RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ANKRD39Q53RE8 183 aa15.27■□□□□ 0.03
TMEM260-202ENST00000538838 C10orf25Q5T742 122 aa15.27■□□□□ 0.03
TMEM260-202ENST00000538838 UNQ6190/PRO20217Q6UXQ8 127 aa15.27■□□□□ 0.03
TMEM260-202ENST00000538838 NDUFA1O15239 70 aa15.26■□□□□ 0.03
TMEM260-202ENST00000538838 CARD19Q96LW7 228 aa15.26■□□□□ 0.03
TMEM260-202ENST00000538838 IGKV2D-26A0A0A0MRZ7 120 aa15.25■□□□□ 0.03
TMEM260-202ENST00000538838 PLEKHB2Q96CS7 222 aa15.25■□□□□ 0.03
TMEM260-202ENST00000538838 IGLV5-52A0A0A0MRZ9 124 aa15.25■□□□□ 0.03
TMEM260-202ENST00000538838 J3QQQ9 107 aa15.25■□□□□ 0.03
TMEM260-202ENST00000538838 CXCL5P42830 114 aa15.25■□□□□ 0.03
TMEM260-202ENST00000538838 F8WDY8 70 aa15.23■□□□□ 0.03
TMEM260-202ENST00000538838 CDPF1Q6NVV7 123 aa15.23■□□□□ 0.03
TMEM260-202ENST00000538838 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.22■□□□□ 0.03
TMEM260-202ENST00000538838 HSBP1L1C9JCN9 74 aa15.22■□□□□ 0.03
TMEM260-202ENST00000538838 LGALS3P17931 250 aaKnown RBP15.22■□□□□ 0.03
TMEM260-202ENST00000538838 LINC01620Q4KN68 170 aa15.22■□□□□ 0.03
TMEM260-202ENST00000538838 C6orf48Q9UBA6 75 aa15.22■□□□□ 0.03
TMEM260-202ENST00000538838 ZNF625Q96I27 306 aaPredicted RBP15.21■□□□□ 0.03
TMEM260-202ENST00000538838 PGPEP1Q9NXJ5 209 aa15.21■□□□□ 0.02
TMEM260-202ENST00000538838 NDUFA12Q9UI09 145 aa15.21■□□□□ 0.02
TMEM260-202ENST00000538838 NMUP48645 174 aa15.2■□□□□ 0.02
TMEM260-202ENST00000538838 DNAH5Q8TE73 4624 aa15.19■□□□□ 0.02
TMEM260-202ENST00000538838 C9orf163Q8N9P6 203 aa15.19■□□□□ 0.02
TMEM260-202ENST00000538838 TTTY13Q9BZ97 58 aa15.19■□□□□ 0.02
TMEM260-202ENST00000538838 C9orf116Q5BN46 136 aaPredicted RBP15.18■□□□□ 0.02
TMEM260-202ENST00000538838 TRBV30A0A0K0K1B3 111 aa15.17■□□□□ 0.02
TMEM260-202ENST00000538838 VAMP8Q9BV40 100 aa15.17■□□□□ 0.02
TMEM260-202ENST00000538838 PAM16Q9Y3D7 125 aa15.17■□□□□ 0.02
TMEM260-202ENST00000538838 SFTA2Q6UW10 78 aa15.15■□□□□ 0.02
TMEM260-202ENST00000538838 PKHD1P08F94 4074 aa15.15■□□□□ 0.02
TMEM260-202ENST00000538838 MYMXA0A1B0GTQ4 84 aa15.14■□□□□ 0.01
TMEM260-202ENST00000538838 RNF151Q2KHN1 245 aa15.14■□□□□ 0.01
TMEM260-202ENST00000538838 SPATA45Q537H7 98 aa15.14■□□□□ 0.01
TMEM260-202ENST00000538838 PCP2Q8IVA1 136 aa15.14■□□□□ 0.01
TMEM260-202ENST00000538838 ZNF815PA8K554 130 aa15.13■□□□□ 0.01
TMEM260-202ENST00000538838 GCSHP23434 173 aa15.11■□□□□ 0.01
TMEM260-202ENST00000538838 HERV-K104P63124 156 aa15.11■□□□□ 0.01
TMEM260-202ENST00000538838 ERG28Q9UKR5 140 aa15.1■□□□□ 0.01
TMEM260-202ENST00000538838 C16orf90A8MZG2 172 aa15.1■□□□□ 0.01
TMEM260-202ENST00000538838 SMIM6P0DI80 62 aa15.1■□□□□ 0.01
TMEM260-202ENST00000538838 SDIM1Q6ZPB5 146 aa15.1■□□□□ 0.01
TMEM260-202ENST00000538838 LOC107984640A0A0U1RRK4 108 aa15.09■□□□□ 0.01
TMEM260-202ENST00000538838 PFN2P35080 140 aa15.09■□□□□ 0.01
TMEM260-202ENST00000538838 RPL18AQ02543 176 aaKnown RBP15.09■□□□□ 0.01
TMEM260-202ENST00000538838 MEIG1Q5JSS6 88 aa15.08■□□□□ 0
TMEM260-202ENST00000538838 TP73-AS1Q9UF72 201 aa15.08■□□□□ 0
TMEM260-202ENST00000538838 A0A0J9YXY3 114 aa15.07■□□□□ 0
TMEM260-202ENST00000538838 KRTAP10-1P60331 282 aa15.07■□□□□ 0
TMEM260-202ENST00000538838 Q6ZRP5 223 aa15.07■□□□□ 0
TMEM260-202ENST00000538838 A0A096LNI7 61 aa15.06■□□□□ 0
TMEM260-202ENST00000538838 A0A0U1RRA0 63 aa15.06■□□□□ 0
TMEM260-202ENST00000538838 NDUFC2-KCTD14E9PQ53 114 aa15.06■□□□□ 0
TMEM260-202ENST00000538838 TLX1NBP0CAT3 122 aa15.06■□□□□ 0
TMEM260-202ENST00000538838 SMIM13P0DJ93 91 aa15.06■□□□□ 0
TMEM260-202ENST00000538838 IGKV2-24A0A0C4DH68 120 aa15.04■□□□□ -0
TMEM260-202ENST00000538838 CHTF8P0CG12 524 aa15.04■□□□□ -0
TMEM260-202ENST00000538838 GAGE2BQ13066 116 aa15.04■□□□□ -0
TMEM260-202ENST00000538838 DYNC1H1Q14204 4646 aaKnown RBP15.04■□□□□ -0
TMEM260-202ENST00000538838 EPPK1P58107 5090 aaKnown RBP15.03■□□□□ -0
TMEM260-202ENST00000538838 COX8AP10176 69 aa15.03■□□□□ -0
TMEM260-202ENST00000538838 LINC00158P58513 81 aa15.03■□□□□ -0
TMEM260-202ENST00000538838 S100A12P80511 92 aa15.03■□□□□ -0
TMEM260-202ENST00000538838 COX17Q14061 63 aa15.03■□□□□ -0
TMEM260-202ENST00000538838 GAGE2EQ4V326 116 aa15.03■□□□□ -0
TMEM260-202ENST00000538838 C14orf144Q96I85 54 aa15.03■□□□□ -0
TMEM260-202ENST00000538838 GAGE2DQ9UEU5 116 aa15.03■□□□□ -0
TMEM260-202ENST00000538838 PKIGQ9Y2B9 76 aa15.03■□□□□ -0
TMEM260-202ENST00000538838 PTTG1IPP53801 180 aa15.03■□□□□ -0
TMEM260-202ENST00000538838 PANO1I0J062 215 aa15.02□□□□□ -0.01
TMEM260-202ENST00000538838 SCGB1D4Q6XE38 83 aa15.02□□□□□ -0.01
TMEM260-202ENST00000538838 BOD1L2Q8IYS8 172 aa15.01□□□□□ -0.01
TMEM260-202ENST00000538838 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.01□□□□□ -0.01
TMEM260-202ENST00000538838 LINC00587B1AMM8 73 aa14.99□□□□□ -0.01
TMEM260-202ENST00000538838 DAND5Q8N907 189 aa14.99□□□□□ -0.01
TMEM260-202ENST00000538838 MIR7-3HGQ8N6C7 128 aa14.99□□□□□ -0.01
TMEM260-202ENST00000538838 LITAFQ99732 161 aa14.99□□□□□ -0.01
TMEM260-202ENST00000538838 XAGE1AQ9HD64 81 aa14.99□□□□□ -0.01
TMEM260-202ENST00000538838 FAM30AQ9NZY2 134 aa14.99□□□□□ -0.01
TMEM260-202ENST00000538838 LRP1BQ9NZR2 4599 aa14.98□□□□□ -0.01
TMEM260-202ENST00000538838 CIRBPQ14011 172 aaKnown RBP14.97□□□□□ -0.01
TMEM260-202ENST00000538838 ADAMTSL4-AS1Q5T5F5 129 aa14.97□□□□□ -0.01
TMEM260-202ENST00000538838 SPACA4Q8TDM5 124 aa14.97□□□□□ -0.01
TMEM260-202ENST00000538838 TIMM17BO60830 172 aa14.96□□□□□ -0.01
TMEM260-202ENST00000538838 C9orf129Q5T035 196 aaKnown RBP14.96□□□□□ -0.01
TMEM260-202ENST00000538838 Q6ZSA8 131 aa14.96□□□□□ -0.01
TMEM260-202ENST00000538838 C12orf57Q99622 126 aa14.96□□□□□ -0.01
TMEM260-202ENST00000538838 SND1-IT1Q9HBX3 110 aa14.96□□□□□ -0.01
TMEM260-202ENST00000538838 DLEU1O43261 78 aa14.95□□□□□ -0.02
TMEM260-202ENST00000538838 SLC25A34Q6PIV7 304 aa14.95□□□□□ -0.02
TMEM260-202ENST00000538838 DNAH8Q96JB1 4490 aa14.95□□□□□ -0.02
TMEM260-202ENST00000538838 LINC00474Q9P2X8 69 aa14.94□□□□□ -0.02
TMEM260-202ENST00000538838 TMEM238C9JI98 176 aa14.92□□□□□ -0.02
TMEM260-202ENST00000538838 FAM168BA1KXE4 195 aa14.91□□□□□ -0.02
TMEM260-202ENST00000538838 NPC2P61916 151 aa14.91□□□□□ -0.02
TMEM260-202ENST00000538838 HAMPP81172 84 aa14.91□□□□□ -0.02
TMEM260-202ENST00000538838 DPH3Q96FX2 82 aa14.9□□□□□ -0.02
TMEM260-202ENST00000538838 PRO1933Q9H354 126 aa14.9□□□□□ -0.02
TMEM260-202ENST00000538838 LINC00518Q8N0U6 118 aa14.89□□□□□ -0.03
TMEM260-202ENST00000538838 C2orf91Q6ZV80 131 aa14.88□□□□□ -0.03
TMEM260-202ENST00000538838 SPANXDQ9BXN6 97 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms