RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
NPIPB3-209ENST00000538439 SLPIP03973 132 aa6.75□□□□□ -1.33
NPIPB3-209ENST00000538439 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
NPIPB3-209ENST00000538439 STPG4Q8N801 248 aa6.75□□□□□ -1.33
NPIPB3-209ENST00000538439 C12orf57Q99622 126 aa6.75□□□□□ -1.33
NPIPB3-209ENST00000538439 DNAH10Q8IVF4 4471 aa6.75□□□□□ -1.33
NPIPB3-209ENST00000538439 ALMS1Q8TCU4 4167 aa6.74□□□□□ -1.33
NPIPB3-209ENST00000538439 A0A087WZ39 114 aa6.74□□□□□ -1.33
NPIPB3-209ENST00000538439 COX7A2LO14548 114 aa6.74□□□□□ -1.33
NPIPB3-209ENST00000538439 SPATA45Q537H7 98 aa6.74□□□□□ -1.33
NPIPB3-209ENST00000538439 LINC00518Q8N0U6 118 aa6.74□□□□□ -1.33
NPIPB3-209ENST00000538439 LINC01561Q8N1V8 128 aa6.74□□□□□ -1.33
NPIPB3-209ENST00000538439 E9PLD3 99 aa6.73□□□□□ -1.33
NPIPB3-209ENST00000538439 APOMO95445 188 aa6.73□□□□□ -1.33
NPIPB3-209ENST00000538439 SPINK8P0C7L1 97 aa6.73□□□□□ -1.33
NPIPB3-209ENST00000538439 VPREB1P12018 145 aa6.73□□□□□ -1.33
NPIPB3-209ENST00000538439 MAJINQ3KP22 176 aa6.73□□□□□ -1.33
NPIPB3-209ENST00000538439 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
NPIPB3-209ENST00000538439 PLEKHB2Q96CS7 222 aa6.73□□□□□ -1.33
NPIPB3-209ENST00000538439 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
NPIPB3-209ENST00000538439 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
NPIPB3-209ENST00000538439 LEPROTO15243 131 aa6.72□□□□□ -1.33
NPIPB3-209ENST00000538439 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
NPIPB3-209ENST00000538439 HECTD4Q9Y4D8 3996 aa6.71□□□□□ -1.34
NPIPB3-209ENST00000538439 IGLV5-39A0A0G2JS06 123 aa6.71□□□□□ -1.34
NPIPB3-209ENST00000538439 SMIM1B2RUZ4 78 aa6.71□□□□□ -1.34
NPIPB3-209ENST00000538439 M0R2N4 97 aa6.71□□□□□ -1.34
NPIPB3-209ENST00000538439 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-209ENST00000538439 NMUP48645 174 aa6.71□□□□□ -1.34
NPIPB3-209ENST00000538439 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.34
NPIPB3-209ENST00000538439 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.34
NPIPB3-209ENST00000538439 J3QQQ9 107 aa6.7□□□□□ -1.34
NPIPB3-209ENST00000538439 PSCAO43653 123 aa6.7□□□□□ -1.34
NPIPB3-209ENST00000538439 PRSS2P07478 247 aa6.7□□□□□ -1.34
NPIPB3-209ENST00000538439 KRTAP26-1Q6PEX3 210 aa6.7□□□□□ -1.34
NPIPB3-209ENST00000538439 TOMM7Q9P0U1 55 aa6.7□□□□□ -1.34
NPIPB3-209ENST00000538439 IGKV2D-26A0A0A0MRZ7 120 aa6.69□□□□□ -1.34
NPIPB3-209ENST00000538439 COX7B2Q8TF08 81 aa6.69□□□□□ -1.34
NPIPB3-209ENST00000538439 ORAOV1Q8WV07 137 aa6.69□□□□□ -1.34
NPIPB3-209ENST00000538439 COX8AP10176 69 aa6.68□□□□□ -1.34
NPIPB3-209ENST00000538439 C6orf226Q5I0X4 101 aa6.68□□□□□ -1.34
NPIPB3-209ENST00000538439 Q6ZR54 194 aa6.68□□□□□ -1.34
NPIPB3-209ENST00000538439 Q8IZM0 81 aa6.68□□□□□ -1.34
NPIPB3-209ENST00000538439 C6orf223Q8N319 242 aa6.68□□□□□ -1.34
NPIPB3-209ENST00000538439 C14orf144Q96I85 54 aa6.68□□□□□ -1.34
NPIPB3-209ENST00000538439 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
NPIPB3-209ENST00000538439 TSTD3H0UI37 97 aa6.67□□□□□ -1.34
NPIPB3-209ENST00000538439 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
NPIPB3-209ENST00000538439 SLC25A34Q6PIV7 304 aa6.67□□□□□ -1.34
NPIPB3-209ENST00000538439 SFTA2Q6UW10 78 aa6.67□□□□□ -1.34
NPIPB3-209ENST00000538439 KMT2AQ03164 3969 aa6.67□□□□□ -1.34
NPIPB3-209ENST00000538439 MYMXA0A1B0GTQ4 84 aa6.66□□□□□ -1.34
NPIPB3-209ENST00000538439 CXCL5P42830 114 aa6.66□□□□□ -1.34
NPIPB3-209ENST00000538439 CKS1BP61024 79 aa6.66□□□□□ -1.34
NPIPB3-209ENST00000538439 C1orf134Q5TEV5 83 aa6.66□□□□□ -1.34
NPIPB3-209ENST00000538439 PCP2Q8IVA1 136 aa6.66□□□□□ -1.34
NPIPB3-209ENST00000538439 PRO1933Q9H354 126 aa6.66□□□□□ -1.34
NPIPB3-209ENST00000538439 UQCR10Q9UDW1 63 aa6.66□□□□□ -1.34
NPIPB3-209ENST00000538439 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
NPIPB3-209ENST00000538439 DLEU1O43261 78 aa6.65□□□□□ -1.34
NPIPB3-209ENST00000538439 TSPEAR-AS2P59090 65 aa6.65□□□□□ -1.34
NPIPB3-209ENST00000538439 HERV-K104P63124 156 aa6.65□□□□□ -1.34
NPIPB3-209ENST00000538439 C14orf177Q52M58 125 aa6.65□□□□□ -1.34
NPIPB3-209ENST00000538439 BOD1L2Q8IYS8 172 aa6.65□□□□□ -1.34
NPIPB3-209ENST00000538439 MAPKAPK5-AS1Q8N8E1 139 aa6.65□□□□□ -1.34
NPIPB3-209ENST00000538439 TTTY13Q9BZ97 58 aa6.65□□□□□ -1.34
NPIPB3-209ENST00000538439 F8WDY8 70 aa6.64□□□□□ -1.35
NPIPB3-209ENST00000538439 NDUFA1O15239 70 aa6.64□□□□□ -1.35
NPIPB3-209ENST00000538439 SEC61BP60468 96 aaKnown RBP6.64□□□□□ -1.35
NPIPB3-209ENST00000538439 KIAA0087Q14695 138 aa6.64□□□□□ -1.35
NPIPB3-209ENST00000538439 HIGD2BQ4VC39 106 aa6.64□□□□□ -1.35
NPIPB3-209ENST00000538439 SCGB1D4Q6XE38 83 aa6.64□□□□□ -1.35
NPIPB3-209ENST00000538439 C15orf56Q8N910 161 aa6.64□□□□□ -1.35
NPIPB3-209ENST00000538439 MIEN1Q9BRT3 115 aa6.64□□□□□ -1.35
NPIPB3-209ENST00000538439 GVQW2A0A096LPI5 108 aaPredicted RBP6.63□□□□□ -1.35
NPIPB3-209ENST00000538439 LINC00587B1AMM8 73 aa6.63□□□□□ -1.35
NPIPB3-209ENST00000538439 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
NPIPB3-209ENST00000538439 NTN5Q8WTR8 489 aaPredicted RBP6.63□□□□□ -1.35
NPIPB3-209ENST00000538439 C2orf48Q96LS8 159 aa6.63□□□□□ -1.35
NPIPB3-209ENST00000538439 CAMK2N2Q96S95 79 aa6.63□□□□□ -1.35
NPIPB3-209ENST00000538439 LECT2O14960 151 aa6.62□□□□□ -1.35
NPIPB3-209ENST00000538439 CIRBPQ14011 172 aaKnown RBP6.62□□□□□ -1.35
NPIPB3-209ENST00000538439 ZNF625Q96I27 306 aaPredicted RBP6.62□□□□□ -1.35
NPIPB3-209ENST00000538439 A0A0J9YXY3 114 aa6.61□□□□□ -1.35
NPIPB3-209ENST00000538439 HNRNPA3P51991 378 aaKnown RBP6.61□□□□□ -1.35
NPIPB3-209ENST00000538439 GAGE2BQ13066 116 aa6.61□□□□□ -1.35
NPIPB3-209ENST00000538439 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
NPIPB3-209ENST00000538439 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
NPIPB3-209ENST00000538439 GAGE2AQ6NT46 116 aa6.61□□□□□ -1.35
NPIPB3-209ENST00000538439 C2orf82Q6UX34 121 aa6.61□□□□□ -1.35
NPIPB3-209ENST00000538439 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
NPIPB3-209ENST00000538439 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
NPIPB3-209ENST00000538439 SYCNQ0VAF6 134 aa6.6□□□□□ -1.35
NPIPB3-209ENST00000538439 UNQ6190/PRO20217Q6UXQ8 127 aa6.6□□□□□ -1.35
NPIPB3-209ENST00000538439 HIGD1BQ9P298 99 aa6.6□□□□□ -1.35
NPIPB3-209ENST00000538439 VPS13DQ5THJ4 4388 aa6.6□□□□□ -1.35
NPIPB3-209ENST00000538439 TRBV30A0A0K0K1B3 111 aa6.59□□□□□ -1.35
NPIPB3-209ENST00000538439 LRCOL1A6NCL2 159 aa6.59□□□□□ -1.35
NPIPB3-209ENST00000538439 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
NPIPB3-209ENST00000538439 TIMM17BO60830 172 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms