RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TSPEAR-AS2P59090 65 aa3.75□□□□□ -1.81
LRP6-203ENST00000538239 C2orf48Q96LS8 159 aa3.75□□□□□ -1.81
LRP6-203ENST00000538239 WWC2-AS2Q96NR7 200 aa3.75□□□□□ -1.81
LRP6-203ENST00000538239 CSDC2Q9Y534 153 aaKnown RBP3.74□□□□□ -1.81
LRP6-203ENST00000538239 X6R8D5 127 aa3.74□□□□□ -1.81
LRP6-203ENST00000538239 C16orf90A8MZG2 172 aa3.74□□□□□ -1.81
LRP6-203ENST00000538239 AMELXQ99217 191 aa3.74□□□□□ -1.81
LRP6-203ENST00000538239 IGHV6-1A0A0B4J1U7 121 aa3.74□□□□□ -1.81
LRP6-203ENST00000538239 LINC00315P59091 139 aa3.74□□□□□ -1.81
LRP6-203ENST00000538239 FAM30AQ9NZY2 134 aa3.74□□□□□ -1.81
LRP6-203ENST00000538239 C2orf91Q6ZV80 131 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 URB1-AS1Q96HZ7 61 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 F8WDY8 70 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 LST1O00453 97 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 DNAH12Q6ZR08 3092 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 A0A087WYN8 130 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 COX8CQ7Z4L0 72 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 C22orf24Q9Y442 160 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 KRTAP10-11P60412 298 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 Q8N3U1 123 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 PRYO14603 147 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 RTL8CO15255 209 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 ADAMTSL4-AS1Q5T5F5 129 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 Q8N814 137 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 FAM229AH3BQW9 127 aa3.73□□□□□ -1.81
LRP6-203ENST00000538239 FAM236DA0A1B0GTK5 79 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 A8MTW9 85 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 FAM236CP0DP71 79 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 NBDYA0A0U1RRE5 68 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 C3orf22Q8N5N4 141 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 FAM19A3Q7Z5A8 133 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 LRRK2Q5S007 2527 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 DEFB116Q30KQ4 102 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 Q8NAQ8 132 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 LINC00588Q9Y4M8 146 aa3.72□□□□□ -1.81
LRP6-203ENST00000538239 NTM-AS1Q6ZSK4 140 aa3.71□□□□□ -1.81
LRP6-203ENST00000538239 C20orf197Q8N268 126 aa3.71□□□□□ -1.81
LRP6-203ENST00000538239 FAM19A4Q96LR4 140 aa3.71□□□□□ -1.81
LRP6-203ENST00000538239 CHTF8P0CG12 524 aa3.71□□□□□ -1.82
LRP6-203ENST00000538239 ATP5EP2Q5VTU8 51 aa3.71□□□□□ -1.82
LRP6-203ENST00000538239 Q6ZVQ6 151 aa3.71□□□□□ -1.82
LRP6-203ENST00000538239 TLN1Q9Y490 2541 aaKnown RBP3.71□□□□□ -1.82
LRP6-203ENST00000538239 KRTAP10-3P60369 221 aa3.71□□□□□ -1.82
LRP6-203ENST00000538239 MT-ATP8P03928 68 aa3.71□□□□□ -1.82
LRP6-203ENST00000538239 SMCR5Q8TEV8 140 aa3.71□□□□□ -1.82
LRP6-203ENST00000538239 K7EIL1 84 aa3.71□□□□□ -1.82
LRP6-203ENST00000538239 LINC00337Q8N6G1 96 aa3.71□□□□□ -1.82
LRP6-203ENST00000538239 PHF5AQ7RTV0 110 aaKnown RBP3.7□□□□□ -1.82
LRP6-203ENST00000538239 KIF25-AS1Q9Y6Z4 181 aa3.7□□□□□ -1.82
LRP6-203ENST00000538239 LINC01561Q8N1V8 128 aa3.7□□□□□ -1.82
LRP6-203ENST00000538239 SNURFQ9Y675 71 aa3.7□□□□□ -1.82
LRP6-203ENST00000538239 PRR4Q16378 134 aa3.7□□□□□ -1.82
LRP6-203ENST00000538239 LINC00310P59036 64 aa3.69□□□□□ -1.82
LRP6-203ENST00000538239 H3BNG1 76 aa3.69□□□□□ -1.82
LRP6-203ENST00000538239 LIMD2Q9BT23 127 aa3.69□□□□□ -1.82
LRP6-203ENST00000538239 Q6JHZ5 121 aa3.69□□□□□ -1.82
LRP6-203ENST00000538239 MPLKIPQ8TAP9 179 aa3.69□□□□□ -1.82
LRP6-203ENST00000538239 ANKRD11Q6UB99 2663 aaPredicted RBP3.69□□□□□ -1.82
LRP6-203ENST00000538239 A0A087WSZ3 146 aa3.69□□□□□ -1.82
LRP6-203ENST00000538239 SPACA4Q8TDM5 124 aa3.69□□□□□ -1.82
LRP6-203ENST00000538239 Q9UF83 564 aa3.69□□□□□ -1.82
LRP6-203ENST00000538239 C6orf48Q9UBA6 75 aa3.69□□□□□ -1.82
LRP6-203ENST00000538239 ZNF462Q96JM2 2506 aa3.68□□□□□ -1.82
LRP6-203ENST00000538239 NDUFC2O95298 119 aa3.68□□□□□ -1.82
LRP6-203ENST00000538239 A0A096LNJ9 63 aa3.68□□□□□ -1.82
LRP6-203ENST00000538239 A0A096LNT2 108 aa3.68□□□□□ -1.82
LRP6-203ENST00000538239 MOBPQ13875 183 aa3.68□□□□□ -1.82
LRP6-203ENST00000538239 LINC00167Q96N53 147 aa3.68□□□□□ -1.82
LRP6-203ENST00000538239 J3QL48 77 aa3.68□□□□□ -1.82
LRP6-203ENST00000538239 Q8N9L7 120 aa3.67□□□□□ -1.82
LRP6-203ENST00000538239 SPTBN4Q9H254 2564 aa3.67□□□□□ -1.82
LRP6-203ENST00000538239 SPATA3Q8NHX4 192 aa3.67□□□□□ -1.82
LRP6-203ENST00000538239 LINC00575Q6W349 94 aa3.67□□□□□ -1.82
LRP6-203ENST00000538239 SERP1Q9Y6X1 66 aa3.66□□□□□ -1.82
LRP6-203ENST00000538239 KRTAP1-3Q8IUG1 177 aa3.66□□□□□ -1.82
LRP6-203ENST00000538239 JMJD1CQ15652 2540 aa3.66□□□□□ -1.82
LRP6-203ENST00000538239 LINC01547P58512 204 aaPredicted RBP3.66□□□□□ -1.82
LRP6-203ENST00000538239 Q6Q795 121 aa3.66□□□□□ -1.82
LRP6-203ENST00000538239 PLA2G1BP04054 148 aaKnown RBP3.66□□□□□ -1.82
LRP6-203ENST00000538239 IGHV3OR16-9A0A0B4J2B5 98 aa3.66□□□□□ -1.82
LRP6-203ENST00000538239 J3KT08 172 aa3.66□□□□□ -1.82
LRP6-203ENST00000538239 RPL37AP61513 92 aaKnown RBP3.66□□□□□ -1.82
LRP6-203ENST00000538239 KIAA0087Q14695 138 aa3.66□□□□□ -1.82
LRP6-203ENST00000538239 PRR15LQ9BU68 103 aa3.66□□□□□ -1.82
LRP6-203ENST00000538239 K7ERS5 55 aa3.65□□□□□ -1.82
LRP6-203ENST00000538239 TYMSOSQ8TAI1 123 aa3.65□□□□□ -1.82
LRP6-203ENST00000538239 Q6ZRP5 223 aa3.65□□□□□ -1.82
LRP6-203ENST00000538239 SPTSSBQ8NFR3 76 aa3.65□□□□□ -1.83
LRP6-203ENST00000538239 DNAH10OSP0CZ25 163 aa3.65□□□□□ -1.83
LRP6-203ENST00000538239 ABCA12Q86UK0 2595 aa3.65□□□□□ -1.83
LRP6-203ENST00000538239 ZFYVE26Q68DK2 2539 aa3.65□□□□□ -1.83
LRP6-203ENST00000538239 SPINK1P00995 79 aa3.65□□□□□ -1.83
LRP6-203ENST00000538239 ANKRD17O75179 2603 aaKnown RBP3.65□□□□□ -1.83
LRP6-203ENST00000538239 PCOTHQ58A44 107 aa3.64□□□□□ -1.83
LRP6-203ENST00000538239 MYO18BQ8IUG5 2567 aa3.64□□□□□ -1.83
LRP6-203ENST00000538239 CHD8Q9HCK8 2581 aa3.64□□□□□ -1.83
LRP6-203ENST00000538239 UQCRQO14949 82 aa3.64□□□□□ -1.83
LRP6-203ENST00000538239 LINC00208Q96KT6 92 aa3.64□□□□□ -1.83
LRP6-203ENST00000538239 C19orf73Q9NVV2 129 aa3.64□□□□□ -1.83
LRP6-203ENST00000538239 CEP295Q9C0D2 2601 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 240.1 ms