RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 C12orf57Q99622 126 aa7.51□□□□□ -1.21
CDCA3-206ENST00000536241 DNAH6Q9C0G6 4158 aa7.51□□□□□ -1.21
CDCA3-206ENST00000536241 SACSQ9NZJ4 4579 aa7.5□□□□□ -1.21
CDCA3-206ENST00000536241 NDUFA1O15239 70 aa7.5□□□□□ -1.21
CDCA3-206ENST00000536241 FUSP35637 526 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDCA3-206ENST00000536241 SYCNQ0VAF6 134 aa7.5□□□□□ -1.21
CDCA3-206ENST00000536241 Q6ZRU5 148 aa7.5□□□□□ -1.21
CDCA3-206ENST00000536241 MYMXA0A1B0GTQ4 84 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 ZNF815PA8K554 130 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 EREGO14944 169 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 CXCL5P42830 114 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 LINC00518Q8N0U6 118 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 DNAH10Q8IVF4 4471 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 F8WDY8 70 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 COX8AP10176 69 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 C9orf116Q5BN46 136 aaPredicted RBP7.49□□□□□ -1.21
CDCA3-206ENST00000536241 LINC00336Q6ZUF6 198 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 C6orf48Q9UBA6 75 aa7.49□□□□□ -1.21
CDCA3-206ENST00000536241 CARD19Q96LW7 228 aa7.48□□□□□ -1.21
CDCA3-206ENST00000536241 TP73-AS1Q9UF72 201 aa7.48□□□□□ -1.21
CDCA3-206ENST00000536241 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
CDCA3-206ENST00000536241 HERV-K104P63124 156 aa7.47□□□□□ -1.21
CDCA3-206ENST00000536241 SFTA2Q6UW10 78 aa7.47□□□□□ -1.21
CDCA3-206ENST00000536241 BOD1L2Q8IYS8 172 aa7.47□□□□□ -1.21
CDCA3-206ENST00000536241 PRO1933Q9H354 126 aa7.47□□□□□ -1.21
CDCA3-206ENST00000536241 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
CDCA3-206ENST00000536241 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-206ENST00000536241 A0A0J9YXY3 114 aa7.46□□□□□ -1.22
CDCA3-206ENST00000536241 TRBV30A0A0K0K1B3 111 aa7.46□□□□□ -1.22
CDCA3-206ENST00000536241 A0A0U1RRA0 63 aa7.46□□□□□ -1.22
CDCA3-206ENST00000536241 PFN2P35080 140 aa7.46□□□□□ -1.22
CDCA3-206ENST00000536241 DNAH2Q9P225 4427 aa7.45□□□□□ -1.22
CDCA3-206ENST00000536241 KRTAP10-2P60368 255 aa7.45□□□□□ -1.22
CDCA3-206ENST00000536241 LINC01620Q4KN68 170 aa7.45□□□□□ -1.22
CDCA3-206ENST00000536241 MEIG1Q5JSS6 88 aa7.45□□□□□ -1.22
CDCA3-206ENST00000536241 SLC25A34Q6PIV7 304 aa7.45□□□□□ -1.22
CDCA3-206ENST00000536241 C9orf163Q8N9P6 203 aa7.45□□□□□ -1.22
CDCA3-206ENST00000536241 ERG28Q9UKR5 140 aa7.45□□□□□ -1.22
CDCA3-206ENST00000536241 DLEU1O43261 78 aa7.44□□□□□ -1.22
CDCA3-206ENST00000536241 SMIM13P0DJ93 91 aa7.44□□□□□ -1.22
CDCA3-206ENST00000536241 LINC00158P58513 81 aa7.44□□□□□ -1.22
CDCA3-206ENST00000536241 RNF151Q2KHN1 245 aa7.44□□□□□ -1.22
CDCA3-206ENST00000536241 SCGB1D4Q6XE38 83 aa7.44□□□□□ -1.22
CDCA3-206ENST00000536241 IGLV5-52A0A0A0MRZ9 124 aa7.43□□□□□ -1.22
CDCA3-206ENST00000536241 ADAMTSL4-AS1Q5T5F5 129 aa7.43□□□□□ -1.22
CDCA3-206ENST00000536241 PGPEP1Q9NXJ5 209 aa7.43□□□□□ -1.22
CDCA3-206ENST00000536241 CIRBPQ14011 172 aaKnown RBP7.43□□□□□ -1.22
CDCA3-206ENST00000536241 LINC00587B1AMM8 73 aa7.42□□□□□ -1.22
CDCA3-206ENST00000536241 COX17Q14061 63 aa7.42□□□□□ -1.22
CDCA3-206ENST00000536241 SDIM1Q6ZPB5 146 aa7.42□□□□□ -1.22
CDCA3-206ENST00000536241 Q6ZRP5 223 aa7.42□□□□□ -1.22
CDCA3-206ENST00000536241 DAND5Q8N907 189 aa7.42□□□□□ -1.22
CDCA3-206ENST00000536241 UQCR10Q9UDW1 63 aa7.42□□□□□ -1.22
CDCA3-206ENST00000536241 RYR2Q92736 4967 aa7.41□□□□□ -1.22
CDCA3-206ENST00000536241 DNAH17Q9UFH2 4485 aa7.41□□□□□ -1.22
CDCA3-206ENST00000536241 A0A1B0GVY2 172 aa7.41□□□□□ -1.22
CDCA3-206ENST00000536241 NDUFC2-KCTD14E9PQ53 114 aa7.41□□□□□ -1.22
CDCA3-206ENST00000536241 GAGE2EQ4V326 116 aa7.41□□□□□ -1.22
CDCA3-206ENST00000536241 MIR7-3HGQ8N6C7 128 aa7.41□□□□□ -1.22
CDCA3-206ENST00000536241 LITAFQ99732 161 aa7.41□□□□□ -1.22
CDCA3-206ENST00000536241 MIEN1Q9BRT3 115 aa7.41□□□□□ -1.22
CDCA3-206ENST00000536241 GAGE2DQ9UEU5 116 aa7.41□□□□□ -1.22
CDCA3-206ENST00000536241 LOC107984640A0A0U1RRK4 108 aa7.4□□□□□ -1.22
CDCA3-206ENST00000536241 TIMM17BO60830 172 aa7.4□□□□□ -1.22
CDCA3-206ENST00000536241 TLX1NBP0CAT3 122 aa7.4□□□□□ -1.22
CDCA3-206ENST00000536241 RPL18AQ02543 176 aaKnown RBP7.4□□□□□ -1.22
CDCA3-206ENST00000536241 GAGE2BQ13066 116 aa7.4□□□□□ -1.22
CDCA3-206ENST00000536241 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.22
CDCA3-206ENST00000536241 XAGE1AQ9HD64 81 aa7.39□□□□□ -1.23
CDCA3-206ENST00000536241 FRAS1Q86XX4 4008 aa7.39□□□□□ -1.23
CDCA3-206ENST00000536241 TMEM238C9JI98 176 aa7.38□□□□□ -1.23
CDCA3-206ENST00000536241 TSTD3H0UI37 97 aa7.38□□□□□ -1.23
CDCA3-206ENST00000536241 GCSHP23434 173 aa7.38□□□□□ -1.23
CDCA3-206ENST00000536241 NPC2P61916 151 aa7.38□□□□□ -1.23
CDCA3-206ENST00000536241 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
CDCA3-206ENST00000536241 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
CDCA3-206ENST00000536241 HIGD1BQ9P298 99 aa7.38□□□□□ -1.23
CDCA3-206ENST00000536241 A0A096LNI7 61 aa7.37□□□□□ -1.23
CDCA3-206ENST00000536241 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
CDCA3-206ENST00000536241 IGKV2-24A0A0C4DH68 120 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 C16orf90A8MZG2 172 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 CHTF8P0CG12 524 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 PTTG1IPP53801 180 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 HIST1H4GQ99525 98 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
CDCA3-206ENST00000536241 SPANXCQ9NY87 97 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 HNRNPA3P51991 378 aaKnown RBP7.36□□□□□ -1.23
CDCA3-206ENST00000536241 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
CDCA3-206ENST00000536241 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 MUSTN1Q8IVN3 82 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 LINC00308Q8TCZ7 52 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 DPH3Q96FX2 82 aa7.36□□□□□ -1.23
CDCA3-206ENST00000536241 PANO1I0J062 215 aa7.35□□□□□ -1.23
CDCA3-206ENST00000536241 Q6ZVH6 145 aa7.35□□□□□ -1.23
CDCA3-206ENST00000536241 FAT2Q9NYQ8 4349 aa7.34□□□□□ -1.23
CDCA3-206ENST00000536241 PKIGQ9Y2B9 76 aa7.34□□□□□ -1.23
CDCA3-206ENST00000536241 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.34□□□□□ -1.23
CDCA3-206ENST00000536241 LOC107984156A0A0G2JMH3 177 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms