RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 IGHV3OR16-9A0A0B4J2B5 98 aa5.88□□□□□ -1.47
SRGAP1-202ENST00000537556 PRB1P04280 392 aa5.88□□□□□ -1.47
SRGAP1-202ENST00000537556 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
SRGAP1-202ENST00000537556 IGHV4-31P0DP07 118 aa5.88□□□□□ -1.47
SRGAP1-202ENST00000537556 CYP4F30PQ9H0H9 118 aa5.88□□□□□ -1.47
SRGAP1-202ENST00000537556 GPR179Q6PRD1 2367 aa5.88□□□□□ -1.47
SRGAP1-202ENST00000537556 CNOT1A5YKK6 2376 aaKnown RBP5.88□□□□□ -1.47
SRGAP1-202ENST00000537556 PTPRZ1P23471 2315 aaPredicted RBP5.88□□□□□ -1.47
SRGAP1-202ENST00000537556 DOPEY2Q9Y3R5 2298 aa5.87□□□□□ -1.47
SRGAP1-202ENST00000537556 ZNF73O43830 326 aaPredicted RBP5.87□□□□□ -1.47
SRGAP1-202ENST00000537556 SPTSSBQ8NFR3 76 aa5.87□□□□□ -1.47
SRGAP1-202ENST00000537556 CHKB-CPT1BH3BT56 60 aa5.87□□□□□ -1.47
SRGAP1-202ENST00000537556 Q5VV11 94 aa5.87□□□□□ -1.47
SRGAP1-202ENST00000537556 SPTBN1Q01082 2364 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-202ENST00000537556 PRR3P79522 188 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-202ENST00000537556 IGFL3Q6UXB1 125 aa5.86□□□□□ -1.47
SRGAP1-202ENST00000537556 Q6ZQY7 126 aa5.86□□□□□ -1.47
SRGAP1-202ENST00000537556 LIMD2Q9BT23 127 aa5.86□□□□□ -1.47
SRGAP1-202ENST00000537556 IGKV3OR2-268A0A0C4DH90 116 aa5.86□□□□□ -1.47
SRGAP1-202ENST00000537556 LCE6AA0A183 80 aa5.86□□□□□ -1.47
SRGAP1-202ENST00000537556 C16orf90A8MZG2 172 aa5.86□□□□□ -1.47
SRGAP1-202ENST00000537556 COX7BP24311 80 aa5.86□□□□□ -1.47
SRGAP1-202ENST00000537556 SORL1Q92673 2214 aa5.85□□□□□ -1.47
SRGAP1-202ENST00000537556 LINC01006Q8NI28 216 aa5.85□□□□□ -1.47
SRGAP1-202ENST00000537556 COX17Q14061 63 aa5.85□□□□□ -1.47
SRGAP1-202ENST00000537556 Q8N9L7 120 aa5.85□□□□□ -1.47
SRGAP1-202ENST00000537556 MAP1BP46821 2468 aaKnown RBP5.85□□□□□ -1.47
SRGAP1-202ENST00000537556 APC2O95996 2303 aa5.85□□□□□ -1.47
SRGAP1-202ENST00000537556 HCG22E2RYF7 251 aa5.85□□□□□ -1.47
SRGAP1-202ENST00000537556 LMO4P61968 165 aa5.85□□□□□ -1.47
SRGAP1-202ENST00000537556 DEFB114Q30KQ6 69 aa5.85□□□□□ -1.47
SRGAP1-202ENST00000537556 NDUFB1O75438 58 aa5.84□□□□□ -1.47
SRGAP1-202ENST00000537556 KMT2BQ9UMN6 2715 aaPredicted RBP5.84□□□□□ -1.47
SRGAP1-202ENST00000537556 A8MU10 97 aa5.84□□□□□ -1.48
SRGAP1-202ENST00000537556 PRM2P04554 102 aa5.84□□□□□ -1.48
SRGAP1-202ENST00000537556 ZFP36P26651 326 aaKnown RBP5.84□□□□□ -1.48
SRGAP1-202ENST00000537556 GRNP28799 593 aaKnown RBP5.84□□□□□ -1.48
SRGAP1-202ENST00000537556 Q8IZM0 81 aa5.84□□□□□ -1.48
SRGAP1-202ENST00000537556 DEFB109BQ30KR1 87 aa5.83□□□□□ -1.48
SRGAP1-202ENST00000537556 C7orf65Q6ZTY9 151 aa5.83□□□□□ -1.48
SRGAP1-202ENST00000537556 C19orf84I3L1E1 186 aa5.83□□□□□ -1.48
SRGAP1-202ENST00000537556 FAM30AQ9NZY2 134 aa5.83□□□□□ -1.48
SRGAP1-202ENST00000537556 C8orf87E5RJ46 101 aa5.82□□□□□ -1.48
SRGAP1-202ENST00000537556 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-202ENST00000537556 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-202ENST00000537556 DIRC1Q969H9 104 aa5.82□□□□□ -1.48
SRGAP1-202ENST00000537556 A6NN06 94 aa5.82□□□□□ -1.48
SRGAP1-202ENST00000537556 DEFB124Q8NES8 71 aa5.82□□□□□ -1.48
SRGAP1-202ENST00000537556 A8MTW9 85 aa5.82□□□□□ -1.48
SRGAP1-202ENST00000537556 IGLV1-40P01703 118 aa5.82□□□□□ -1.48
SRGAP1-202ENST00000537556 LCA10Q71F78 164 aa5.82□□□□□ -1.48
SRGAP1-202ENST00000537556 HIGD2BQ4VC39 106 aa5.81□□□□□ -1.48
SRGAP1-202ENST00000537556 PIEZO2Q9H5I5 2752 aa5.81□□□□□ -1.48
SRGAP1-202ENST00000537556 TRGV1A0A0A0MS02 117 aa5.81□□□□□ -1.48
SRGAP1-202ENST00000537556 PLA2G2AP14555 144 aa5.81□□□□□ -1.48
SRGAP1-202ENST00000537556 IGLV4-60A0A075B6I1 120 aa5.8□□□□□ -1.48
SRGAP1-202ENST00000537556 TRGV2A0A075B6R0 118 aa5.8□□□□□ -1.48
SRGAP1-202ENST00000537556 H3BS24 57 aa5.8□□□□□ -1.48
SRGAP1-202ENST00000537556 SMIM29Q86T20 159 aa5.8□□□□□ -1.48
SRGAP1-202ENST00000537556 INSP01308 110 aa5.8□□□□□ -1.48
SRGAP1-202ENST00000537556 DEFB131AP59861 70 aa5.8□□□□□ -1.48
SRGAP1-202ENST00000537556 CELA1Q9UNI1 258 aa5.8□□□□□ -1.48
SRGAP1-202ENST00000537556 LOC400499M0QZD8 3231 aa5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 ETDCA0A1B0GVM5 59 aa5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 ELOF1P60002 83 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 CCL24O00175 119 aa5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 ADGRG4Q8IZF6 3080 aa5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 IGHV4-30-2A0A087WSY4 118 aa5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 LINC00959A0A1B0GUT2 108 aa5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 A6NED7 52 aa5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
SRGAP1-202ENST00000537556 NCOR2Q9Y618 2525 aa5.78□□□□□ -1.48
SRGAP1-202ENST00000537556 B9D2Q9BPU9 175 aa5.78□□□□□ -1.48
SRGAP1-202ENST00000537556 ESM1Q9NQ30 184 aa5.78□□□□□ -1.48
SRGAP1-202ENST00000537556 ASPMQ8IZT6 3477 aa5.77□□□□□ -1.49
SRGAP1-202ENST00000537556 PRR4Q16378 134 aa5.77□□□□□ -1.49
SRGAP1-202ENST00000537556 Q75L30 129 aa5.77□□□□□ -1.49
SRGAP1-202ENST00000537556 LINC00612Q8N6U2 182 aa5.77□□□□□ -1.49
SRGAP1-202ENST00000537556 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.77□□□□□ -1.49
SRGAP1-202ENST00000537556 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
SRGAP1-202ENST00000537556 CDC42SE1Q9NRR8 79 aa5.76□□□□□ -1.49
SRGAP1-202ENST00000537556 COL6A6A6NMZ7 2263 aa5.76□□□□□ -1.49
SRGAP1-202ENST00000537556 IGHV4-28A0A0C4DH34 117 aa5.76□□□□□ -1.49
SRGAP1-202ENST00000537556 NKAPP1Q8N9T2 125 aa5.76□□□□□ -1.49
SRGAP1-202ENST00000537556 LY6EQ16553 131 aa5.76□□□□□ -1.49
SRGAP1-202ENST00000537556 USP24Q9UPU5 2620 aa5.75□□□□□ -1.49
SRGAP1-202ENST00000537556 TRGV4A0A0C4DH28 118 aa5.75□□□□□ -1.49
SRGAP1-202ENST00000537556 ACACBO00763 2458 aa5.75□□□□□ -1.49
SRGAP1-202ENST00000537556 A0A1B0GW54 56 aa5.75□□□□□ -1.49
SRGAP1-202ENST00000537556 LINC00208Q96KT6 92 aa5.75□□□□□ -1.49
SRGAP1-202ENST00000537556 VPREB1P12018 145 aa5.74□□□□□ -1.49
SRGAP1-202ENST00000537556 C10orf25Q5T742 122 aa5.74□□□□□ -1.49
SRGAP1-202ENST00000537556 AKAP6Q13023 2319 aa5.74□□□□□ -1.49
SRGAP1-202ENST00000537556 LOC101927531A0A1B0GV80 90 aa5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 PRB2P02812 416 aaPredicted RBP5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 IGHV4-30-4P0DP06 118 aa5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 Q9BRP9 147 aa5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 KLK12Q9UKR0 248 aa5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 BOD1L1Q8NFC6 3051 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms