RNA–Protein interactions for RNA: ENST00000537750.5

SYNE1-236, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-236ENST00000537750 Q6YL49 198 aa10.4□□□□□ -0.75
SYNE1-236ENST00000537750 MYO18BQ8IUG5 2567 aa10.39□□□□□ -0.75
SYNE1-236ENST00000537750 LRRK2Q5S007 2527 aa10.39□□□□□ -0.75
SYNE1-236ENST00000537750 C11orf44Q8N8P7 122 aa10.39□□□□□ -0.75
SYNE1-236ENST00000537750 DOPEY1Q5JWR5 2465 aa10.39□□□□□ -0.75
SYNE1-236ENST00000537750 Q8N814 137 aa10.39□□□□□ -0.75
SYNE1-236ENST00000537750 TRGV4A0A0C4DH28 118 aa10.38□□□□□ -0.75
SYNE1-236ENST00000537750 XCL1P47992 114 aa10.38□□□□□ -0.75
SYNE1-236ENST00000537750 FN1P02751 2386 aaKnown RBP10.38□□□□□ -0.75
SYNE1-236ENST00000537750 NAV2Q8IVL1 2488 aa10.38□□□□□ -0.75
SYNE1-236ENST00000537750 SONP18583 2426 aaKnown RBP10.38□□□□□ -0.75
SYNE1-236ENST00000537750 TRBV6-8A0A0A6YYG3 113 aa10.38□□□□□ -0.75
SYNE1-236ENST00000537750 C4orf3Q8WVX3 66 aa10.37□□□□□ -0.75
SYNE1-236ENST00000537750 PLAC8L1A1L4L8 177 aa10.37□□□□□ -0.75
SYNE1-236ENST00000537750 JMJD7-PLA2G4BH0Y9G9 81 aa10.37□□□□□ -0.75
SYNE1-236ENST00000537750 LINC00959A0A1B0GUT2 108 aa10.36□□□□□ -0.75
SYNE1-236ENST00000537750 CLPSL2Q6UWE3 100 aa10.36□□□□□ -0.75
SYNE1-236ENST00000537750 WFDC10AQ9H1F0 79 aa10.36□□□□□ -0.75
SYNE1-236ENST00000537750 TRAV25A0A0B4J276 109 aa10.36□□□□□ -0.75
SYNE1-236ENST00000537750 A0A1W2PRX2 142 aa10.36□□□□□ -0.75
SYNE1-236ENST00000537750 WIPF1O43516 503 aa10.36□□□□□ -0.75
SYNE1-236ENST00000537750 S100A7L2Q5SY68 101 aa10.36□□□□□ -0.75
SYNE1-236ENST00000537750 LINC00167Q96N53 147 aa10.36□□□□□ -0.75
SYNE1-236ENST00000537750 ACACBO00763 2458 aa10.36□□□□□ -0.75
SYNE1-236ENST00000537750 NBEAL2Q6ZNJ1 2754 aa10.35□□□□□ -0.75
SYNE1-236ENST00000537750 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-236ENST00000537750 TMEM86BQ8N661 226 aa10.35□□□□□ -0.75
SYNE1-236ENST00000537750 TMEM256-PLSCR3K7ERE1 68 aa10.35□□□□□ -0.75
SYNE1-236ENST00000537750 ABCA12Q86UK0 2595 aa10.34□□□□□ -0.75
SYNE1-236ENST00000537750 NDUFC2O95298 119 aa10.34□□□□□ -0.75
SYNE1-236ENST00000537750 LYPD5Q6UWN5 251 aa10.34□□□□□ -0.75
SYNE1-236ENST00000537750 UBL5Q9BZL1 73 aa10.34□□□□□ -0.75
SYNE1-236ENST00000537750 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
SYNE1-236ENST00000537750 FAM208BQ5VWN6 2430 aa10.34□□□□□ -0.75
SYNE1-236ENST00000537750 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
SYNE1-236ENST00000537750 M0R2N4 97 aa10.33□□□□□ -0.76
SYNE1-236ENST00000537750 ATP5EP2Q5VTU8 51 aa10.33□□□□□ -0.76
SYNE1-236ENST00000537750 J3QLI3 93 aa10.32□□□□□ -0.76
SYNE1-236ENST00000537750 PKD1L2Q7Z442 2459 aa10.32□□□□□ -0.76
SYNE1-236ENST00000537750 DSCR9P59020 149 aa10.31□□□□□ -0.76
SYNE1-236ENST00000537750 C6orf99Q4VX62 202 aa10.31□□□□□ -0.76
SYNE1-236ENST00000537750 C9orf116Q5BN46 136 aaPredicted RBP10.31□□□□□ -0.76
SYNE1-236ENST00000537750 APCP25054 2843 aa10.31□□□□□ -0.76
SYNE1-236ENST00000537750 CR1P17927 2039 aa10.3□□□□□ -0.76
SYNE1-236ENST00000537750 CACNA1AO00555 2505 aa10.3□□□□□ -0.76
SYNE1-236ENST00000537750 FAM236DA0A1B0GTK5 79 aa10.3□□□□□ -0.76
SYNE1-236ENST00000537750 FAM236CP0DP71 79 aa10.3□□□□□ -0.76
SYNE1-236ENST00000537750 Q8NDZ9 215 aa10.3□□□□□ -0.76
SYNE1-236ENST00000537750 NDUFC2-KCTD14E9PQ53 114 aa10.29□□□□□ -0.76
SYNE1-236ENST00000537750 C16orf74Q96GX8 76 aa10.29□□□□□ -0.76
SYNE1-236ENST00000537750 GCN1Q92616 2671 aaKnown RBP10.29□□□□□ -0.76
SYNE1-236ENST00000537750 FSHBP01225 129 aa10.29□□□□□ -0.76
SYNE1-236ENST00000537750 H7BZZ5 65 aa10.28□□□□□ -0.76
SYNE1-236ENST00000537750 A0A096LPF7 62 aa10.28□□□□□ -0.76
SYNE1-236ENST00000537750 TRAV10A0A0B4J240 114 aa10.28□□□□□ -0.76
SYNE1-236ENST00000537750 HAMPP81172 84 aa10.28□□□□□ -0.76
SYNE1-236ENST00000537750 SNURFQ9Y675 71 aa10.28□□□□□ -0.76
SYNE1-236ENST00000537750 Q8IZM0 81 aa10.28□□□□□ -0.76
SYNE1-236ENST00000537750 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
SYNE1-236ENST00000537750 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
SYNE1-236ENST00000537750 SPATA3Q8NHX4 192 aa10.27□□□□□ -0.77
SYNE1-236ENST00000537750 TRBV10-3A0A0K0K1G6 114 aa10.27□□□□□ -0.77
SYNE1-236ENST00000537750 Q6ZQT0 140 aa10.27□□□□□ -0.77
SYNE1-236ENST00000537750 RBM3P98179 157 aaKnown RBP10.26□□□□□ -0.77
SYNE1-236ENST00000537750 LAMTOR3Q9UHA4 124 aa10.26□□□□□ -0.77
SYNE1-236ENST00000537750 LINC01547P58512 204 aaPredicted RBP10.25□□□□□ -0.77
SYNE1-236ENST00000537750 ZNF469Q96JG9 3925 aaPredicted RBP10.25□□□□□ -0.77
SYNE1-236ENST00000537750 RMI2Q96E14 147 aa10.25□□□□□ -0.77
SYNE1-236ENST00000537750 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
SYNE1-236ENST00000537750 IGHV4-31P0DP07 118 aa10.24□□□□□ -0.77
SYNE1-236ENST00000537750 TRAV7A0A075B6U4 112 aa10.24□□□□□ -0.77
SYNE1-236ENST00000537750 CCL24O00175 119 aa10.24□□□□□ -0.77
SYNE1-236ENST00000537750 LINC00575Q6W349 94 aa10.24□□□□□ -0.77
SYNE1-236ENST00000537750 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
SYNE1-236ENST00000537750 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
SYNE1-236ENST00000537750 GYPEP15421 78 aa10.23□□□□□ -0.77
SYNE1-236ENST00000537750 CCDC168Q8NDH2 2452 aa10.23□□□□□ -0.77
SYNE1-236ENST00000537750 IGSF10Q6WRI0 2623 aa10.23□□□□□ -0.77
SYNE1-236ENST00000537750 Q6ZVQ6 151 aa10.23□□□□□ -0.77
SYNE1-236ENST00000537750 CSNK1G2-AS1Q8NCQ2 148 aa10.23□□□□□ -0.77
SYNE1-236ENST00000537750 Q8N3U1 123 aa10.22□□□□□ -0.77
SYNE1-236ENST00000537750 SERP1Q9Y6X1 66 aa10.22□□□□□ -0.77
SYNE1-236ENST00000537750 LINC00336Q6ZUF6 198 aa10.21□□□□□ -0.77
SYNE1-236ENST00000537750 ZNF843Q8N446 348 aa10.21□□□□□ -0.77
SYNE1-236ENST00000537750 SCXQ7RTU7 201 aa10.21□□□□□ -0.78
SYNE1-236ENST00000537750 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
SYNE1-236ENST00000537750 LINC00482Q8N8I6 264 aa10.2□□□□□ -0.78
SYNE1-236ENST00000537750 PIEZO1Q92508 2521 aa10.2□□□□□ -0.78
SYNE1-236ENST00000537750 F8WEM9 126 aa10.2□□□□□ -0.78
SYNE1-236ENST00000537750 ZNF561-AS1K7EIQ3 104 aa10.2□□□□□ -0.78
SYNE1-236ENST00000537750 KLKP1Q107X0 134 aa10.19□□□□□ -0.78
SYNE1-236ENST00000537750 Q6ZQY7 126 aa10.19□□□□□ -0.78
SYNE1-236ENST00000537750 C6orf223Q8N319 242 aa10.18□□□□□ -0.78
SYNE1-236ENST00000537750 LOC110117498A0A087WWA1 95 aa10.18□□□□□ -0.78
SYNE1-236ENST00000537750 A0A1B0GUV1 79 aa10.18□□□□□ -0.78
SYNE1-236ENST00000537750 C19orf73Q9NVV2 129 aa10.18□□□□□ -0.78
SYNE1-236ENST00000537750 C10orf25Q5T742 122 aa10.17□□□□□ -0.78
SYNE1-236ENST00000537750 CHCHD10Q8WYQ3 142 aaPredicted RBP10.17□□□□□ -0.78
SYNE1-236ENST00000537750 COX17Q14061 63 aa10.17□□□□□ -0.78
SYNE1-236ENST00000537750 LINC01006Q8NI28 216 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms