RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 NDUFA11Q86Y39 141 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 C1orf158Q8N1D5 194 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 C10orf126Q8N4M7 172 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 C5orf56Q8N8D9 126 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 Q8N8P6 123 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 Q8N9W7 124 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 FAM104AQ969W3 186 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 FXYD5Q96DB9 178 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 NABP2Q9BQ15 211 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 SHANK2-AS3Q9BTD1 123 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 CNFNQ9BYD5 112 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 TENM3Q9P273 2699 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 RYR3Q15413 4870 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 IGLV1-50A0A075B6I6 118 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 IGKV1OR2-108A0A075B7D4 117 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 IGHV3-72A0A0B4J1Y9 119 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 TRAV2A0A0B4J234 112 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 IGHV3-66A0A0C4DH42 116 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 TRBV10-2A0A0K0K1G8 114 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 PLAC8L1A1L4L8 177 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 LINC01549A6NIU2 74 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 H3BT86 120 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 COX7A2P2O60397 106 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 DPM2O94777 84 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 NDUFA3O95167 84 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 IGHV3-33P01772 117 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 IGKCP01834 107 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 IGHG2P01859 326 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 SAA2P0DJI9 122 aaPredicted RBP2.15□□□□□ -2.07
USP48-215ENST00000534705 CD28P10747 220 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 C9orf153Q5TBE3 101 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 ZNF833PQ6ZTB9 187 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 AMN1Q8IY45 258 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 TTTY13Q9BZ97 58 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 ENY2Q9NPA8 101 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 EPDR1Q9UM22 224 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.07
USP48-215ENST00000534705 DNAH1Q9P2D7 4330 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 RYR2Q92736 4967 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 A0A0B4J2C4 111 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 TRBV30A0A0K0K1B3 111 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 C8orf87E5RJ46 101 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 J3QQQ9 107 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 IGLV2-23P01705 113 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 ARMS2P0C7Q2 107 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 EMP1P54849 157 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 GNG5P63218 68 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 DAZ2Q13117 558 aaKnown RBP2.14□□□□□ -2.07
USP48-215ENST00000534705 MRPL51Q4U2R6 128 aaKnown RBP2.14□□□□□ -2.07
USP48-215ENST00000534705 RPL39P5Q59GN2 51 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 KPRPQ5T749 579 aaPredicted RBP2.14□□□□□ -2.07
USP48-215ENST00000534705 CEMP1Q6PRD7 247 aaPredicted RBP2.14□□□□□ -2.07
USP48-215ENST00000534705 PATE2Q6UY27 113 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 LINC00643Q86TS7 51 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 ORMDL3Q8N138 153 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 C20orf203Q8NBC4 194 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 OR8A1Q8NGG7 326 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 LINC00477Q96M19 166 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 AMELXQ99217 191 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 CYSTM1Q9H1C7 97 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 DAZ3Q9NR90 486 aaKnown RBP2.14□□□□□ -2.07
USP48-215ENST00000534705 TMEM14BQ9NUH8 114 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 LINC00527Q9UJ94 153 aa2.14□□□□□ -2.07
USP48-215ENST00000534705 KLK5Q9Y337 293 aaPredicted RBP2.14□□□□□ -2.07
USP48-215ENST00000534705 IGLV11-55A0A075B6I3 123 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 IGKV1D-37A0A075B6S9 117 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 TRAV8-1A0A0A6YYK1 113 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 A0A0J9YY99 117 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 FAM236AA0A1B0GUQ0 79 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 FAM236BA0A1B0GV22 79 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 F8VRH5 84 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 G3V318 75 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 K7EMI3 77 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 ATOX1O00244 68 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 INSP01308 110 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 IGHV3-11P01762 117 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 IGHV3-30P01768 117 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 IGKV1-16P04430 117 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 TCRAP04437 139 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 IGHV3-30-5P0DP03 117 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 PLNP26678 52 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 CRIP1P50238 77 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 MP68P56378 58 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 FAM222AQ5U5X8 452 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 HRCT1Q6UXD1 115 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 Q86TA4 180 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 LINC00337Q8N6G1 96 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 SLC25A29Q8N8R3 303 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 WFDC9Q8NEX5 89 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 DCANP1Q8TF63 244 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 TMEM263Q8WUH6 116 aaKnown RBP2.13□□□□□ -2.07
USP48-215ENST00000534705 NXT2Q9NPJ8 142 aaKnown RBP2.13□□□□□ -2.07
USP48-215ENST00000534705 KLK12Q9UKR0 248 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 DNAH6Q9C0G6 4158 aa2.13□□□□□ -2.07
USP48-215ENST00000534705 TRAV12-2A0A075B6T6 113 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 A0A0J9YX75 114 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 TEX49A0A1B0GTD5 131 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 D6R8Y8 96 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 E7EUB6 86 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms