RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 C11orf52Q96A22 123 aa4.51□□□□□ -1.69
CLIP1-206ENST00000535290 PLEKHB2Q96CS7 222 aa4.51□□□□□ -1.69
CLIP1-206ENST00000535290 TRBV20OR9-2A0A075B6H5 130 aa4.5□□□□□ -1.69
CLIP1-206ENST00000535290 GNG4P50150 75 aa4.5□□□□□ -1.69
CLIP1-206ENST00000535290 RPL39P62891 51 aaKnown RBP4.5□□□□□ -1.69
CLIP1-206ENST00000535290 CCL20P78556 96 aa4.5□□□□□ -1.69
CLIP1-206ENST00000535290 PNRC1Q12796 327 aaPredicted RBP4.5□□□□□ -1.69
CLIP1-206ENST00000535290 KIR2DL4Q99706 377 aa4.5□□□□□ -1.69
CLIP1-206ENST00000535290 TGIF2-C20orf24A0A0A6YYL0 155 aa4.49□□□□□ -1.69
CLIP1-206ENST00000535290 IFITM10A6NMD0 228 aa4.49□□□□□ -1.69
CLIP1-206ENST00000535290 SMKR1H3BMG3 65 aa4.49□□□□□ -1.69
CLIP1-206ENST00000535290 SPINK1P00995 79 aa4.49□□□□□ -1.69
CLIP1-206ENST00000535290 COX6B2Q6YFQ2 88 aa4.49□□□□□ -1.69
CLIP1-206ENST00000535290 FAM213BQ8TBF2 198 aa4.49□□□□□ -1.69
CLIP1-206ENST00000535290 SMIM12Q96EX1 92 aa4.49□□□□□ -1.69
CLIP1-206ENST00000535290 HBBP68871 147 aa4.48□□□□□ -1.69
CLIP1-206ENST00000535290 IFITM3Q01628 133 aa4.48□□□□□ -1.69
CLIP1-206ENST00000535290 NDUFA12Q9UI09 145 aa4.48□□□□□ -1.69
CLIP1-206ENST00000535290 IGKV2-28A0A075B6P5 120 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 SCO1O75880 301 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 IGKV2D-28P01615 120 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 RAB4AP20338 218 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 CKS1BP61024 79 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 MRPS36P82909 103 aaKnown RBP4.47□□□□□ -1.69
CLIP1-206ENST00000535290 FAM19A1Q7Z5A9 133 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 AMN1Q8IY45 258 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 Q8N377 158 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 NRACQ8N912 160 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 VCX2Q9H322 139 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 BIN3Q9NQY0 253 aa4.47□□□□□ -1.69
CLIP1-206ENST00000535290 FXYD6-FXYD2A0A087WZ82 144 aa4.46□□□□□ -1.7
CLIP1-206ENST00000535290 HSBP1L1C9JCN9 74 aa4.46□□□□□ -1.7
CLIP1-206ENST00000535290 TMEM238C9JI98 176 aa4.46□□□□□ -1.7
CLIP1-206ENST00000535290 SPANXA1Q9NS26 97 aa4.46□□□□□ -1.7
CLIP1-206ENST00000535290 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.7
CLIP1-206ENST00000535290 GNG13Q9P2W3 67 aa4.46□□□□□ -1.7
CLIP1-206ENST00000535290 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
CLIP1-206ENST00000535290 K7EN84 100 aa4.45□□□□□ -1.7
CLIP1-206ENST00000535290 PRSS2P07478 247 aa4.45□□□□□ -1.7
CLIP1-206ENST00000535290 CFC1P0CG37 223 aa4.45□□□□□ -1.7
CLIP1-206ENST00000535290 C6orf226Q5I0X4 101 aa4.45□□□□□ -1.7
CLIP1-206ENST00000535290 CBLN2Q8IUK8 224 aa4.45□□□□□ -1.7
CLIP1-206ENST00000535290 SPRR4Q96PI1 79 aa4.45□□□□□ -1.7
CLIP1-206ENST00000535290 TMEM191AQ9H0A3 160 aa4.45□□□□□ -1.7
CLIP1-206ENST00000535290 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
CLIP1-206ENST00000535290 LINC01561Q8N1V8 128 aa4.44□□□□□ -1.7
CLIP1-206ENST00000535290 FAM19A2Q8N3H0 131 aa4.44□□□□□ -1.7
CLIP1-206ENST00000535290 HIGD2AQ9BW72 106 aa4.44□□□□□ -1.7
CLIP1-206ENST00000535290 TMEM126AQ9H061 195 aa4.44□□□□□ -1.7
CLIP1-206ENST00000535290 SLC25A20O43772 301 aa4.43□□□□□ -1.7
CLIP1-206ENST00000535290 UBE2V1Q13404 147 aa4.43□□□□□ -1.7
CLIP1-206ENST00000535290 SLC7A5P1Q8MH63 180 aa4.43□□□□□ -1.7
CLIP1-206ENST00000535290 NKAPP1Q8N9T2 125 aa4.43□□□□□ -1.7
CLIP1-206ENST00000535290 OCC1Q8TAD7 63 aa4.43□□□□□ -1.7
CLIP1-206ENST00000535290 MANBALQ9NQG1 85 aa4.43□□□□□ -1.7
CLIP1-206ENST00000535290 MED9Q9NWA0 146 aa4.43□□□□□ -1.7
CLIP1-206ENST00000535290 UMAD1C9J7I0 102 aa4.42□□□□□ -1.7
CLIP1-206ENST00000535290 F8VRH5 84 aa4.42□□□□□ -1.7
CLIP1-206ENST00000535290 M0R378 163 aa4.42□□□□□ -1.7
CLIP1-206ENST00000535290 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
CLIP1-206ENST00000535290 Q6ZN92 141 aa4.42□□□□□ -1.7
CLIP1-206ENST00000535290 Q8IZM0 81 aa4.42□□□□□ -1.7
CLIP1-206ENST00000535290 ALKBH7Q9BT30 221 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-206ENST00000535290 GNB1LQ9BYB4 327 aa4.42□□□□□ -1.7
CLIP1-206ENST00000535290 PAM16Q9Y3D7 125 aa4.42□□□□□ -1.7
CLIP1-206ENST00000535290 A0A1B0GUT8 65 aa4.41□□□□□ -1.7
CLIP1-206ENST00000535290 C5orf52A6NGY3 159 aa4.41□□□□□ -1.7
CLIP1-206ENST00000535290 PPP1R17O96001 155 aa4.41□□□□□ -1.7
CLIP1-206ENST00000535290 GIPP09681 153 aaPredicted RBP4.41□□□□□ -1.7
CLIP1-206ENST00000535290 RPS29P62273 56 aaKnown RBP4.41□□□□□ -1.7
CLIP1-206ENST00000535290 ZC2HC1BQ5TFG8 222 aa4.41□□□□□ -1.7
CLIP1-206ENST00000535290 GAGE2AQ6NT46 116 aa4.41□□□□□ -1.7
CLIP1-206ENST00000535290 IGLV4-3A0A075B6K6 122 aa4.4□□□□□ -1.71
CLIP1-206ENST00000535290 C9orf92A6NGG3 77 aa4.4□□□□□ -1.71
CLIP1-206ENST00000535290 A8MWL6 223 aa4.4□□□□□ -1.71
CLIP1-206ENST00000535290 PPP1R2P9O14990 202 aa4.4□□□□□ -1.71
CLIP1-206ENST00000535290 ARPC5O15511 151 aa4.4□□□□□ -1.71
CLIP1-206ENST00000535290 GATCO43716 136 aaKnown RBP4.4□□□□□ -1.71
CLIP1-206ENST00000535290 PDE6DO43924 150 aa4.4□□□□□ -1.71
CLIP1-206ENST00000535290 BORCS7Q96B45 105 aa4.4□□□□□ -1.71
CLIP1-206ENST00000535290 HIGD1CA8MV81 97 aa4.39□□□□□ -1.71
CLIP1-206ENST00000535290 TCAPO15273 167 aa4.39□□□□□ -1.71
CLIP1-206ENST00000535290 S100ZQ8WXG8 99 aa4.39□□□□□ -1.71
CLIP1-206ENST00000535290 C20orf78Q9BR46 151 aa4.39□□□□□ -1.71
CLIP1-206ENST00000535290 NEBP20929 6669 aa4.38□□□□□ -1.71
CLIP1-206ENST00000535290 IFI27P40305 119 aaPredicted RBP4.38□□□□□ -1.71
CLIP1-206ENST00000535290 RAB5BP61020 215 aa4.38□□□□□ -1.71
CLIP1-206ENST00000535290 MRPL51Q4U2R6 128 aaKnown RBP4.38□□□□□ -1.71
CLIP1-206ENST00000535290 PAPPA-AS1Q5QFB9 102 aa4.38□□□□□ -1.71
CLIP1-206ENST00000535290 TMEM141Q96I45 108 aa4.38□□□□□ -1.71
CLIP1-206ENST00000535290 SMIM2Q9BVW6 85 aa4.38□□□□□ -1.71
CLIP1-206ENST00000535290 ZNF706Q9Y5V0 76 aaPredicted RBP4.38□□□□□ -1.71
CLIP1-206ENST00000535290 TRBV24-1A0A075B6N3 115 aa4.37□□□□□ -1.71
CLIP1-206ENST00000535290 MOBPQ13875 183 aa4.37□□□□□ -1.71
CLIP1-206ENST00000535290 TEX43Q6ZNM6 134 aa4.37□□□□□ -1.71
CLIP1-206ENST00000535290 LINC00299Q6ZSB3 139 aa4.37□□□□□ -1.71
CLIP1-206ENST00000535290 FAM231DQ6ZW35 169 aa4.37□□□□□ -1.71
CLIP1-206ENST00000535290 EIF5A2Q9GZV4 153 aaKnown RBP4.37□□□□□ -1.71
CLIP1-206ENST00000535290 PYGO1Q9Y3Y4 419 aa4.37□□□□□ -1.71
CLIP1-206ENST00000535290 FAM104BQ5XKR9 115 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms