RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TP73-AS1Q9UF72 201 aa7.67□□□□□ -1.18
TNFRSF1A-207ENST00000535958 A0A087X002 238 aa7.66□□□□□ -1.18
TNFRSF1A-207ENST00000535958 F8VRH5 84 aa7.66□□□□□ -1.18
TNFRSF1A-207ENST00000535958 CXCL5P42830 114 aa7.66□□□□□ -1.18
TNFRSF1A-207ENST00000535958 PAPPA-AS1Q5QFB9 102 aa7.66□□□□□ -1.18
TNFRSF1A-207ENST00000535958 NPSP0C0P6 89 aa7.65□□□□□ -1.18
TNFRSF1A-207ENST00000535958 ZC2HC1BQ5TFG8 222 aa7.65□□□□□ -1.18
TNFRSF1A-207ENST00000535958 UBE2AP49459 152 aa7.64□□□□□ -1.19
TNFRSF1A-207ENST00000535958 LINC00173Q6ZV60 143 aa7.64□□□□□ -1.19
TNFRSF1A-207ENST00000535958 Q8N8P6 123 aa7.64□□□□□ -1.19
TNFRSF1A-207ENST00000535958 AMELXQ99217 191 aa7.64□□□□□ -1.19
TNFRSF1A-207ENST00000535958 RPL37AP8A6NKH3 93 aa7.63□□□□□ -1.19
TNFRSF1A-207ENST00000535958 C9JQL5 133 aa7.63□□□□□ -1.19
TNFRSF1A-207ENST00000535958 G0S2P27469 103 aa7.63□□□□□ -1.19
TNFRSF1A-207ENST00000535958 NKAPP1Q8N9T2 125 aa7.63□□□□□ -1.19
TNFRSF1A-207ENST00000535958 CDIP1Q9H305 208 aa7.63□□□□□ -1.19
TNFRSF1A-207ENST00000535958 GAGE10A6NGK3 116 aa7.62□□□□□ -1.19
TNFRSF1A-207ENST00000535958 PRSS47A8MTI9 375 aa7.62□□□□□ -1.19
TNFRSF1A-207ENST00000535958 K7EMI3 77 aa7.62□□□□□ -1.19
TNFRSF1A-207ENST00000535958 FAM19A3Q7Z5A8 133 aa7.62□□□□□ -1.19
TNFRSF1A-207ENST00000535958 LINC00304Q8N9R0 145 aa7.62□□□□□ -1.19
TNFRSF1A-207ENST00000535958 CDKN2A-AS1Q9UH64 79 aa7.62□□□□□ -1.19
TNFRSF1A-207ENST00000535958 SRSF3P84103 164 aaKnown RBP7.61□□□□□ -1.19
TNFRSF1A-207ENST00000535958 LINC00167Q96N53 147 aa7.61□□□□□ -1.19
TNFRSF1A-207ENST00000535958 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
TNFRSF1A-207ENST00000535958 IGKV2D-26A0A0A0MRZ7 120 aa7.6□□□□□ -1.19
TNFRSF1A-207ENST00000535958 NXT2Q9NPJ8 142 aaKnown RBP7.6□□□□□ -1.19
TNFRSF1A-207ENST00000535958 ANAPC11Q9NYG5 84 aa7.6□□□□□ -1.19
TNFRSF1A-207ENST00000535958 IGIPA6NJ69 53 aa7.59□□□□□ -1.19
TNFRSF1A-207ENST00000535958 FAM229BQ4G0N7 80 aa7.59□□□□□ -1.19
TNFRSF1A-207ENST00000535958 COX7B2Q8TF08 81 aa7.59□□□□□ -1.19
TNFRSF1A-207ENST00000535958 TIMM17AQ99595 171 aa7.59□□□□□ -1.19
TNFRSF1A-207ENST00000535958 RAB5BP61020 215 aa7.58□□□□□ -1.2
TNFRSF1A-207ENST00000535958 IGKV2-28A0A075B6P5 120 aa7.57□□□□□ -1.2
TNFRSF1A-207ENST00000535958 IGKV2D-28P01615 120 aa7.57□□□□□ -1.2
TNFRSF1A-207ENST00000535958 PNRC1Q12796 327 aaPredicted RBP7.57□□□□□ -1.2
TNFRSF1A-207ENST00000535958 PDZD11Q5EBL8 140 aa7.57□□□□□ -1.2
TNFRSF1A-207ENST00000535958 IGLV7-46A0A075B6I9 117 aa7.56□□□□□ -1.2
TNFRSF1A-207ENST00000535958 SMIM1B2RUZ4 78 aa7.56□□□□□ -1.2
TNFRSF1A-207ENST00000535958 MT-ND4LP03901 98 aa7.56□□□□□ -1.2
TNFRSF1A-207ENST00000535958 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
TNFRSF1A-207ENST00000535958 KRTAP13-2Q52LG2 175 aa7.56□□□□□ -1.2
TNFRSF1A-207ENST00000535958 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
TNFRSF1A-207ENST00000535958 TOMM6Q96B49 74 aa7.56□□□□□ -1.2
TNFRSF1A-207ENST00000535958 ANAPC16Q96DE5 110 aa7.56□□□□□ -1.2
TNFRSF1A-207ENST00000535958 SCGB3A1Q96QR1 104 aa7.56□□□□□ -1.2
TNFRSF1A-207ENST00000535958 FAT4Q6V0I7 4981 aa7.55□□□□□ -1.2
TNFRSF1A-207ENST00000535958 IGLV5-37A0A075B6J1 123 aa7.55□□□□□ -1.2
TNFRSF1A-207ENST00000535958 ATP5LO75964 103 aa7.55□□□□□ -1.2
TNFRSF1A-207ENST00000535958 TINCRA0A1B0GVN0 87 aa7.54□□□□□ -1.2
TNFRSF1A-207ENST00000535958 PRLHP81277 87 aa7.54□□□□□ -1.2
TNFRSF1A-207ENST00000535958 ERASQ7Z444 233 aa7.54□□□□□ -1.2
TNFRSF1A-207ENST00000535958 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
TNFRSF1A-207ENST00000535958 H3BRM9 83 aa7.53□□□□□ -1.2
TNFRSF1A-207ENST00000535958 SPINK8P0C7L1 97 aa7.53□□□□□ -1.2
TNFRSF1A-207ENST00000535958 KRTAP13-1Q8IUC0 172 aa7.53□□□□□ -1.2
TNFRSF1A-207ENST00000535958 MUC17Q685J3 4493 aa7.52□□□□□ -1.21
TNFRSF1A-207ENST00000535958 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
TNFRSF1A-207ENST00000535958 LINC01549A6NIU2 74 aa7.52□□□□□ -1.21
TNFRSF1A-207ENST00000535958 CTAG1AP78358 180 aa7.52□□□□□ -1.21
TNFRSF1A-207ENST00000535958 PFN2P35080 140 aa7.51□□□□□ -1.21
TNFRSF1A-207ENST00000535958 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
TNFRSF1A-207ENST00000535958 SCO1O75880 301 aa7.5□□□□□ -1.21
TNFRSF1A-207ENST00000535958 RPL24P83731 157 aaKnown RBP7.5□□□□□ -1.21
TNFRSF1A-207ENST00000535958 TMEM126AQ9H061 195 aa7.5□□□□□ -1.21
TNFRSF1A-207ENST00000535958 MRPL18Q9H0U6 180 aaKnown RBP7.5□□□□□ -1.21
TNFRSF1A-207ENST00000535958 PPDPFQ9H3Y8 114 aa7.5□□□□□ -1.21
TNFRSF1A-207ENST00000535958 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
TNFRSF1A-207ENST00000535958 CBLN2Q8IUK8 224 aa7.49□□□□□ -1.21
TNFRSF1A-207ENST00000535958 TMEM238C9JI98 176 aa7.48□□□□□ -1.21
TNFRSF1A-207ENST00000535958 ADCYAP1P18509 176 aa7.48□□□□□ -1.21
TNFRSF1A-207ENST00000535958 PMVKQ15126 192 aa7.48□□□□□ -1.21
TNFRSF1A-207ENST00000535958 KIAA1644Q3SXP7 199 aa7.48□□□□□ -1.21
TNFRSF1A-207ENST00000535958 SPAG11AQ6PDA7 123 aa7.48□□□□□ -1.21
TNFRSF1A-207ENST00000535958 HIGD2AQ9BW72 106 aa7.48□□□□□ -1.21
TNFRSF1A-207ENST00000535958 CST9LQ9H4G1 147 aa7.48□□□□□ -1.21
TNFRSF1A-207ENST00000535958 SMCO4Q9NRQ5 59 aa7.48□□□□□ -1.21
TNFRSF1A-207ENST00000535958 LINC00337Q8N6G1 96 aa7.47□□□□□ -1.21
TNFRSF1A-207ENST00000535958 GNB1LQ9BYB4 327 aa7.47□□□□□ -1.21
TNFRSF1A-207ENST00000535958 FA2HQ7L5A8 372 aa7.46□□□□□ -1.22
TNFRSF1A-207ENST00000535958 SND1-IT1Q9HBX3 110 aa7.46□□□□□ -1.22
TNFRSF1A-207ENST00000535958 ERG28Q9UKR5 140 aa7.46□□□□□ -1.22
TNFRSF1A-207ENST00000535958 A0A1B0GVG6 124 aa7.45□□□□□ -1.22
TNFRSF1A-207ENST00000535958 VPREB1P12018 145 aa7.45□□□□□ -1.22
TNFRSF1A-207ENST00000535958 NDUFA6P56556 154 aa7.45□□□□□ -1.22
TNFRSF1A-207ENST00000535958 RAB14P61106 215 aa7.45□□□□□ -1.22
TNFRSF1A-207ENST00000535958 COX17Q14061 63 aa7.45□□□□□ -1.22
TNFRSF1A-207ENST00000535958 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
TNFRSF1A-207ENST00000535958 C3orf22Q8N5N4 141 aa7.45□□□□□ -1.22
TNFRSF1A-207ENST00000535958 ZNF706Q9Y5V0 76 aaPredicted RBP7.45□□□□□ -1.22
TNFRSF1A-207ENST00000535958 M0R378 163 aa7.44□□□□□ -1.22
TNFRSF1A-207ENST00000535958 PLEKHB2Q96CS7 222 aa7.44□□□□□ -1.22
TNFRSF1A-207ENST00000535958 S100PP25815 95 aa7.43□□□□□ -1.22
TNFRSF1A-207ENST00000535958 SFTA2Q6UW10 78 aa7.43□□□□□ -1.22
TNFRSF1A-207ENST00000535958 TRAV9-1A0A075B6T8 112 aa7.42□□□□□ -1.22
TNFRSF1A-207ENST00000535958 LINC01547P58512 204 aaPredicted RBP7.42□□□□□ -1.22
TNFRSF1A-207ENST00000535958 ZNF625Q96I27 306 aaPredicted RBP7.42□□□□□ -1.22
TNFRSF1A-207ENST00000535958 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
TNFRSF1A-207ENST00000535958 IGLC3P0DOY3 106 aa7.41□□□□□ -1.22
TNFRSF1A-207ENST00000535958 NDUFA12Q9UI09 145 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms