB1-206ENST00000539338 TRBV10-3A0A0K0K1G6 114 aa10.34□□□□□ -0.75
CACNB1-206ENST00000539338 Q8N814 137 aa10.33□□□□□ -0.76
CACNB1-206ENST00000539338 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
CACNB1-206ENST00000539338 CSDC2Q9Y534 153 aaKnown RBP10.33□□□□□ -0.76
CACNB1-206ENST00000539338 A0A087WVE0 104 aa10.33□□□□□ -0.76
CACNB1-206ENST00000539338 KIF25-AS1Q9Y6Z4 181 aa10.33□□□□□ -0.76
CACNB1-206ENST00000539338 LOC107984640A0A0U1RRK4 108 aa10.32□□□□□ -0.76
CACNB1-206ENST00000539338 FAM240AA0A1B0GVK7 77 aa10.32□□□□□ -0.76
CACNB1-206ENST00000539338 FHL3Q13643 280 aa10.32□□□□□ -0.76
CACNB1-206ENST00000539338 AGRNO00468 2067 aa10.32□□□□□ -0.76
CACNB1-206ENST00000539338 PRR4Q16378 134 aa10.32□□□□□ -0.76
CACNB1-206ENST00000539338 HRCT1Q6UXD1 115 aa10.32□□□□□ -0.76
CACNB1-206ENST00000539338 SPTSSBQ8NFR3 76 aa10.31□□□□□ -0.76
CACNB1-206ENST00000539338 DNAH12Q6ZR08 3092 aa10.31□□□□□ -0.76
CACNB1-206ENST00000539338 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
CACNB1-206ENST00000539338 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
CACNB1-206ENST00000539338 Q6Q795 121 aa10.3□□□□□ -0.76
CACNB1-206ENST00000539338 C6orf223Q8N319 242 aa10.3□□□□□ -0.76
CACNB1-206ENST00000539338 EGFEM1PQ0D2K5 195 aa10.29□□□□□ -0.76
CACNB1-206ENST00000539338 FLNBO75369 2602 aaKnown RBP10.28□□□□□ -0.76
CACNB1-206ENST00000539338 Q6ZTC4 211 aa10.28□□□□□ -0.76
CACNB1-206ENST00000539338 FAM30AQ9NZY2 134 aa10.28□□□□□ -0.76
CACNB1-206ENST00000539338 CELA1Q9UNI1 258 aa10.27□□□□□ -0.77
CACNB1-206ENST00000539338 IGLV9-49A0A0B4J1Y8 123 aa10.26□□□□□ -0.77
CACNB1-206ENST00000539338 A0A0U1RQV1 116 aa10.26□□□□□ -0.77
CACNB1-206ENST00000539338 PLAC8L1A1L4L8 177 aa10.26□□□□□ -0.77
CACNB1-206ENST00000539338 NDUFC1O43677 76 aa10.26□□□□□ -0.77
CACNB1-206ENST00000539338 C16orf90A8MZG2 172 aa10.26□□□□□ -0.77
CACNB1-206ENST00000539338 CASC2Q6XLA1 102 aa10.26□□□□□ -0.77
CACNB1-206ENST00000539338 MDFIQ99750 246 aa10.26□□□□□ -0.77
CACNB1-206ENST00000539338 F8P00451 2351 aa10.25□□□□□ -0.77
CACNB1-206ENST00000539338 LINC00315P59091 139 aa10.25□□□□□ -0.77
CACNB1-206ENST00000539338 SVIPQ8NHG7 77 aa10.25□□□□□ -0.77
CACNB1-206ENST00000539338 SEC61GP60059 68 aa10.25□□□□□ -0.77
CACNB1-206ENST00000539338 LINC01546A6NGU7 62 aa10.24□□□□□ -0.77
CACNB1-206ENST00000539338 A8MTW9 85 aa10.24□□□□□ -0.77
CACNB1-206ENST00000539338 C11orf72Q8NBR9 251 aa10.24□□□□□ -0.77
CACNB1-206ENST00000539338 PLA2G1BP04054 148 aaKnown RBP10.24□□□□□ -0.77
CACNB1-206ENST00000539338 M0QXV9 152 aa10.23□□□□□ -0.77
CACNB1-206ENST00000539338 LINC00337Q8N6G1 96 aa10.23□□□□□ -0.77
CACNB1-206ENST00000539338 Q8N2B8 174 aa10.23□□□□□ -0.77
CACNB1-206ENST00000539338 A0A1B0GUV1 79 aa10.22□□□□□ -0.77
CACNB1-206ENST00000539338 C1orf137Q5JT78 98 aa10.22□□□□□ -0.77
CACNB1-206ENST00000539338 ATP5EP56381 51 aaPredicted RBP10.21□□□□□ -0.77
CACNB1-206ENST00000539338 FAM19A4Q96LR4 140 aa10.21□□□□□ -0.78
CACNB1-206ENST00000539338 UTRNP46939 3433 aa10.2□□□□□ -0.78
CACNB1-206ENST00000539338 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
CACNB1-206ENST00000539338 POLQO75417 2590 aa10.19□□□□□ -0.78
CACNB1-206ENST00000539338 TRAV7A0A075B6U4 112 aa10.19□□□□□ -0.78
CACNB1-206ENST00000539338 CDIP1Q9H305 208 aa10.18□□□□□ -0.78
CACNB1-206ENST00000539338 Q9UF83 564 aa10.18□□□□□ -0.78
CACNB1-206ENST00000539338 PTPRBP23467 1997 aa10.18□□□□□ -0.78
CACNB1-206ENST00000539338 CEP350Q5VT06 3117 aa10.18□□□□□ -0.78
CACNB1-206ENST00000539338 REG3GQ6UW15 175 aa10.18□□□□□ -0.78
CACNB1-206ENST00000539338 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
CACNB1-206ENST00000539338 IGLV5-39A0A0G2JS06 123 aa10.17□□□□□ -0.78
CACNB1-206ENST00000539338 Q8N3U1 123 aa10.17□□□□□ -0.78
CACNB1-206ENST00000539338 C10orf25Q5T742 122 aa10.16□□□□□ -0.78
CACNB1-206ENST00000539338 LINC00575Q6W349 94 aa10.15□□□□□ -0.78
CACNB1-206ENST00000539338 LINC00336Q6ZUF6 198 aa10.15□□□□□ -0.78
CACNB1-206ENST00000539338 Q6ZRU5 148 aa10.15□□□□□ -0.79
CACNB1-206ENST00000539338 SMCPP49901 116 aaPredicted RBP10.14□□□□□ -0.79
CACNB1-206ENST00000539338 IGHV3OR16-9A0A0B4J2B5 98 aa10.13□□□□□ -0.79
CACNB1-206ENST00000539338 PRRC2CQ9Y520 2896 aaKnown RBP10.13□□□□□ -0.79
CACNB1-206ENST00000539338 Q8N9L7 120 aa10.13□□□□□ -0.79
CACNB1-206ENST00000539338 LINC00208Q96KT6 92 aa10.12□□□□□ -0.79
CACNB1-206ENST00000539338 V9GYY9 64 aa10.12□□□□□ -0.79
CACNB1-206ENST00000539338 Q6ZVQ6 151 aa10.12□□□□□ -0.79
CACNB1-206ENST00000539338 MRPL55Q7Z7F7 128 aaKnown RBP10.11□□□□□ -0.79
CACNB1-206ENST00000539338 SBSPONQ8IVN8 264 aa10.11□□□□□ -0.79
CACNB1-206ENST00000539338 C2orf48Q96LS8 159 aa10.11□□□□□ -0.79
CACNB1-206ENST00000539338 SOSTDC1Q6X4U4 206 aa10.11□□□□□ -0.79
CACNB1-206ENST00000539338 LINC01561Q8N1V8 128 aa10.11□□□□□ -0.79
CACNB1-206ENST00000539338 DEFB116Q30KQ4 102 aa10.1□□□□□ -0.79
CACNB1-206ENST00000539338 COL27A1Q8IZC6 1860 aaPredicted RBP10.1□□□□□ -0.79
CACNB1-206ENST00000539338 A6NED7 52 aa10.1□□□□□ -0.79
CACNB1-206ENST00000539338 SMIM26A0A096LP01 95 aa10.09□□□□□ -0.79
CACNB1-206ENST00000539338 LINC01547P58512 204 aaPredicted RBP10.09□□□□□ -0.79
CACNB1-206ENST00000539338 ESRGQ1W209 222 aa10.09□□□□□ -0.79
CACNB1-206ENST00000539338 A0A087WSZ3 146 aa10.08□□□□□ -0.8
CACNB1-206ENST00000539338 Q9BRP9 147 aa10.08□□□□□ -0.8
CACNB1-206ENST00000539338 PRO0461Q9UI25 63 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms