RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ORAOV1Q8WV07 137 aa11.47□□□□□ -0.57
CCDC61-201ENST00000536603 MAP1LC3CQ9BXW4 147 aa11.47□□□□□ -0.57
CCDC61-201ENST00000536603 MRPL35Q9NZE8 188 aaKnown RBP11.47□□□□□ -0.57
CCDC61-201ENST00000536603 CHTOPQ9Y3Y2 248 aaKnown RBP11.47□□□□□ -0.57
CCDC61-201ENST00000536603 A0A087WZ39 114 aa11.46□□□□□ -0.57
CCDC61-201ENST00000536603 CHTF8P0CG12 524 aa11.46□□□□□ -0.57
CCDC61-201ENST00000536603 IGLC3P0DOY3 106 aa11.46□□□□□ -0.57
CCDC61-201ENST00000536603 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.57
CCDC61-201ENST00000536603 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.57
CCDC61-201ENST00000536603 PMCHL2Q9BQD1 86 aa11.46□□□□□ -0.57
CCDC61-201ENST00000536603 TINCRA0A1B0GVN0 87 aa11.45□□□□□ -0.58
CCDC61-201ENST00000536603 KRTDAPP60985 99 aa11.45□□□□□ -0.58
CCDC61-201ENST00000536603 Q6ZRU5 148 aa11.45□□□□□ -0.58
CCDC61-201ENST00000536603 C2orf48Q96LS8 159 aa11.45□□□□□ -0.58
CCDC61-201ENST00000536603 C11orf86A6NJI1 115 aa11.44□□□□□ -0.58
CCDC61-201ENST00000536603 CIRBPQ14011 172 aaKnown RBP11.44□□□□□ -0.58
CCDC61-201ENST00000536603 CDKN2A-AS1Q9UH64 79 aa11.44□□□□□ -0.58
CCDC61-201ENST00000536603 IGKV2-24A0A0C4DH68 120 aa11.43□□□□□ -0.58
CCDC61-201ENST00000536603 F8VRH5 84 aa11.43□□□□□ -0.58
CCDC61-201ENST00000536603 HERVK_113P63121 156 aa11.43□□□□□ -0.58
CCDC61-201ENST00000536603 PLA2G2DQ9UNK4 145 aa11.43□□□□□ -0.58
CCDC61-201ENST00000536603 IGLV5-45A0A087WSX0 123 aa11.42□□□□□ -0.58
CCDC61-201ENST00000536603 OXTP01178 125 aa11.42□□□□□ -0.58
CCDC61-201ENST00000536603 ZNF22P17026 224 aaPredicted RBP11.42□□□□□ -0.58
CCDC61-201ENST00000536603 SEC11AP67812 179 aa11.42□□□□□ -0.58
CCDC61-201ENST00000536603 LINC01545Q5VT33 79 aa11.42□□□□□ -0.58
CCDC61-201ENST00000536603 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
CCDC61-201ENST00000536603 SPACA4Q8TDM5 124 aa11.42□□□□□ -0.58
CCDC61-201ENST00000536603 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
CCDC61-201ENST00000536603 A0A096LNI7 61 aa11.41□□□□□ -0.58
CCDC61-201ENST00000536603 LINC00469Q8N7U9 141 aa11.41□□□□□ -0.58
CCDC61-201ENST00000536603 A0A087WYN8 130 aa11.4□□□□□ -0.58
CCDC61-201ENST00000536603 MAJINQ3KP22 176 aa11.4□□□□□ -0.58
CCDC61-201ENST00000536603 LINC01561Q8N1V8 128 aa11.4□□□□□ -0.58
CCDC61-201ENST00000536603 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.58
CCDC61-201ENST00000536603 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
CCDC61-201ENST00000536603 F8WDY8 70 aa11.38□□□□□ -0.59
CCDC61-201ENST00000536603 NDUFA1O15239 70 aa11.38□□□□□ -0.59
CCDC61-201ENST00000536603 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
CCDC61-201ENST00000536603 DPM2O94777 84 aa11.37□□□□□ -0.59
CCDC61-201ENST00000536603 SPINK8P0C7L1 97 aa11.37□□□□□ -0.59
CCDC61-201ENST00000536603 GAGE2BQ13066 116 aa11.37□□□□□ -0.59
CCDC61-201ENST00000536603 C10orf25Q5T742 122 aa11.37□□□□□ -0.59
CCDC61-201ENST00000536603 UNQ6190/PRO20217Q6UXQ8 127 aa11.37□□□□□ -0.59
CCDC61-201ENST00000536603 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
CCDC61-201ENST00000536603 IGKCP01834 107 aa11.36□□□□□ -0.59
CCDC61-201ENST00000536603 KRTAP10-4P60372 401 aaPredicted RBP11.36□□□□□ -0.59
CCDC61-201ENST00000536603 RNF151Q2KHN1 245 aa11.36□□□□□ -0.59
CCDC61-201ENST00000536603 TMEM170BQ5T4T1 132 aa11.36□□□□□ -0.59
CCDC61-201ENST00000536603 STPG4Q8N801 248 aa11.36□□□□□ -0.59
CCDC61-201ENST00000536603 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
CCDC61-201ENST00000536603 LINC00474Q9P2X8 69 aa11.36□□□□□ -0.59
CCDC61-201ENST00000536603 PTTG1IPP53801 180 aa11.35□□□□□ -0.59
CCDC61-201ENST00000536603 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
CCDC61-201ENST00000536603 PLAC8Q9NZF1 115 aa11.35□□□□□ -0.59
CCDC61-201ENST00000536603 PRSS2P07478 247 aa11.34□□□□□ -0.59
CCDC61-201ENST00000536603 PLNP26678 52 aa11.34□□□□□ -0.59
CCDC61-201ENST00000536603 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
CCDC61-201ENST00000536603 C6orf48Q9UBA6 75 aa11.34□□□□□ -0.59
CCDC61-201ENST00000536603 IGLV5-39A0A0G2JS06 123 aa11.33□□□□□ -0.6
CCDC61-201ENST00000536603 TMEM223A0PJW6 202 aa11.33□□□□□ -0.6
CCDC61-201ENST00000536603 RPL37AP61513 92 aaKnown RBP11.33□□□□□ -0.6
CCDC61-201ENST00000536603 C6orf226Q5I0X4 101 aa11.33□□□□□ -0.6
CCDC61-201ENST00000536603 ATOH7Q8N100 152 aa11.33□□□□□ -0.6
CCDC61-201ENST00000536603 H3BRM9 83 aa11.32□□□□□ -0.6
CCDC61-201ENST00000536603 Q8IZM0 81 aa11.32□□□□□ -0.6
CCDC61-201ENST00000536603 C20orf202A1L168 122 aa11.31□□□□□ -0.6
CCDC61-201ENST00000536603 CKS1BP61024 79 aa11.31□□□□□ -0.6
CCDC61-201ENST00000536603 HMCN2Q8NDA2 5059 aa11.31□□□□□ -0.6
CCDC61-201ENST00000536603 LRP1Q07954 4544 aaKnown RBP11.3□□□□□ -0.6
CCDC61-201ENST00000536603 TRBV30A0A0K0K1B3 111 aa11.3□□□□□ -0.6
CCDC61-201ENST00000536603 UBR4Q5T4S7 5183 aa11.29□□□□□ -0.6
CCDC61-201ENST00000536603 SCGB1D1O95968 90 aa11.28□□□□□ -0.6
CCDC61-201ENST00000536603 TLX1NBP0CAT3 122 aa11.28□□□□□ -0.6
CCDC61-201ENST00000536603 C9orf116Q5BN46 136 aaPredicted RBP11.28□□□□□ -0.6
CCDC61-201ENST00000536603 Q6ZRP5 223 aa11.28□□□□□ -0.6
CCDC61-201ENST00000536603 TSPEAR-AS2P59090 65 aa11.27□□□□□ -0.61
CCDC61-201ENST00000536603 JOSD1Q15040 202 aaPredicted RBP11.27□□□□□ -0.61
CCDC61-201ENST00000536603 COX7B2Q8TF08 81 aa11.27□□□□□ -0.61
CCDC61-201ENST00000536603 C7orf33Q8WU49 177 aa11.27□□□□□ -0.61
CCDC61-201ENST00000536603 A0A1W2PNN7 141 aa11.26□□□□□ -0.61
CCDC61-201ENST00000536603 GAGE2EQ4V326 116 aa11.26□□□□□ -0.61
CCDC61-201ENST00000536603 GAGE2DQ9UEU5 116 aa11.26□□□□□ -0.61
CCDC61-201ENST00000536603 LOC105371267A0A1B0GV96 52 aa11.25□□□□□ -0.61
CCDC61-201ENST00000536603 ANKRD39Q53RE8 183 aa11.25□□□□□ -0.61
CCDC61-201ENST00000536603 PYY3Q5JQD4 70 aa11.25□□□□□ -0.61
CCDC61-201ENST00000536603 FAT3Q8TDW7 4589 aa11.24□□□□□ -0.61
CCDC61-201ENST00000536603 IGKV2D-26A0A0A0MRZ7 120 aa11.24□□□□□ -0.61
CCDC61-201ENST00000536603 NDUFC2-KCTD14E9PQ53 114 aa11.24□□□□□ -0.61
CCDC61-201ENST00000536603 CXCL5P42830 114 aa11.24□□□□□ -0.61
CCDC61-201ENST00000536603 AKR1D1P51857 326 aa11.24□□□□□ -0.61
CCDC61-201ENST00000536603 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
CCDC61-201ENST00000536603 E9PLD3 99 aa11.23□□□□□ -0.61
CCDC61-201ENST00000536603 LEPROTO15243 131 aa11.23□□□□□ -0.61
CCDC61-201ENST00000536603 HERVK_113P61574 105 aa11.22□□□□□ -0.61
CCDC61-201ENST00000536603 FAM168BA1KXE4 195 aa11.21□□□□□ -0.61
CCDC61-201ENST00000536603 ZNF625Q96I27 306 aaPredicted RBP11.21□□□□□ -0.61
CCDC61-201ENST00000536603 J3QQQ9 107 aa11.2□□□□□ -0.62
CCDC61-201ENST00000536603 TTTY13Q9BZ97 58 aa11.2□□□□□ -0.62
CCDC61-201ENST00000536603 PLEKHB2Q96CS7 222 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms