RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 HIST1H2BCP62807 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 MRPS36P82909 103 aaKnown RBP3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST2H2BEQ16778 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 TTC32Q5I0X7 151 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 COA6Q5JTJ3 125 aaKnown RBP3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.25□□□□□ -1.89
SSPN-206ENST00000539019 FAM19A3Q7Z5A8 133 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 UBE2DNLQ8IWF7 75 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST1H2BHQ93079 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 AMELXQ99217 191 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST1H2BNQ99877 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST1H2BMQ99879 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 KLK12Q9UKR0 248 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 TNXBP22105 4242 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 LRP1Q07954 4544 aaKnown RBP3.25□□□□□ -1.89
SSPN-206ENST00000539019 LOC389332A0A1B0GUA5 103 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 K7EMI3 77 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 PMCHP20382 165 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 Q0VG73 95 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 PDZD11Q5EBL8 140 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 C1orf134Q5TEV5 83 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 Q6ZUT4 128 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
SSPN-206ENST00000539019 HIST3H2BBQ8N257 126 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 LINC00269Q8N2A0 174 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 C10orf126Q8N4M7 172 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 TOMM6Q96B49 74 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 TRAPPC1Q9Y5R8 145 aa3.25□□□□□ -1.89
SSPN-206ENST00000539019 IGHV3OR16-9A0A0B4J2B5 98 aa3.24□□□□□ -1.89
SSPN-206ENST00000539019 ZNF25P17030 456 aaPredicted RBP3.24□□□□□ -1.89
SSPN-206ENST00000539019 FUSP35637 526 aaKnown RBP eCLIP3.24□□□□□ -1.89
SSPN-206ENST00000539019 REG3AQ06141 175 aa3.24□□□□□ -1.89
SSPN-206ENST00000539019 LINC00336Q6ZUF6 198 aa3.24□□□□□ -1.89
SSPN-206ENST00000539019 ZNF664Q8N3J9 261 aa3.24□□□□□ -1.89
SSPN-206ENST00000539019 C15orf56Q8N910 161 aa3.24□□□□□ -1.89
SSPN-206ENST00000539019 UBE2WQ96B02 151 aa3.24□□□□□ -1.89
SSPN-206ENST00000539019 MAP1LC3AQ9H492 121 aa3.24□□□□□ -1.89
SSPN-206ENST00000539019 NXT2Q9NPJ8 142 aaKnown RBP3.24□□□□□ -1.89
SSPN-206ENST00000539019 TRAV8-3A0A0A6YYJ7 113 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 LINC00959A0A1B0GUT2 108 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 PCP4L1A6NKN8 68 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 TMEM262E9PQX1 116 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 LINC00614P0C842 121 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 FABP4P15090 132 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 FCER1GP30273 86 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 COX6A2Q02221 97 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 MIAQ16674 131 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 Q1RN00 199 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 RNASE13Q5GAN3 156 aaKnown RBP3.23□□□□□ -1.89
SSPN-206ENST00000539019 C2orf66Q6UXQ4 117 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 OR5A1Q8NGJ0 315 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 OR10D4PQ8NGN7 298 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 PACRGQ96M98 296 aaPredicted RBP3.23□□□□□ -1.89
SSPN-206ENST00000539019 TIMM17AQ99595 171 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 KIR2DL4Q99706 377 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 SPANXA1Q9NS26 97 aa3.23□□□□□ -1.89
SSPN-206ENST00000539019 TRAV9-2A0A087WT02 112 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 A0A087WX48 190 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 TRAV8-4A0A0B4J246 113 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 ANGP03950 147 aaKnown RBP3.22□□□□□ -1.89
SSPN-206ENST00000539019 UBE2D1P51668 147 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 PKIAP61925 76 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 KIAA0087Q14695 138 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 JOSD1Q15040 202 aaPredicted RBP3.22□□□□□ -1.89
SSPN-206ENST00000539019 ORMDL2Q53FV1 153 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 LINC00242Q5T6M2 205 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 CLPSL2Q6UWE3 100 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 Q6ZVH6 145 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 Q8N814 137 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 BAALCQ8WXS3 180 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 HIST1H2BLQ99880 126 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 Q9HAA7 133 aa3.22□□□□□ -1.89
SSPN-206ENST00000539019 IGLV4-69A0A075B6H9 119 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 IGLV10-54A0A075B6I4 117 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 SERF1AO75920 110 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 KRTAP10-1P60331 282 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 PMCHL1Q16048 86 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 PYY3Q5JQD4 70 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 Q6ZSA8 131 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 ERASQ7Z444 233 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 CHCHD10Q8WYQ3 142 aaPredicted RBP3.21□□□□□ -1.9
SSPN-206ENST00000539019 CHCHD1Q96BP2 118 aaKnown RBP3.21□□□□□ -1.9
SSPN-206ENST00000539019 LINC00167Q96N53 147 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 ANAPC11Q9NYG5 84 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 CYSLTR1Q9Y271 337 aa3.21□□□□□ -1.9
SSPN-206ENST00000539019 SRRM2Q9UQ35 2752 aaKnown RBP3.2□□□□□ -1.9
SSPN-206ENST00000539019 IGKV2D-24A0A075B6R9 120 aa3.2□□□□□ -1.9
SSPN-206ENST00000539019 GVQW2A0A096LPI5 108 aaPredicted RBP3.2□□□□□ -1.9
SSPN-206ENST00000539019 FAM168BA1KXE4 195 aa3.2□□□□□ -1.9
SSPN-206ENST00000539019 PANO1I0J062 215 aa3.2□□□□□ -1.9
SSPN-206ENST00000539019 CCL25O15444 150 aa3.2□□□□□ -1.9
SSPN-206ENST00000539019 CNBPP62633 177 aaKnown RBP3.2□□□□□ -1.9
SSPN-206ENST00000539019 RNASEKQ6P5S7 137 aaKnown RBP3.2□□□□□ -1.9
SSPN-206ENST00000539019 CD164L2Q6UWJ8 174 aa3.2□□□□□ -1.9
SSPN-206ENST00000539019 SPATA12Q7Z6I5 190 aa3.2□□□□□ -1.9
SSPN-206ENST00000539019 CST9LQ9H4G1 147 aa3.2□□□□□ -1.9
SSPN-206ENST00000539019 HERC1Q15751 4861 aa3.19□□□□□ -1.9
SSPN-206ENST00000539019 TSTD3H0UI37 97 aa3.19□□□□□ -1.9
SSPN-206ENST00000539019 UBE2L6O14933 153 aa3.19□□□□□ -1.9
SSPN-206ENST00000539019 LECT2O14960 151 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms