RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ST20Q9HBF5 79 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 SPANXCQ9NY87 97 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 PSENENQ9NZ42 101 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 MUC21A0A0G2JKD1 596 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 A6NDN8 102 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 FNDC10F2Z333 226 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 HLA-DQA1P01909 254 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 SEC11AP67812 179 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 TMEM97Q5BJF2 176 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 ENHOQ6UWT2 76 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 CYB561D1Q8N8Q1 229 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 OR13C6PQ8NH95 151 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 CMTM2Q8TAZ6 248 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 C2orf50Q96LR7 162 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 SAMD10Q9BYL1 202 aa3.04□□□□□ -1.92
CLIP1-207ENST00000536634 H3BRM9 83 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 MGST1P10620 155 aaKnown RBP3.03□□□□□ -1.92
CLIP1-207ENST00000536634 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
CLIP1-207ENST00000536634 PDE6HQ13956 83 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 ADIRFQ15847 76 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 RPL7L1Q6DKI1 246 aaKnown RBP3.03□□□□□ -1.92
CLIP1-207ENST00000536634 KRTAP26-1Q6PEX3 210 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 OR2G3Q8NGZ4 309 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 SMIM3Q9BZL3 60 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 SPANXB1Q9NS25 103 aaPredicted RBP3.03□□□□□ -1.92
CLIP1-207ENST00000536634 PLAC8Q9NZF1 115 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 TMEM14CQ9P0S9 112 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 TIMM9Q9Y5J7 89 aa3.03□□□□□ -1.92
CLIP1-207ENST00000536634 C17orf112F2Z3M2 114 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 TMEM250H0YL14 139 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 J3KT08 172 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 NUPR1O60356 82 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 SPINK8P0C7L1 97 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 CNBPP62633 177 aaKnown RBP3.02□□□□□ -1.93
CLIP1-207ENST00000536634 Q0VG73 95 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 IL15RAQ13261 267 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 PPP1R1AQ13522 171 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 MPV17L2Q567V2 206 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 C6orf226Q5I0X4 101 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 Q6Q795 121 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 SPINK6Q6UWN8 80 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 OR1L4Q8NGR5 311 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 DPH3Q96FX2 82 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 RNF185Q96GF1 192 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 FAM167A-AS1Q96KT0 104 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 SCGB3A2Q96PL1 93 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 SLC25A2Q9BXI2 301 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 MANBALQ9NQG1 85 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 SLC39A9Q9NUM3 307 aa3.02□□□□□ -1.93
CLIP1-207ENST00000536634 IGHV3-64A0A075B6Q5 118 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 MUC21A0A140T8X8 626 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 F8W1H4 67 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 H7C1H1 209 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 PMCHP20382 165 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 CLPSL2Q6UWE3 100 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 ZFP2Q6ZN57 461 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 Q6ZUT4 128 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 TMEM75Q8N9X5 138 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 CHCHD10Q8WYQ3 142 aaPredicted RBP3.01□□□□□ -1.93
CLIP1-207ENST00000536634 FXYD5Q96DB9 178 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 PGLYRP4Q96LB8 373 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 PMCHL2Q9BQD1 86 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 CHCHD7Q9BUK0 85 aa3.01□□□□□ -1.93
CLIP1-207ENST00000536634 TRAV9-1A0A075B6T8 112 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 TRAV1-1A0A0B4J248 108 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 TRAV21A0A0B4J279 112 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 PIGBOS1A0A0B4J2F0 54 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 UBE2L5PA0A1B0GUS4 154 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 A0A1W2PPM0 123 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 RBAKDNA6NC62 111 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 FAM24AA6NFZ4 105 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 CRPP02741 224 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 RNASE3P12724 160 aaKnown RBP3□□□□□ -1.93
CLIP1-207ENST00000536634 KCNIP4Q6PIL6 250 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 MIR17HGQ75NE6 70 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 FAM19A5Q7Z5A7 132 aaPredicted RBP3□□□□□ -1.93
CLIP1-207ENST00000536634 OR10AG1Q8NH19 301 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 C18orf32Q8TCD1 76 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 AP1S3Q96PC3 154 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 PRO0628Q9UI54 55 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 SPCS1Q9Y6A9 102 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 V9GYY9 64 aa3□□□□□ -1.93
CLIP1-207ENST00000536634 IGKV2-24A0A0C4DH68 120 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 TINCRA0A1B0GVN0 87 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 PGPA6NDG6 321 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 TMEM262E9PQX1 116 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 KRTAP4-16G5E9R7 235 aaPredicted RBP2.99□□□□□ -1.93
CLIP1-207ENST00000536634 CCDC179H3BU77 68 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 CST7O76096 145 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 ANGP03950 147 aaKnown RBP2.99□□□□□ -1.93
CLIP1-207ENST00000536634 C3orf79P0CE67 100 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 RPL12P30050 165 aaKnown RBP2.99□□□□□ -1.93
CLIP1-207ENST00000536634 ZNF80P51504 273 aaPredicted RBP2.99□□□□□ -1.93
CLIP1-207ENST00000536634 KRTDAPP60985 99 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 COX6A2Q02221 97 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 SLC25A34Q6PIV7 304 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 ATP5SQ99766 215 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 SH3BGRL3Q9H299 93 aa2.99□□□□□ -1.93
CLIP1-207ENST00000536634 MAP1LC3AQ9H492 121 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms