RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 Q8IZM0 81 aa10.82□□□□□ -0.68
GPN3-202ENST00000537466 PACRGQ96M98 296 aaPredicted RBP10.82□□□□□ -0.68
GPN3-202ENST00000537466 LRP1Q07954 4544 aaKnown RBP10.81□□□□□ -0.68
GPN3-202ENST00000537466 IGLV5-45A0A087WSX0 123 aa10.81□□□□□ -0.68
GPN3-202ENST00000537466 TRBV30A0A0K0K1B3 111 aa10.81□□□□□ -0.68
GPN3-202ENST00000537466 C9orf116Q5BN46 136 aaPredicted RBP10.81□□□□□ -0.68
GPN3-202ENST00000537466 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
GPN3-202ENST00000537466 C6orf226Q5I0X4 101 aa10.81□□□□□ -0.68
GPN3-202ENST00000537466 TRGC2P03986 189 aa10.8□□□□□ -0.68
GPN3-202ENST00000537466 NDUFA6P56556 154 aa10.8□□□□□ -0.68
GPN3-202ENST00000537466 CKS1BP61024 79 aa10.8□□□□□ -0.68
GPN3-202ENST00000537466 FAT3Q8TDW7 4589 aa10.79□□□□□ -0.68
GPN3-202ENST00000537466 DMBT1Q9UGM3 2413 aaPredicted RBP10.79□□□□□ -0.68
GPN3-202ENST00000537466 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
GPN3-202ENST00000537466 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
GPN3-202ENST00000537466 FAM168BA1KXE4 195 aa10.78□□□□□ -0.68
GPN3-202ENST00000537466 KRTAP29-1A8MX34 341 aaPredicted RBP10.78□□□□□ -0.68
GPN3-202ENST00000537466 SPINK8P0C7L1 97 aa10.78□□□□□ -0.68
GPN3-202ENST00000537466 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
GPN3-202ENST00000537466 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
GPN3-202ENST00000537466 CHCHD1Q96BP2 118 aaKnown RBP10.78□□□□□ -0.68
GPN3-202ENST00000537466 HERC1Q15751 4861 aa10.78□□□□□ -0.68
GPN3-202ENST00000537466 COLCA2A8K830 154 aa10.76□□□□□ -0.69
GPN3-202ENST00000537466 NDUFC2-KCTD14E9PQ53 114 aa10.76□□□□□ -0.69
GPN3-202ENST00000537466 ATP5LO75964 103 aa10.76□□□□□ -0.69
GPN3-202ENST00000537466 J3QL48 77 aa10.75□□□□□ -0.69
GPN3-202ENST00000537466 ATP6V1G1O75348 118 aa10.75□□□□□ -0.69
GPN3-202ENST00000537466 PHF5AQ7RTV0 110 aaKnown RBP10.75□□□□□ -0.69
GPN3-202ENST00000537466 COX7B2Q8TF08 81 aa10.75□□□□□ -0.69
GPN3-202ENST00000537466 F8VRH5 84 aa10.74□□□□□ -0.69
GPN3-202ENST00000537466 BAGE3Q86Y29 109 aa10.74□□□□□ -0.69
GPN3-202ENST00000537466 ZNF22P17026 224 aaPredicted RBP10.74□□□□□ -0.69
GPN3-202ENST00000537466 S100A1P23297 94 aa10.74□□□□□ -0.69
GPN3-202ENST00000537466 C9orf129Q5T035 196 aaKnown RBP10.74□□□□□ -0.69
GPN3-202ENST00000537466 FAM19A5Q7Z5A7 132 aaPredicted RBP10.74□□□□□ -0.69
GPN3-202ENST00000537466 KRTAP7-1Q8IUC3 87 aa10.74□□□□□ -0.69
GPN3-202ENST00000537466 H3BRM9 83 aa10.73□□□□□ -0.69
GPN3-202ENST00000537466 CXCL5P42830 114 aa10.73□□□□□ -0.69
GPN3-202ENST00000537466 FAM19A2Q8N3H0 131 aa10.73□□□□□ -0.69
GPN3-202ENST00000537466 C11orf86A6NJI1 115 aa10.72□□□□□ -0.69
GPN3-202ENST00000537466 LINC00310P59036 64 aa10.72□□□□□ -0.69
GPN3-202ENST00000537466 HSBP1O75506 76 aa10.71□□□□□ -0.69
GPN3-202ENST00000537466 SCO1O75880 301 aa10.71□□□□□ -0.69
GPN3-202ENST00000537466 OXTP01178 125 aa10.71□□□□□ -0.69
GPN3-202ENST00000537466 IFI27L1Q96BM0 104 aa10.71□□□□□ -0.69
GPN3-202ENST00000537466 IGLV5-39A0A0G2JS06 123 aa10.7□□□□□ -0.7
GPN3-202ENST00000537466 SERF1AO75920 110 aa10.69□□□□□ -0.7
GPN3-202ENST00000537466 PSORS1C2Q9UIG4 136 aa10.69□□□□□ -0.7
GPN3-202ENST00000537466 CHTOPQ9Y3Y2 248 aaKnown RBP10.69□□□□□ -0.7
GPN3-202ENST00000537466 KRTAP11-1Q8IUC1 163 aa10.68□□□□□ -0.7
GPN3-202ENST00000537466 XAGE1AQ9HD64 81 aa10.68□□□□□ -0.7
GPN3-202ENST00000537466 TRAV12-1A0A0B4J245 112 aa10.68□□□□□ -0.7
GPN3-202ENST00000537466 NUPR1O60356 82 aa10.68□□□□□ -0.7
GPN3-202ENST00000537466 TMEM170BQ5T4T1 132 aa10.68□□□□□ -0.7
GPN3-202ENST00000537466 M0QXV9 152 aa10.67□□□□□ -0.7
GPN3-202ENST00000537466 SERTAD4-AS1Q5TG53 156 aa10.66□□□□□ -0.7
GPN3-202ENST00000537466 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
GPN3-202ENST00000537466 C1orf137Q5JT78 98 aa10.64□□□□□ -0.71
GPN3-202ENST00000537466 SPINK6Q6UWN8 80 aa10.64□□□□□ -0.71
GPN3-202ENST00000537466 H0Y8G0 127 aa10.62□□□□□ -0.71
GPN3-202ENST00000537466 LEPROTL1O95214 131 aa10.62□□□□□ -0.71
GPN3-202ENST00000537466 TMEM223A0PJW6 202 aa10.61□□□□□ -0.71
GPN3-202ENST00000537466 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
GPN3-202ENST00000537466 C22orf24Q9Y442 160 aa10.61□□□□□ -0.71
GPN3-202ENST00000537466 PFN2P35080 140 aa10.61□□□□□ -0.71
GPN3-202ENST00000537466 UBE2BP63146 152 aa10.61□□□□□ -0.71
GPN3-202ENST00000537466 ODF1Q14990 250 aa10.61□□□□□ -0.71
GPN3-202ENST00000537466 FABP4P15090 132 aa10.6□□□□□ -0.71
GPN3-202ENST00000537466 ZNF625Q96I27 306 aaPredicted RBP10.6□□□□□ -0.71
GPN3-202ENST00000537466 HIST1H2BKO60814 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 IGLV7-43P04211 117 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST1H2BJP06899 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST1H2BOP23527 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST1H2BBP33778 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST1H2BDP58876 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST1H2BCP62807 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST2H2BEQ16778 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST1H2BHQ93079 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST1H2BNQ99877 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HIST1H2BMQ99879 126 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 ERG28Q9UKR5 140 aa10.58□□□□□ -0.72
GPN3-202ENST00000537466 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
GPN3-202ENST00000537466 LINC01600Q96MT4 127 aa10.56□□□□□ -0.72
GPN3-202ENST00000537466 PLA2G2DQ9UNK4 145 aa10.56□□□□□ -0.72
GPN3-202ENST00000537466 TNXBP22105 4242 aa10.56□□□□□ -0.72
GPN3-202ENST00000537466 MRPL55Q7Z7F7 128 aaKnown RBP10.55□□□□□ -0.72
GPN3-202ENST00000537466 TP73-AS1Q9UF72 201 aa10.55□□□□□ -0.72
GPN3-202ENST00000537466 SFTA2Q6UW10 78 aa10.55□□□□□ -0.72
GPN3-202ENST00000537466 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
GPN3-202ENST00000537466 PMCHL2Q9BQD1 86 aa10.55□□□□□ -0.72
GPN3-202ENST00000537466 COX17Q14061 63 aa10.54□□□□□ -0.72
GPN3-202ENST00000537466 LBHQ53QV2 105 aaPredicted RBP10.54□□□□□ -0.72
GPN3-202ENST00000537466 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
GPN3-202ENST00000537466 LINC00167Q96N53 147 aa10.53□□□□□ -0.72
GPN3-202ENST00000537466 IGLV5-37A0A075B6J1 123 aa10.52□□□□□ -0.73
GPN3-202ENST00000537466 GAGE10A6NGK3 116 aa10.51□□□□□ -0.73
GPN3-202ENST00000537466 RPL37AP8A6NKH3 93 aa10.51□□□□□ -0.73
GPN3-202ENST00000537466 PLNP26678 52 aa10.51□□□□□ -0.73
GPN3-202ENST00000537466 A0A0U1RRA0 63 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms