RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 RHEBQ15382 184 aa8.46□□□□□ -1.06
LPCAT3-206ENST00000537179 CENPWQ5EE01 88 aa8.46□□□□□ -1.06
LPCAT3-206ENST00000537179 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.06
LPCAT3-206ENST00000537179 HIST3H2BBQ8N257 126 aa8.46□□□□□ -1.06
LPCAT3-206ENST00000537179 SMIM12Q96EX1 92 aa8.46□□□□□ -1.06
LPCAT3-206ENST00000537179 CYTL1Q9NRR1 136 aa8.46□□□□□ -1.06
LPCAT3-206ENST00000537179 SYNE2Q8WXH0 6885 aaKnown RBP8.45□□□□□ -1.06
LPCAT3-206ENST00000537179 KANTRA0A1W2PQU2 76 aa8.45□□□□□ -1.06
LPCAT3-206ENST00000537179 PPP1R2P9O14990 202 aa8.45□□□□□ -1.06
LPCAT3-206ENST00000537179 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
LPCAT3-206ENST00000537179 PRO1933Q9H354 126 aa8.45□□□□□ -1.06
LPCAT3-206ENST00000537179 ST20Q9HBF5 79 aa8.45□□□□□ -1.06
LPCAT3-206ENST00000537179 MACF1Q9UPN3 7388 aaKnown RBP8.44□□□□□ -1.06
LPCAT3-206ENST00000537179 BORCS7-ASMTA0A0B4J1R7 106 aa8.44□□□□□ -1.06
LPCAT3-206ENST00000537179 M0R2T5 61 aa8.44□□□□□ -1.06
LPCAT3-206ENST00000537179 SCGB1A1P11684 91 aa8.44□□□□□ -1.06
LPCAT3-206ENST00000537179 C2orf82Q6UX34 121 aa8.44□□□□□ -1.06
LPCAT3-206ENST00000537179 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
LPCAT3-206ENST00000537179 TRBV27A0A0K0K1C4 114 aa8.43□□□□□ -1.06
LPCAT3-206ENST00000537179 A0A1B0GV50 99 aa8.43□□□□□ -1.06
LPCAT3-206ENST00000537179 POLR2KP53803 58 aaKnown RBP8.43□□□□□ -1.06
LPCAT3-206ENST00000537179 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
LPCAT3-206ENST00000537179 MRPL55Q7Z7F7 128 aaKnown RBP8.43□□□□□ -1.06
LPCAT3-206ENST00000537179 PACRGQ96M98 296 aaPredicted RBP8.43□□□□□ -1.06
LPCAT3-206ENST00000537179 YPEL4Q96NS1 127 aa8.43□□□□□ -1.06
LPCAT3-206ENST00000537179 C20orf202A1L168 122 aa8.42□□□□□ -1.06
LPCAT3-206ENST00000537179 XP32Q5T750 250 aa8.42□□□□□ -1.06
LPCAT3-206ENST00000537179 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
LPCAT3-206ENST00000537179 TP73-AS1Q9UF72 201 aa8.42□□□□□ -1.06
LPCAT3-206ENST00000537179 H0Y8G0 127 aa8.41□□□□□ -1.06
LPCAT3-206ENST00000537179 TNFRSF6BO95407 300 aa8.41□□□□□ -1.06
LPCAT3-206ENST00000537179 NDUFA6P56556 154 aa8.41□□□□□ -1.06
LPCAT3-206ENST00000537179 SMAGPQ0VAQ4 97 aa8.41□□□□□ -1.06
LPCAT3-206ENST00000537179 COL5A1-AS1Q5SY13 56 aa8.41□□□□□ -1.06
LPCAT3-206ENST00000537179 XAGE1AQ9HD64 81 aa8.41□□□□□ -1.06
LPCAT3-206ENST00000537179 FXYD6-FXYD2A0A087WZ82 144 aa8.4□□□□□ -1.06
LPCAT3-206ENST00000537179 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
LPCAT3-206ENST00000537179 UBE2AP49459 152 aa8.4□□□□□ -1.06
LPCAT3-206ENST00000537179 LINC01551Q86U37 167 aa8.4□□□□□ -1.06
LPCAT3-206ENST00000537179 C11orf52Q96A22 123 aa8.4□□□□□ -1.06
LPCAT3-206ENST00000537179 COA6Q5JTJ3 125 aaKnown RBP8.39□□□□□ -1.07
LPCAT3-206ENST00000537179 RPS10P5Q9NQ39 176 aa8.39□□□□□ -1.07
LPCAT3-206ENST00000537179 ZNF727A8MUV8 499 aa8.38□□□□□ -1.07
LPCAT3-206ENST00000537179 FCER1GP30273 86 aa8.38□□□□□ -1.07
LPCAT3-206ENST00000537179 TIMM21Q9BVV7 248 aa8.38□□□□□ -1.07
LPCAT3-206ENST00000537179 GNG4P50150 75 aa8.37□□□□□ -1.07
LPCAT3-206ENST00000537179 UBE2V1Q13404 147 aa8.37□□□□□ -1.07
LPCAT3-206ENST00000537179 DAND5Q8N907 189 aa8.37□□□□□ -1.07
LPCAT3-206ENST00000537179 FAM104AQ969W3 186 aa8.37□□□□□ -1.07
LPCAT3-206ENST00000537179 LINC00167Q96N53 147 aa8.37□□□□□ -1.07
LPCAT3-206ENST00000537179 ALKBH7Q9BT30 221 aaPredicted RBP8.37□□□□□ -1.07
LPCAT3-206ENST00000537179 TAGLN2P37802 199 aaKnown RBP8.36□□□□□ -1.07
LPCAT3-206ENST00000537179 MBD3L1Q8WWY6 194 aa8.36□□□□□ -1.07
LPCAT3-206ENST00000537179 TRBV20OR9-2A0A075B6H5 130 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BKO60814 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BJP06899 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BOP23527 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BBP33778 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BDP58876 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BCP62807 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST2H2BEQ16778 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 PET117Q6UWS5 81 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BHQ93079 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BNQ99877 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BMQ99879 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 HIST1H2BLQ99880 126 aa8.35□□□□□ -1.07
LPCAT3-206ENST00000537179 CCL20P78556 96 aa8.34□□□□□ -1.07
LPCAT3-206ENST00000537179 FAM213BQ8TBF2 198 aa8.34□□□□□ -1.07
LPCAT3-206ENST00000537179 VPS25Q9BRG1 176 aa8.34□□□□□ -1.07
LPCAT3-206ENST00000537179 MIEN1Q9BRT3 115 aa8.34□□□□□ -1.07
LPCAT3-206ENST00000537179 TGIF2-C20orf24A0A0A6YYL0 155 aa8.33□□□□□ -1.08
LPCAT3-206ENST00000537179 A0A1B0GV72 72 aa8.33□□□□□ -1.08
LPCAT3-206ENST00000537179 GAGE10A6NGK3 116 aa8.33□□□□□ -1.08
LPCAT3-206ENST00000537179 K7ERU9 68 aa8.33□□□□□ -1.08
LPCAT3-206ENST00000537179 FABP4P15090 132 aa8.33□□□□□ -1.08
LPCAT3-206ENST00000537179 IGLV8-61A0A075B6I0 122 aa8.32□□□□□ -1.08
LPCAT3-206ENST00000537179 VCYO14598 125 aa8.32□□□□□ -1.08
LPCAT3-206ENST00000537179 PRLHP81277 87 aa8.32□□□□□ -1.08
LPCAT3-206ENST00000537179 PNRC1Q12796 327 aaPredicted RBP8.32□□□□□ -1.08
LPCAT3-206ENST00000537179 RPL39P62891 51 aaKnown RBP8.31□□□□□ -1.08
LPCAT3-206ENST00000537179 MTURNQ8N3F0 131 aa8.31□□□□□ -1.08
LPCAT3-206ENST00000537179 TMEM18Q96B42 140 aa8.31□□□□□ -1.08
LPCAT3-206ENST00000537179 HBBP68871 147 aa8.3□□□□□ -1.08
LPCAT3-206ENST00000537179 PCOTHQ58A44 107 aa8.3□□□□□ -1.08
LPCAT3-206ENST00000537179 SMKR1H3BMG3 65 aa8.29□□□□□ -1.08
LPCAT3-206ENST00000537179 RPL32P62910 135 aaKnown RBP8.29□□□□□ -1.08
LPCAT3-206ENST00000537179 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
LPCAT3-206ENST00000537179 Q8NBF4 154 aa8.29□□□□□ -1.08
LPCAT3-206ENST00000537179 KIR2DL4Q99706 377 aa8.29□□□□□ -1.08
LPCAT3-206ENST00000537179 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
LPCAT3-206ENST00000537179 SUMO2P61956 95 aaKnown RBP8.28□□□□□ -1.08
LPCAT3-206ENST00000537179 PLEKHB2Q96CS7 222 aa8.28□□□□□ -1.08
LPCAT3-206ENST00000537179 MANBALQ9NQG1 85 aa8.28□□□□□ -1.08
LPCAT3-206ENST00000537179 KRTAP4-16G5E9R7 235 aaPredicted RBP8.27□□□□□ -1.09
LPCAT3-206ENST00000537179 MRPS36P82909 103 aaKnown RBP8.27□□□□□ -1.09
LPCAT3-206ENST00000537179 NRACQ8N912 160 aa8.27□□□□□ -1.09
LPCAT3-206ENST00000537179 GNG13Q9P2W3 67 aa8.27□□□□□ -1.09
LPCAT3-206ENST00000537179 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
LPCAT3-206ENST00000537179 TMEM191AQ9H0A3 160 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms