RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
CSDE1-215ENST00000533818 ALKBH7Q9BT30 221 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-215ENST00000533818 F8VRH5 84 aa5.43□□□□□ -1.54
CSDE1-215ENST00000533818 EIF4EBP3O60516 100 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-215ENST00000533818 Q8IZM0 81 aa5.43□□□□□ -1.54
CSDE1-215ENST00000533818 SPANXA1Q9NS26 97 aa5.43□□□□□ -1.54
CSDE1-215ENST00000533818 Q6ZN92 141 aa5.42□□□□□ -1.54
CSDE1-215ENST00000533818 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
CSDE1-215ENST00000533818 H2AFB1P0C5Y9 115 aa5.41□□□□□ -1.54
CSDE1-215ENST00000533818 RPL7L1Q6DKI1 246 aaKnown RBP5.41□□□□□ -1.54
CSDE1-215ENST00000533818 NUDT10Q8NFP7 164 aa5.41□□□□□ -1.54
CSDE1-215ENST00000533818 NUDT11Q96G61 164 aa5.41□□□□□ -1.54
CSDE1-215ENST00000533818 NPSP0C0P6 89 aa5.4□□□□□ -1.54
CSDE1-215ENST00000533818 GNG4P50150 75 aa5.4□□□□□ -1.54
CSDE1-215ENST00000533818 SUMO2P61956 95 aaKnown RBP5.4□□□□□ -1.54
CSDE1-215ENST00000533818 TRBV20OR9-2A0A075B6H5 130 aa5.39□□□□□ -1.55
CSDE1-215ENST00000533818 BORCS7-ASMTA0A0B4J1R7 106 aa5.39□□□□□ -1.55
CSDE1-215ENST00000533818 A0A1B0GV50 99 aa5.39□□□□□ -1.55
CSDE1-215ENST00000533818 C20orf202A1L168 122 aa5.39□□□□□ -1.55
CSDE1-215ENST00000533818 LINC00483Q53H64 154 aa5.39□□□□□ -1.55
CSDE1-215ENST00000533818 FAM231DQ6ZW35 169 aa5.39□□□□□ -1.55
CSDE1-215ENST00000533818 SMKR1H3BMG3 65 aa5.38□□□□□ -1.55
CSDE1-215ENST00000533818 SSNA1O43805 119 aa5.38□□□□□ -1.55
CSDE1-215ENST00000533818 RAB4AP20338 218 aa5.38□□□□□ -1.55
CSDE1-215ENST00000533818 GAGE2AQ6NT46 116 aa5.38□□□□□ -1.55
CSDE1-215ENST00000533818 SMCR5Q8TEV8 140 aa5.38□□□□□ -1.55
CSDE1-215ENST00000533818 SFT2D1Q8WV19 159 aa5.38□□□□□ -1.55
CSDE1-215ENST00000533818 SMIM12Q96EX1 92 aa5.38□□□□□ -1.55
CSDE1-215ENST00000533818 TIMM17AQ99595 171 aa5.38□□□□□ -1.55
CSDE1-215ENST00000533818 BIN3Q9NQY0 253 aa5.38□□□□□ -1.55
CSDE1-215ENST00000533818 RAB5BP61020 215 aa5.37□□□□□ -1.55
CSDE1-215ENST00000533818 KCNRGQ8N5I3 272 aa5.37□□□□□ -1.55
CSDE1-215ENST00000533818 NRACQ8N912 160 aa5.37□□□□□ -1.55
CSDE1-215ENST00000533818 PPP1R17O96001 155 aa5.36□□□□□ -1.55
CSDE1-215ENST00000533818 CCL20P78556 96 aa5.36□□□□□ -1.55
CSDE1-215ENST00000533818 AKAP14Q86UN6 197 aa5.36□□□□□ -1.55
CSDE1-215ENST00000533818 C11orf52Q96A22 123 aa5.36□□□□□ -1.55
CSDE1-215ENST00000533818 TMEM191AQ9H0A3 160 aa5.36□□□□□ -1.55
CSDE1-215ENST00000533818 PPP1R2P9O14990 202 aa5.35□□□□□ -1.55
CSDE1-215ENST00000533818 VPREB1P12018 145 aa5.35□□□□□ -1.55
CSDE1-215ENST00000533818 CXCL5P42830 114 aa5.35□□□□□ -1.55
CSDE1-215ENST00000533818 AMN1Q8IY45 258 aa5.35□□□□□ -1.55
CSDE1-215ENST00000533818 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
CSDE1-215ENST00000533818 TCAPO15273 167 aa5.34□□□□□ -1.55
CSDE1-215ENST00000533818 LIMD2Q9BT23 127 aa5.34□□□□□ -1.55
CSDE1-215ENST00000533818 IFI27P40305 119 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-215ENST00000533818 MBD3L1Q8WWY6 194 aa5.33□□□□□ -1.56
CSDE1-215ENST00000533818 BORCS7Q96B45 105 aa5.33□□□□□ -1.56
CSDE1-215ENST00000533818 IGLV4-3A0A075B6K6 122 aa5.32□□□□□ -1.56
CSDE1-215ENST00000533818 TEX43Q6ZNM6 134 aa5.32□□□□□ -1.56
CSDE1-215ENST00000533818 FAM19A3Q7Z5A8 133 aa5.32□□□□□ -1.56
CSDE1-215ENST00000533818 ENKURQ8TC29 256 aa5.32□□□□□ -1.56
CSDE1-215ENST00000533818 TMEM141Q96I45 108 aa5.32□□□□□ -1.56
CSDE1-215ENST00000533818 RPL24P83731 157 aaKnown RBP5.31□□□□□ -1.56
CSDE1-215ENST00000533818 C9orf153Q5TBE3 101 aa5.31□□□□□ -1.56
CSDE1-215ENST00000533818 FAM213BQ8TBF2 198 aa5.31□□□□□ -1.56
CSDE1-215ENST00000533818 MED9Q9NWA0 146 aa5.31□□□□□ -1.56
CSDE1-215ENST00000533818 RAB14P61106 215 aa5.3□□□□□ -1.56
CSDE1-215ENST00000533818 ZC2HC1BQ5TFG8 222 aa5.3□□□□□ -1.56
CSDE1-215ENST00000533818 C20orf78Q9BR46 151 aa5.3□□□□□ -1.56
CSDE1-215ENST00000533818 C2orf88Q9BSF0 95 aa5.3□□□□□ -1.56
CSDE1-215ENST00000533818 EIF5A2Q9GZV4 153 aaKnown RBP5.3□□□□□ -1.56
CSDE1-215ENST00000533818 CHTOPQ9Y3Y2 248 aaKnown RBP5.3□□□□□ -1.56
CSDE1-215ENST00000533818 PYGO1Q9Y3Y4 419 aa5.3□□□□□ -1.56
CSDE1-215ENST00000533818 A0A1B0GUT8 65 aa5.29□□□□□ -1.56
CSDE1-215ENST00000533818 A8MWL6 223 aa5.29□□□□□ -1.56
CSDE1-215ENST00000533818 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
CSDE1-215ENST00000533818 HRCT1Q6UXD1 115 aa5.29□□□□□ -1.56
CSDE1-215ENST00000533818 CDKN2A-AS1Q9UH64 79 aa5.29□□□□□ -1.56
CSDE1-215ENST00000533818 GNG13Q9P2W3 67 aa5.28□□□□□ -1.56
CSDE1-215ENST00000533818 K7EN84 100 aa5.27□□□□□ -1.57
CSDE1-215ENST00000533818 GATCO43716 136 aaKnown RBP5.27□□□□□ -1.57
CSDE1-215ENST00000533818 GIPP09681 153 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-215ENST00000533818 KIAA1644Q3SXP7 199 aa5.27□□□□□ -1.57
CSDE1-215ENST00000533818 Q8NDZ9 215 aa5.27□□□□□ -1.57
CSDE1-215ENST00000533818 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
CSDE1-215ENST00000533818 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
CSDE1-215ENST00000533818 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
CSDE1-215ENST00000533818 SND1-IT1Q9HBX3 110 aa5.27□□□□□ -1.57
CSDE1-215ENST00000533818 MANBALQ9NQG1 85 aa5.27□□□□□ -1.57
CSDE1-215ENST00000533818 PFN2P35080 140 aa5.26□□□□□ -1.57
CSDE1-215ENST00000533818 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
CSDE1-215ENST00000533818 ATP11AUNQ6ZP68 121 aa5.26□□□□□ -1.57
CSDE1-215ENST00000533818 COX7B2Q8TF08 81 aa5.26□□□□□ -1.57
CSDE1-215ENST00000533818 SMIM2Q9BVW6 85 aa5.26□□□□□ -1.57
CSDE1-215ENST00000533818 VCX2Q9H322 139 aa5.26□□□□□ -1.57
CSDE1-215ENST00000533818 TRBV20-1A0A075B6N2 111 aa5.25□□□□□ -1.57
CSDE1-215ENST00000533818 TRBV24-1A0A075B6N3 115 aa5.25□□□□□ -1.57
CSDE1-215ENST00000533818 ETDCA0A1B0GVM5 59 aa5.25□□□□□ -1.57
CSDE1-215ENST00000533818 ERC2-IT1O76042 136 aa5.25□□□□□ -1.57
CSDE1-215ENST00000533818 HERVK_113P63121 156 aa5.25□□□□□ -1.57
CSDE1-215ENST00000533818 Q5BKY6 102 aa5.25□□□□□ -1.57
CSDE1-215ENST00000533818 OCC1Q8TAD7 63 aa5.25□□□□□ -1.57
CSDE1-215ENST00000533818 PRSS47A8MTI9 375 aa5.24□□□□□ -1.57
CSDE1-215ENST00000533818 PDE6DO43924 150 aa5.24□□□□□ -1.57
CSDE1-215ENST00000533818 MRPL51Q4U2R6 128 aaKnown RBP5.24□□□□□ -1.57
CSDE1-215ENST00000533818 C2orf66Q6UXQ4 117 aa5.24□□□□□ -1.57
CSDE1-215ENST00000533818 HIGD1CA8MV81 97 aa5.23□□□□□ -1.57
CSDE1-215ENST00000533818 UMAD1C9J7I0 102 aa5.23□□□□□ -1.57
CSDE1-215ENST00000533818 PRYO14603 147 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms