RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
CCDC90B-219ENST00000534753 NDUFA1O15239 70 aa5.61□□□□□ -1.51
CCDC90B-219ENST00000534753 FABP9Q0Z7S8 132 aa5.61□□□□□ -1.51
CCDC90B-219ENST00000534753 LINC00242Q5T6M2 205 aa5.61□□□□□ -1.51
CCDC90B-219ENST00000534753 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.6□□□□□ -1.51
CCDC90B-219ENST00000534753 APOC3P02656 99 aa5.6□□□□□ -1.51
CCDC90B-219ENST00000534753 UBE2D1P51668 147 aa5.6□□□□□ -1.51
CCDC90B-219ENST00000534753 UNQ6190/PRO20217Q6UXQ8 127 aa5.6□□□□□ -1.51
CCDC90B-219ENST00000534753 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
CCDC90B-219ENST00000534753 GNB1LQ9BYB4 327 aa5.6□□□□□ -1.51
CCDC90B-219ENST00000534753 TOMM7Q9P0U1 55 aa5.6□□□□□ -1.51
CCDC90B-219ENST00000534753 A0A087WZ39 114 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 PRSS2P07478 247 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 G0S2P27469 103 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 RHEBQ15382 184 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 GAGE2EQ4V326 116 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 C2orf82Q6UX34 121 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 LINC00173Q6ZV60 143 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 FA2HQ7L5A8 372 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 ALKBH7Q9BT30 221 aaPredicted RBP5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 SMCO4Q9NRQ5 59 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 GAGE2DQ9UEU5 116 aa5.59□□□□□ -1.51
CCDC90B-219ENST00000534753 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 IGIPA6NJ69 53 aa5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 K7EMI3 77 aa5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 OXTP01178 125 aa5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 PRR3P79522 188 aaKnown RBP5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 C9orf116Q5BN46 136 aaPredicted RBP5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 C10orf91Q5T1B1 145 aa5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 TOMM6Q96B49 74 aa5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 AMELXQ99217 191 aa5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 GEMIN7Q9H840 131 aaKnown RBP5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 C6orf48Q9UBA6 75 aa5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 CARHSP1Q9Y2V2 147 aaKnown RBP5.58□□□□□ -1.52
CCDC90B-219ENST00000534753 HERC1Q15751 4861 aa5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 MT-ND6P03923 174 aa5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 CKS1BP61024 79 aa5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 NDUFA5Q16718 116 aa5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 COX19Q49B96 90 aa5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 C6orf226Q5I0X4 101 aa5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 PHF5AQ7RTV0 110 aaKnown RBP5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 FAM19A5Q7Z5A7 132 aaPredicted RBP5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 PACRGQ96M98 296 aaPredicted RBP5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 MRPL35Q9NZE8 188 aaKnown RBP5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 PAM16Q9Y3D7 125 aa5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 TRAPPC1Q9Y5R8 145 aa5.57□□□□□ -1.52
CCDC90B-219ENST00000534753 FAM168BA1KXE4 195 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 F8WDY8 70 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 SNAPINO95295 136 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 NDUFA6P56556 154 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 KIAA0087Q14695 138 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 Q6ZRP5 223 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 ERASQ7Z444 233 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 LINC00469Q8N7U9 141 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 PRR26Q8N8Z3 221 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 TIMM17AQ99595 171 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 CDKN2A-AS1Q9UH64 79 aa5.56□□□□□ -1.52
CCDC90B-219ENST00000534753 HERVK_113P63121 156 aa5.55□□□□□ -1.52
CCDC90B-219ENST00000534753 SEC11AP67812 179 aa5.55□□□□□ -1.52
CCDC90B-219ENST00000534753 SVBPQ8N300 66 aa5.55□□□□□ -1.52
CCDC90B-219ENST00000534753 PKHD1L1Q86WI1 4243 aa5.54□□□□□ -1.52
CCDC90B-219ENST00000534753 PMCHL1Q16048 86 aa5.54□□□□□ -1.52
CCDC90B-219ENST00000534753 TRBV30A0A0K0K1B3 111 aa5.53□□□□□ -1.52
CCDC90B-219ENST00000534753 SPINK8P0C7L1 97 aa5.53□□□□□ -1.52
CCDC90B-219ENST00000534753 C1orf137Q5JT78 98 aa5.53□□□□□ -1.52
CCDC90B-219ENST00000534753 LINC01561Q8N1V8 128 aa5.53□□□□□ -1.52
CCDC90B-219ENST00000534753 CST9LQ9H4G1 147 aa5.53□□□□□ -1.52
CCDC90B-219ENST00000534753 PSORS1C2Q9UIG4 136 aa5.53□□□□□ -1.52
CCDC90B-219ENST00000534753 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 TINCRA0A1B0GVN0 87 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 LINC01546A6NGU7 62 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 NDUFC2-KCTD14E9PQ53 114 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 LINC00614P0C842 121 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 UBE2BP63146 152 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 PMVKQ15126 192 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 FAM19A3Q7Z5A8 133 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 Q8IZM0 81 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 C18orf32Q8TCD1 76 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 XAGE1AQ9HD64 81 aa5.52□□□□□ -1.53
CCDC90B-219ENST00000534753 LINC01549A6NIU2 74 aa5.51□□□□□ -1.53
CCDC90B-219ENST00000534753 M0QXV9 152 aa5.51□□□□□ -1.53
CCDC90B-219ENST00000534753 TLX1NBP0CAT3 122 aa5.51□□□□□ -1.53
CCDC90B-219ENST00000534753 RAB5BP61020 215 aa5.51□□□□□ -1.53
CCDC90B-219ENST00000534753 SPINK6Q6UWN8 80 aa5.51□□□□□ -1.53
CCDC90B-219ENST00000534753 COX7B2Q8TF08 81 aa5.51□□□□□ -1.53
CCDC90B-219ENST00000534753 SMIM1B2RUZ4 78 aa5.5□□□□□ -1.53
CCDC90B-219ENST00000534753 F8VRH5 84 aa5.5□□□□□ -1.53
CCDC90B-219ENST00000534753 HBDP02042 147 aa5.5□□□□□ -1.53
CCDC90B-219ENST00000534753 UBE2V1Q13404 147 aa5.5□□□□□ -1.53
CCDC90B-219ENST00000534753 C9orf129Q5T035 196 aaKnown RBP5.5□□□□□ -1.53
CCDC90B-219ENST00000534753 REG3GQ6UW15 175 aa5.5□□□□□ -1.53
CCDC90B-219ENST00000534753 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
CCDC90B-219ENST00000534753 H3BRM9 83 aa5.49□□□□□ -1.53
CCDC90B-219ENST00000534753 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
CCDC90B-219ENST00000534753 SEC61BP60468 96 aaKnown RBP5.49□□□□□ -1.53
CCDC90B-219ENST00000534753 PDZD11Q5EBL8 140 aa5.49□□□□□ -1.53
CCDC90B-219ENST00000534753 KRTAP11-1Q8IUC1 163 aa5.49□□□□□ -1.53
CCDC90B-219ENST00000534753 CBLN2Q8IUK8 224 aa5.49□□□□□ -1.53
CCDC90B-219ENST00000534753 SLC7A5P1Q8MH63 180 aa5.49□□□□□ -1.53
CCDC90B-219ENST00000534753 A0A096LNJ9 63 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms