RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
GNE-204ENST00000539208 MRPL23Q16540 153 aaKnown RBP12.33□□□□□ -0.44
GNE-204ENST00000539208 CCL18P55774 89 aa12.32□□□□□ -0.44
GNE-204ENST00000539208 CD164L2Q6UWJ8 174 aa12.32□□□□□ -0.44
GNE-204ENST00000539208 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
GNE-204ENST00000539208 IGKV2-28A0A075B6P5 120 aa12.32□□□□□ -0.44
GNE-204ENST00000539208 IGKV2D-28P01615 120 aa12.32□□□□□ -0.44
GNE-204ENST00000539208 CRPP02741 224 aa12.31□□□□□ -0.44
GNE-204ENST00000539208 RPL28P46779 137 aaKnown RBP12.31□□□□□ -0.44
GNE-204ENST00000539208 UBE2WQ96B02 151 aa12.31□□□□□ -0.44
GNE-204ENST00000539208 TEX49A0A1B0GTD5 131 aa12.3□□□□□ -0.44
GNE-204ENST00000539208 CLPSL2Q6UWE3 100 aa12.3□□□□□ -0.44
GNE-204ENST00000539208 ATRQ13535 2644 aa12.3□□□□□ -0.44
GNE-204ENST00000539208 LINC00337Q8N6G1 96 aa12.3□□□□□ -0.44
GNE-204ENST00000539208 TRACP01848 142 aa12.29□□□□□ -0.44
GNE-204ENST00000539208 REG3AQ06141 175 aa12.29□□□□□ -0.44
GNE-204ENST00000539208 LELP1Q5T871 98 aa12.29□□□□□ -0.44
GNE-204ENST00000539208 ANGP03950 147 aaKnown RBP12.29□□□□□ -0.44
GNE-204ENST00000539208 PFN2P35080 140 aa12.29□□□□□ -0.44
GNE-204ENST00000539208 CHCHD10Q8WYQ3 142 aaPredicted RBP12.29□□□□□ -0.44
GNE-204ENST00000539208 DEFB121Q5J5C9 76 aa12.28□□□□□ -0.44
GNE-204ENST00000539208 KIAA0087Q14695 138 aa12.27□□□□□ -0.45
GNE-204ENST00000539208 CXCL5P42830 114 aa12.26□□□□□ -0.45
GNE-204ENST00000539208 HTN3P15516 51 aa12.25□□□□□ -0.45
GNE-204ENST00000539208 XGP55808 180 aa12.25□□□□□ -0.45
GNE-204ENST00000539208 CKS1BP61024 79 aa12.25□□□□□ -0.45
GNE-204ENST00000539208 Q8N3U1 123 aa12.25□□□□□ -0.45
GNE-204ENST00000539208 COX17Q14061 63 aa12.25□□□□□ -0.45
GNE-204ENST00000539208 C11orf68Q9H3H3 251 aaKnown RBP12.25□□□□□ -0.45
GNE-204ENST00000539208 MT-ATP8P03928 68 aa12.23□□□□□ -0.45
GNE-204ENST00000539208 KRTAP10-11P60412 298 aa12.23□□□□□ -0.45
GNE-204ENST00000539208 OXLD1Q5BKU9 147 aa12.23□□□□□ -0.45
GNE-204ENST00000539208 CFAP161Q6P656 301 aa12.23□□□□□ -0.45
GNE-204ENST00000539208 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
GNE-204ENST00000539208 MALP21145 153 aa12.22□□□□□ -0.45
GNE-204ENST00000539208 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
GNE-204ENST00000539208 FAM218AQ96MZ4 157 aa12.22□□□□□ -0.45
GNE-204ENST00000539208 IGLV10-54A0A075B6I4 117 aa12.22□□□□□ -0.45
GNE-204ENST00000539208 EGFEM1PQ0D2K5 195 aa12.22□□□□□ -0.45
GNE-204ENST00000539208 PRR34Q9NV39 138 aa12.22□□□□□ -0.45
GNE-204ENST00000539208 H3BNG1 76 aa12.21□□□□□ -0.45
GNE-204ENST00000539208 TRRAPQ9Y4A5 3859 aa12.21□□□□□ -0.46
GNE-204ENST00000539208 H0YGX0 51 aa12.2□□□□□ -0.46
GNE-204ENST00000539208 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
GNE-204ENST00000539208 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
GNE-204ENST00000539208 FAM240AA0A1B0GVK7 77 aa12.19□□□□□ -0.46
GNE-204ENST00000539208 KRTAP24-1Q3LI83 254 aa12.19□□□□□ -0.46
GNE-204ENST00000539208 BAALC-AS2P0C853 105 aa12.18□□□□□ -0.46
GNE-204ENST00000539208 NDUFC2O95298 119 aa12.18□□□□□ -0.46
GNE-204ENST00000539208 MUC7Q8TAX7 377 aa12.16□□□□□ -0.46
GNE-204ENST00000539208 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
GNE-204ENST00000539208 ENHOQ6UWT2 76 aa12.15□□□□□ -0.46
GNE-204ENST00000539208 OR13C6PQ8NH95 151 aa12.15□□□□□ -0.46
GNE-204ENST00000539208 RETNQ9HD89 108 aa12.15□□□□□ -0.47
GNE-204ENST00000539208 C22orf24Q9Y442 160 aa12.15□□□□□ -0.47
GNE-204ENST00000539208 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
GNE-204ENST00000539208 A0A087WYN8 130 aa12.12□□□□□ -0.47
GNE-204ENST00000539208 SPAG11BQ08648 103 aa12.12□□□□□ -0.47
GNE-204ENST00000539208 KPRPQ5T749 579 aaPredicted RBP12.12□□□□□ -0.47
GNE-204ENST00000539208 A0A0J9YWU9 116 aa12.12□□□□□ -0.47
GNE-204ENST00000539208 F8P00451 2351 aa12.11□□□□□ -0.47
GNE-204ENST00000539208 DNAL4O96015 105 aa12.11□□□□□ -0.47
GNE-204ENST00000539208 ACYP1P07311 99 aa12.11□□□□□ -0.47
GNE-204ENST00000539208 Q9HAA7 133 aa12.11□□□□□ -0.47
GNE-204ENST00000539208 SNCGO76070 127 aa12.11□□□□□ -0.47
GNE-204ENST00000539208 C9orf116Q5BN46 136 aaPredicted RBP12.11□□□□□ -0.47
GNE-204ENST00000539208 UNQ6190/PRO20217Q6UXQ8 127 aa12.09□□□□□ -0.47
GNE-204ENST00000539208 Q6ZTC4 211 aa12.09□□□□□ -0.47
GNE-204ENST00000539208 TMEM126AQ9H061 195 aa12.09□□□□□ -0.47
GNE-204ENST00000539208 NANOS2P60321 138 aaKnown RBP12.09□□□□□ -0.47
GNE-204ENST00000539208 GVQW2A0A096LPI5 108 aaPredicted RBP12.08□□□□□ -0.48
GNE-204ENST00000539208 CYSRT1A8MQ03 144 aa12.08□□□□□ -0.48
GNE-204ENST00000539208 C10orf25Q5T742 122 aa12.08□□□□□ -0.48
GNE-204ENST00000539208 C6orf223Q8N319 242 aa12.08□□□□□ -0.48
GNE-204ENST00000539208 INAFM2P0DMQ5 153 aa12.08□□□□□ -0.48
GNE-204ENST00000539208 C15orf53Q8NAA6 179 aa12.08□□□□□ -0.48
GNE-204ENST00000539208 PRR3P79522 188 aaKnown RBP12.07□□□□□ -0.48
GNE-204ENST00000539208 A0A1B0GX51 115 aa12.06□□□□□ -0.48
GNE-204ENST00000539208 LECT2O14960 151 aa12.06□□□□□ -0.48
GNE-204ENST00000539208 Q6Q795 121 aa12.06□□□□□ -0.48
GNE-204ENST00000539208 WFDC10BQ8IUB3 73 aa12.06□□□□□ -0.48
GNE-204ENST00000539208 A0A1B0GV72 72 aa12.05□□□□□ -0.48
GNE-204ENST00000539208 GAGE2BQ13066 116 aa12.04□□□□□ -0.48
GNE-204ENST00000539208 GAGE2EQ4V326 116 aa12.04□□□□□ -0.48
GNE-204ENST00000539208 GAGE2DQ9UEU5 116 aa12.04□□□□□ -0.48
GNE-204ENST00000539208 LINC00167Q96N53 147 aa12.03□□□□□ -0.48
GNE-204ENST00000539208 Q8NDZ9 215 aa12.03□□□□□ -0.48
GNE-204ENST00000539208 OBSCN-AS1Q96MR7 158 aa12.03□□□□□ -0.48
GNE-204ENST00000539208 ESRGQ1W209 222 aa12.02□□□□□ -0.48
GNE-204ENST00000539208 KRTAP26-1Q6PEX3 210 aa12.02□□□□□ -0.48
GNE-204ENST00000539208 LINC00526Q96FQ7 95 aa12.02□□□□□ -0.48
GNE-204ENST00000539208 C11orf45Q8TAV5 145 aa12.01□□□□□ -0.49
GNE-204ENST00000539208 FBN1P35555 2871 aaKnown RBP12□□□□□ -0.49
GNE-204ENST00000539208 DEFB131BA0A096LNP1 70 aa12□□□□□ -0.49
GNE-204ENST00000539208 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
GNE-204ENST00000539208 ORMDL1Q9P0S3 153 aa12□□□□□ -0.49
GNE-204ENST00000539208 C6orf48Q9UBA6 75 aa12□□□□□ -0.49
GNE-204ENST00000539208 NCR3O14931 201 aa11.99□□□□□ -0.49
GNE-204ENST00000539208 TTC32Q5I0X7 151 aa11.99□□□□□ -0.49
GNE-204ENST00000539208 Q8N814 137 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms