RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 TMEM238C9JI98 176 aa15.15■□□□□ 0.02
RBFOX1-206ENST00000535565 CIRBPQ14011 172 aaKnown RBP15.15■□□□□ 0.02
RBFOX1-206ENST00000535565 MEIG1Q5JSS6 88 aa15.15■□□□□ 0.02
RBFOX1-206ENST00000535565 C2orf82Q6UX34 121 aa15.15■□□□□ 0.02
RBFOX1-206ENST00000535565 C6orf223Q8N319 242 aa15.14■□□□□ 0.01
RBFOX1-206ENST00000535565 NTN5Q8WTR8 489 aaPredicted RBP15.14■□□□□ 0.01
RBFOX1-206ENST00000535565 LINC00526Q96FQ7 95 aa15.14■□□□□ 0.01
RBFOX1-206ENST00000535565 LINC00587B1AMM8 73 aa15.13■□□□□ 0.01
RBFOX1-206ENST00000535565 TIMM17BO60830 172 aa15.13■□□□□ 0.01
RBFOX1-206ENST00000535565 F8WDY8 70 aa15.12■□□□□ 0.01
RBFOX1-206ENST00000535565 C2orf48Q96LS8 159 aa15.12■□□□□ 0.01
RBFOX1-206ENST00000535565 CAMK2N2Q96S95 79 aa15.11■□□□□ 0.01
RBFOX1-206ENST00000535565 HIST1H4GQ99525 98 aa15.11■□□□□ 0.01
RBFOX1-206ENST00000535565 SPANXB1Q9NS25 103 aaPredicted RBP15.11■□□□□ 0.01
RBFOX1-206ENST00000535565 HSD52Q0P140 79 aa15.11■□□□□ 0.01
RBFOX1-206ENST00000535565 SRSF9Q13242 221 aaKnown RBP eCLIP15.11■□□□□ 0.01
RBFOX1-206ENST00000535565 Q6ZRN7 208 aaPredicted RBP15.11■□□□□ 0.01
RBFOX1-206ENST00000535565 ALMS1Q8TCU4 4167 aa15.11■□□□□ 0.01
RBFOX1-206ENST00000535565 LECT2O14960 151 aa15.1■□□□□ 0.01
RBFOX1-206ENST00000535565 TAL2Q16559 108 aa15.1■□□□□ 0.01
RBFOX1-206ENST00000535565 UNQ6190/PRO20217Q6UXQ8 127 aa15.09■□□□□ 0.01
RBFOX1-206ENST00000535565 LITAFQ99732 161 aa15.08■□□□□ 0
RBFOX1-206ENST00000535565 ERG28Q9UKR5 140 aa15.08■□□□□ 0
RBFOX1-206ENST00000535565 C14orf177Q52M58 125 aa15.07■□□□□ 0
RBFOX1-206ENST00000535565 C1orf134Q5TEV5 83 aa15.07■□□□□ 0
RBFOX1-206ENST00000535565 SMIM13P0DJ93 91 aa15.07■□□□□ 0
RBFOX1-206ENST00000535565 C10orf25Q5T742 122 aa15.07■□□□□ 0
RBFOX1-206ENST00000535565 Q6ZVH6 145 aa15.07■□□□□ 0
RBFOX1-206ENST00000535565 SPANXDQ9BXN6 97 aa15.07■□□□□ 0
RBFOX1-206ENST00000535565 SPANXCQ9NY87 97 aa15.07■□□□□ 0
RBFOX1-206ENST00000535565 TRBV30A0A0K0K1B3 111 aa15.06■□□□□ 0
RBFOX1-206ENST00000535565 A0A0U1RRA0 63 aa15.06■□□□□ 0
RBFOX1-206ENST00000535565 M0R143 59 aa15.05■□□□□ -0
RBFOX1-206ENST00000535565 PFN2P35080 140 aa15.05■□□□□ -0
RBFOX1-206ENST00000535565 LINC00158P58513 81 aa15.05■□□□□ -0
RBFOX1-206ENST00000535565 COX17Q14061 63 aa15.05■□□□□ -0
RBFOX1-206ENST00000535565 ADAMTSL4-AS1Q5T5F5 129 aa15.05■□□□□ -0
RBFOX1-206ENST00000535565 SYCNQ0VAF6 134 aa15.04■□□□□ -0
RBFOX1-206ENST00000535565 GCSHP23434 173 aa15.03■□□□□ -0
RBFOX1-206ENST00000535565 HINT1P49773 126 aaPredicted RBP15.03■□□□□ -0
RBFOX1-206ENST00000535565 WFDC2Q14508 124 aa15.03■□□□□ -0
RBFOX1-206ENST00000535565 Q6ZRU5 148 aa15.03■□□□□ -0
RBFOX1-206ENST00000535565 CEND1Q8N111 149 aa15.03■□□□□ -0
RBFOX1-206ENST00000535565 C6orf48Q9UBA6 75 aa15.02■□□□□ -0
RBFOX1-206ENST00000535565 DAND5Q8N907 189 aa15.02□□□□□ -0.01
RBFOX1-206ENST00000535565 CARD19Q96LW7 228 aa15.02□□□□□ -0.01
RBFOX1-206ENST00000535565 KMT2AQ03164 3969 aa15.01□□□□□ -0.01
RBFOX1-206ENST00000535565 LRCOL1A6NCL2 159 aa15.01□□□□□ -0.01
RBFOX1-206ENST00000535565 C9orf116Q5BN46 136 aaPredicted RBP15.01□□□□□ -0.01
RBFOX1-206ENST00000535565 COPS9Q8WXC6 57 aa15.01□□□□□ -0.01
RBFOX1-206ENST00000535565 DNAH6Q9C0G6 4158 aa15□□□□□ -0.01
RBFOX1-206ENST00000535565 IFITM1P13164 125 aa15□□□□□ -0.01
RBFOX1-206ENST00000535565 BVES-AS1Q5T3Y7 98 aa15□□□□□ -0.01
RBFOX1-206ENST00000535565 MIR7-3HGQ8N6C7 128 aa15□□□□□ -0.01
RBFOX1-206ENST00000535565 BATFQ16520 125 aa14.99□□□□□ -0.01
RBFOX1-206ENST00000535565 LCE6AA0A183 80 aa14.98□□□□□ -0.01
RBFOX1-206ENST00000535565 PTTG1IPP53801 180 aa14.98□□□□□ -0.01
RBFOX1-206ENST00000535565 MUSTN1Q8IVN3 82 aa14.98□□□□□ -0.01
RBFOX1-206ENST00000535565 NPC2P61916 151 aa14.97□□□□□ -0.01
RBFOX1-206ENST00000535565 RPL24P83731 157 aaKnown RBP14.97□□□□□ -0.01
RBFOX1-206ENST00000535565 RNF151Q2KHN1 245 aa14.97□□□□□ -0.01
RBFOX1-206ENST00000535565 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.96□□□□□ -0.01
RBFOX1-206ENST00000535565 TMEM238LA0A1B0GVL6 79 aa14.96□□□□□ -0.01
RBFOX1-206ENST00000535565 A6NJY4 79 aa14.96□□□□□ -0.01
RBFOX1-206ENST00000535565 SLPIP03973 132 aa14.96□□□□□ -0.01
RBFOX1-206ENST00000535565 LINC00308Q8TCZ7 52 aa14.96□□□□□ -0.01
RBFOX1-206ENST00000535565 SNHG12Q9BXW3 62 aa14.95□□□□□ -0.02
RBFOX1-206ENST00000535565 A0A087WTM6 91 aa14.94□□□□□ -0.02
RBFOX1-206ENST00000535565 FXYD2P54710 66 aa14.94□□□□□ -0.02
RBFOX1-206ENST00000535565 CNBPP62633 177 aaKnown RBP14.94□□□□□ -0.02
RBFOX1-206ENST00000535565 DNAH10Q8IVF4 4471 aa14.94□□□□□ -0.02
RBFOX1-206ENST00000535565 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.93□□□□□ -0.02
RBFOX1-206ENST00000535565 Q8N814 137 aa14.93□□□□□ -0.02
RBFOX1-206ENST00000535565 PPDPFQ9H3Y8 114 aa14.93□□□□□ -0.02
RBFOX1-206ENST00000535565 NDUFC2-KCTD14E9PQ53 114 aa14.92□□□□□ -0.02
RBFOX1-206ENST00000535565 EREGO14944 169 aa14.92□□□□□ -0.02
RBFOX1-206ENST00000535565 A6NDN8 102 aa14.91□□□□□ -0.02
RBFOX1-206ENST00000535565 A4D1N5 150 aa14.9□□□□□ -0.02
RBFOX1-206ENST00000535565 SOSTDC1Q6X4U4 206 aa14.9□□□□□ -0.02
RBFOX1-206ENST00000535565 SND1-IT1Q9HBX3 110 aa14.9□□□□□ -0.02
RBFOX1-206ENST00000535565 TLX1NBP0CAT3 122 aa14.89□□□□□ -0.03
RBFOX1-206ENST00000535565 EIF4EBP3O60516 100 aaPredicted RBP14.88□□□□□ -0.03
RBFOX1-206ENST00000535565 NHP2Q9NX24 153 aaKnown RBP14.88□□□□□ -0.03
RBFOX1-206ENST00000535565 LOC107984156A0A0G2JMH3 177 aa14.86□□□□□ -0.03
RBFOX1-206ENST00000535565 RPL18AQ02543 176 aaKnown RBP14.86□□□□□ -0.03
RBFOX1-206ENST00000535565 ARL17AQ8IVW1 177 aa14.86□□□□□ -0.03
RBFOX1-206ENST00000535565 LOC107984640A0A0U1RRK4 108 aa14.85□□□□□ -0.03
RBFOX1-206ENST00000535565 RTL8CO15255 209 aa14.85□□□□□ -0.03
RBFOX1-206ENST00000535565 Q6ZRP5 223 aa14.85□□□□□ -0.03
RBFOX1-206ENST00000535565 GAGE2EQ4V326 116 aa14.84□□□□□ -0.03
RBFOX1-206ENST00000535565 COL5A1-AS1Q5SY13 56 aa14.84□□□□□ -0.03
RBFOX1-206ENST00000535565 GAGE2DQ9UEU5 116 aa14.84□□□□□ -0.03
RBFOX1-206ENST00000535565 TNP2Q05952 138 aa14.83□□□□□ -0.04
RBFOX1-206ENST00000535565 PKIGQ9Y2B9 76 aa14.83□□□□□ -0.04
RBFOX1-206ENST00000535565 XAGE1AQ9HD64 81 aa14.82□□□□□ -0.04
RBFOX1-206ENST00000535565 LBHQ53QV2 105 aaPredicted RBP14.81□□□□□ -0.04
RBFOX1-206ENST00000535565 C9orf163Q8N9P6 203 aa14.81□□□□□ -0.04
RBFOX1-206ENST00000535565 DNAH2Q9P225 4427 aa14.81□□□□□ -0.04
RBFOX1-206ENST00000535565 A0A1B0GWB2 263 aa14.81□□□□□ -0.04
RBFOX1-206ENST00000535565 CFC1BP0CG36 223 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms