RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 PDZD11Q5EBL8 140 aa9.32□□□□□ -0.92
LRRK1-211ENST00000538064 PACRGQ96M98 296 aaPredicted RBP9.32□□□□□ -0.92
LRRK1-211ENST00000538064 A0A0J9YXV3 536 aa9.31□□□□□ -0.92
LRRK1-211ENST00000538064 TINCRA0A1B0GVN0 87 aa9.31□□□□□ -0.92
LRRK1-211ENST00000538064 NDUFA6P56556 154 aa9.31□□□□□ -0.92
LRRK1-211ENST00000538064 PLA2G2DQ9UNK4 145 aa9.31□□□□□ -0.92
LRRK1-211ENST00000538064 GAGE2BQ13066 116 aa9.29□□□□□ -0.92
LRRK1-211ENST00000538064 LINC00469Q8N7U9 141 aa9.29□□□□□ -0.92
LRRK1-211ENST00000538064 CDKN2A-AS1Q9UH64 79 aa9.29□□□□□ -0.92
LRRK1-211ENST00000538064 NDUFA1O15239 70 aa9.28□□□□□ -0.92
LRRK1-211ENST00000538064 SERF1AO75920 110 aa9.28□□□□□ -0.92
LRRK1-211ENST00000538064 PRSS2P07478 247 aa9.28□□□□□ -0.92
LRRK1-211ENST00000538064 UBR4Q5T4S7 5183 aa9.28□□□□□ -0.92
LRRK1-211ENST00000538064 H3BRM9 83 aa9.27□□□□□ -0.93
LRRK1-211ENST00000538064 RNF151Q2KHN1 245 aa9.27□□□□□ -0.93
LRRK1-211ENST00000538064 FAM19A2Q8N3H0 131 aa9.27□□□□□ -0.93
LRRK1-211ENST00000538064 IFI27L1Q96BM0 104 aa9.27□□□□□ -0.93
LRRK1-211ENST00000538064 MRPL35Q9NZE8 188 aaKnown RBP9.27□□□□□ -0.93
LRRK1-211ENST00000538064 IGLV5-45A0A087WSX0 123 aa9.26□□□□□ -0.93
LRRK1-211ENST00000538064 ATP6V1G1O75348 118 aa9.26□□□□□ -0.93
LRRK1-211ENST00000538064 IGLC3P0DOY3 106 aa9.26□□□□□ -0.93
LRRK1-211ENST00000538064 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
LRRK1-211ENST00000538064 Q6ZRP5 223 aa9.26□□□□□ -0.93
LRRK1-211ENST00000538064 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
LRRK1-211ENST00000538064 A0A1W2PNN7 141 aa9.25□□□□□ -0.93
LRRK1-211ENST00000538064 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
LRRK1-211ENST00000538064 KIAA0087Q14695 138 aa9.25□□□□□ -0.93
LRRK1-211ENST00000538064 C6orf226Q5I0X4 101 aa9.25□□□□□ -0.93
LRRK1-211ENST00000538064 SPINK6Q6UWN8 80 aa9.25□□□□□ -0.93
LRRK1-211ENST00000538064 LINC01600Q96MT4 127 aa9.25□□□□□ -0.93
LRRK1-211ENST00000538064 TRAV12-1A0A0B4J245 112 aa9.24□□□□□ -0.93
LRRK1-211ENST00000538064 CKS1BP61024 79 aa9.24□□□□□ -0.93
LRRK1-211ENST00000538064 Q8IZM0 81 aa9.24□□□□□ -0.93
LRRK1-211ENST00000538064 HSPB8Q9UJY1 196 aa9.24□□□□□ -0.93
LRRK1-211ENST00000538064 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 LINC00310P59036 64 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 C9orf116Q5BN46 136 aaPredicted RBP9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.23□□□□□ -0.93
LRRK1-211ENST00000538064 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST1H2BHQ93079 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST1H2BNQ99877 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 HIST1H2BMQ99879 126 aa9.23□□□□□ -0.93
LRRK1-211ENST00000538064 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
LRRK1-211ENST00000538064 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
LRRK1-211ENST00000538064 SMIM1B2RUZ4 78 aa9.22□□□□□ -0.93
LRRK1-211ENST00000538064 CXCL5P42830 114 aa9.22□□□□□ -0.93
LRRK1-211ENST00000538064 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
LRRK1-211ENST00000538064 NUPR1O60356 82 aa9.21□□□□□ -0.94
LRRK1-211ENST00000538064 SPINK8P0C7L1 97 aa9.21□□□□□ -0.94
LRRK1-211ENST00000538064 TLX1NBP0CAT3 122 aa9.21□□□□□ -0.94
LRRK1-211ENST00000538064 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.94
LRRK1-211ENST00000538064 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
LRRK1-211ENST00000538064 C6orf48Q9UBA6 75 aa9.21□□□□□ -0.94
LRRK1-211ENST00000538064 F8VRH5 84 aa9.2□□□□□ -0.94
LRRK1-211ENST00000538064 ZNF22P17026 224 aaPredicted RBP9.2□□□□□ -0.94
LRRK1-211ENST00000538064 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
LRRK1-211ENST00000538064 C2orf82Q6UX34 121 aa9.2□□□□□ -0.94
LRRK1-211ENST00000538064 COX7B2Q8TF08 81 aa9.2□□□□□ -0.94
LRRK1-211ENST00000538064 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
LRRK1-211ENST00000538064 FABP4P15090 132 aa9.19□□□□□ -0.94
LRRK1-211ENST00000538064 PSORS1C2Q9UIG4 136 aa9.19□□□□□ -0.94
LRRK1-211ENST00000538064 H0Y8G0 127 aa9.18□□□□□ -0.94
LRRK1-211ENST00000538064 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
LRRK1-211ENST00000538064 MAP1LC3CQ9BXW4 147 aa9.17□□□□□ -0.94
LRRK1-211ENST00000538064 IGLV5-39A0A0G2JS06 123 aa9.15□□□□□ -0.94
LRRK1-211ENST00000538064 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
LRRK1-211ENST00000538064 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
LRRK1-211ENST00000538064 KRTAP10-8P60410 259 aa9.15□□□□□ -0.94
LRRK1-211ENST00000538064 ODF1Q14990 250 aa9.15□□□□□ -0.94
LRRK1-211ENST00000538064 COA6Q5JTJ3 125 aaKnown RBP9.15□□□□□ -0.94
LRRK1-211ENST00000538064 GAGE2EQ4V326 116 aa9.14□□□□□ -0.95
LRRK1-211ENST00000538064 C1orf137Q5JT78 98 aa9.14□□□□□ -0.95
LRRK1-211ENST00000538064 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
LRRK1-211ENST00000538064 FAM19A5Q7Z5A7 132 aaPredicted RBP9.14□□□□□ -0.95
LRRK1-211ENST00000538064 GAGE2DQ9UEU5 116 aa9.14□□□□□ -0.95
LRRK1-211ENST00000538064 TMEM223A0PJW6 202 aa9.13□□□□□ -0.95
LRRK1-211ENST00000538064 PLNP26678 52 aa9.13□□□□□ -0.95
LRRK1-211ENST00000538064 LRP2P98164 4655 aa9.12□□□□□ -0.95
LRRK1-211ENST00000538064 DPM2O94777 84 aa9.11□□□□□ -0.95
LRRK1-211ENST00000538064 KRTAP7-1Q8IUC3 87 aa9.11□□□□□ -0.95
LRRK1-211ENST00000538064 M0QXV9 152 aa9.1□□□□□ -0.95
LRRK1-211ENST00000538064 IGKCP01834 107 aa9.1□□□□□ -0.95
LRRK1-211ENST00000538064 IGLV7-43P04211 117 aa9.1□□□□□ -0.95
LRRK1-211ENST00000538064 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
LRRK1-211ENST00000538064 KRTAP11-1Q8IUC1 163 aa9.1□□□□□ -0.95
LRRK1-211ENST00000538064 SYS1-DBNDD2H3BUS1 97 aa9.09□□□□□ -0.95
LRRK1-211ENST00000538064 HERVK_113P61574 105 aa9.09□□□□□ -0.95
LRRK1-211ENST00000538064 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
LRRK1-211ENST00000538064 PMCHL2Q9BQD1 86 aa9.08□□□□□ -0.96
LRRK1-211ENST00000538064 UBE2BP63146 152 aa9.07□□□□□ -0.96
LRRK1-211ENST00000538064 PET117Q6UWS5 81 aa9.07□□□□□ -0.96
LRRK1-211ENST00000538064 H0Y9J4 135 aa9.06□□□□□ -0.96
LRRK1-211ENST00000538064 COX17Q14061 63 aa9.06□□□□□ -0.96
LRRK1-211ENST00000538064 ZNF625Q96I27 306 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms