RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 FABP4P15090 132 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 S100A2P29034 98 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 UBE2D1P51668 147 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 MAJINQ3KP22 176 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIGD2BQ4VC39 106 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
LMO3-213ENST00000536172 REG3GQ6UW15 175 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 FAM19A2Q8N3H0 131 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
LMO3-213ENST00000536172 GVQW2A0A096LPI5 108 aaPredicted RBP6.97□□□□□ -1.29
LMO3-213ENST00000536172 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 F8WDY8 70 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 CKS1BP61024 79 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 C6orf226Q5I0X4 101 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 LINC00242Q5T6M2 205 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 SPINK6Q6UWN8 80 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 STPG4Q8N801 248 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 OR10D4PQ8NGN7 298 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 ORAOV1Q8WV07 137 aa6.97□□□□□ -1.29
LMO3-213ENST00000536172 CHTOPQ9Y3Y2 248 aaKnown RBP6.97□□□□□ -1.29
LMO3-213ENST00000536172 A0A087WZ39 114 aa6.96□□□□□ -1.3
LMO3-213ENST00000536172 A0A0J9YXV3 536 aa6.96□□□□□ -1.3
LMO3-213ENST00000536172 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
LMO3-213ENST00000536172 CAMK2N2Q96S95 79 aa6.96□□□□□ -1.3
LMO3-213ENST00000536172 TOMM7Q9P0U1 55 aa6.96□□□□□ -1.3
LMO3-213ENST00000536172 IGKV2-24A0A0C4DH68 120 aa6.95□□□□□ -1.3
LMO3-213ENST00000536172 TMEM170BQ5T4T1 132 aa6.95□□□□□ -1.3
LMO3-213ENST00000536172 ZC2HC1BQ5TFG8 222 aa6.95□□□□□ -1.3
LMO3-213ENST00000536172 URB1-AS1Q96HZ7 61 aa6.95□□□□□ -1.3
LMO3-213ENST00000536172 TRAV12-1A0A0B4J245 112 aa6.94□□□□□ -1.3
LMO3-213ENST00000536172 IGHV3OR16-9A0A0B4J2B5 98 aa6.94□□□□□ -1.3
LMO3-213ENST00000536172 C20orf202A1L168 122 aa6.94□□□□□ -1.3
LMO3-213ENST00000536172 NDUFA1O15239 70 aa6.94□□□□□ -1.3
LMO3-213ENST00000536172 AKR1D1P51857 326 aa6.94□□□□□ -1.3
LMO3-213ENST00000536172 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
LMO3-213ENST00000536172 C2orf48Q96LS8 159 aa6.94□□□□□ -1.3
LMO3-213ENST00000536172 CARD19Q96LW7 228 aa6.94□□□□□ -1.3
LMO3-213ENST00000536172 IGLV4-69A0A075B6H9 119 aa6.93□□□□□ -1.3
LMO3-213ENST00000536172 A0A096LNI7 61 aa6.93□□□□□ -1.3
LMO3-213ENST00000536172 PLNP26678 52 aa6.93□□□□□ -1.3
LMO3-213ENST00000536172 KRTAP10-8P60410 259 aa6.93□□□□□ -1.3
LMO3-213ENST00000536172 HERVK_113P61574 105 aa6.93□□□□□ -1.3
LMO3-213ENST00000536172 Q6ZRP5 223 aa6.93□□□□□ -1.3
LMO3-213ENST00000536172 LINC00173Q6ZV60 143 aa6.93□□□□□ -1.3
LMO3-213ENST00000536172 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
LMO3-213ENST00000536172 TNXBP22105 4242 aa6.93□□□□□ -1.3
LMO3-213ENST00000536172 F8VRH5 84 aa6.92□□□□□ -1.3
LMO3-213ENST00000536172 CXCL5P42830 114 aa6.92□□□□□ -1.3
LMO3-213ENST00000536172 CDKN2A-AS1Q9UH64 79 aa6.92□□□□□ -1.3
LMO3-213ENST00000536172 A0A096LNJ9 63 aa6.91□□□□□ -1.3
LMO3-213ENST00000536172 IGLC3P0DOY3 106 aa6.91□□□□□ -1.3
LMO3-213ENST00000536172 SFTA2Q6UW10 78 aa6.91□□□□□ -1.3
LMO3-213ENST00000536172 FAM104AQ969W3 186 aa6.91□□□□□ -1.3
LMO3-213ENST00000536172 DPM2O94777 84 aa6.9□□□□□ -1.3
LMO3-213ENST00000536172 SRSF9Q13242 221 aaKnown RBP eCLIP6.9□□□□□ -1.3
LMO3-213ENST00000536172 COX7B2Q8TF08 81 aa6.9□□□□□ -1.3
LMO3-213ENST00000536172 LRP2P98164 4655 aa6.89□□□□□ -1.31
LMO3-213ENST00000536172 LOC107984640A0A0U1RRK4 108 aa6.89□□□□□ -1.31
LMO3-213ENST00000536172 NUPR1O60356 82 aa6.89□□□□□ -1.31
LMO3-213ENST00000536172 SPINK8P0C7L1 97 aa6.89□□□□□ -1.31
LMO3-213ENST00000536172 KRTDAPP60985 99 aa6.89□□□□□ -1.31
LMO3-213ENST00000536172 COA6Q5JTJ3 125 aaKnown RBP6.89□□□□□ -1.31
LMO3-213ENST00000536172 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
LMO3-213ENST00000536172 Q8IZM0 81 aa6.89□□□□□ -1.31
LMO3-213ENST00000536172 LINC00526Q96FQ7 95 aa6.89□□□□□ -1.31
LMO3-213ENST00000536172 MRPL35Q9NZE8 188 aaKnown RBP6.89□□□□□ -1.31
LMO3-213ENST00000536172 IGKCP01834 107 aa6.88□□□□□ -1.31
LMO3-213ENST00000536172 RNF151Q2KHN1 245 aa6.88□□□□□ -1.31
LMO3-213ENST00000536172 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
LMO3-213ENST00000536172 TRBV30A0A0K0K1B3 111 aa6.87□□□□□ -1.31
LMO3-213ENST00000536172 C11orf86A6NJI1 115 aa6.87□□□□□ -1.31
LMO3-213ENST00000536172 LINC00587B1AMM8 73 aa6.87□□□□□ -1.31
LMO3-213ENST00000536172 SYS1-DBNDD2H3BUS1 97 aa6.87□□□□□ -1.31
LMO3-213ENST00000536172 PTTG1IPP53801 180 aa6.87□□□□□ -1.31
LMO3-213ENST00000536172 RPL18AQ02543 176 aaKnown RBP6.87□□□□□ -1.31
LMO3-213ENST00000536172 SMIM1B2RUZ4 78 aa6.86□□□□□ -1.31
LMO3-213ENST00000536172 ZNF22P17026 224 aaPredicted RBP6.86□□□□□ -1.31
LMO3-213ENST00000536172 LINC00310P59036 64 aa6.86□□□□□ -1.31
LMO3-213ENST00000536172 GAGE2BQ13066 116 aa6.86□□□□□ -1.31
LMO3-213ENST00000536172 ODF1Q14990 250 aa6.86□□□□□ -1.31
LMO3-213ENST00000536172 HSBP1L1C9JCN9 74 aa6.85□□□□□ -1.31
LMO3-213ENST00000536172 UNQ6190/PRO20217Q6UXQ8 127 aa6.85□□□□□ -1.31
LMO3-213ENST00000536172 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
LMO3-213ENST00000536172 LGALS3P17931 250 aaKnown RBP6.84□□□□□ -1.31
LMO3-213ENST00000536172 SNRPEP62304 92 aaKnown RBP6.84□□□□□ -1.31
LMO3-213ENST00000536172 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
LMO3-213ENST00000536172 MYMXA0A1B0GTQ4 84 aa6.83□□□□□ -1.32
LMO3-213ENST00000536172 GAGE2EQ4V326 116 aa6.83□□□□□ -1.32
LMO3-213ENST00000536172 C2orf82Q6UX34 121 aa6.83□□□□□ -1.32
LMO3-213ENST00000536172 PMCHL2Q9BQD1 86 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms