RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 LINC00208Q96KT6 92 aa7.67□□□□□ -1.18
COLCA1-203ENST00000532918 MDFIQ99750 246 aa7.67□□□□□ -1.18
COLCA1-203ENST00000532918 KRTAP24-1Q3LI83 254 aa7.67□□□□□ -1.18
COLCA1-203ENST00000532918 CELA1Q9UNI1 258 aa7.67□□□□□ -1.18
COLCA1-203ENST00000532918 KIAA1549Q9HCM3 1950 aa7.67□□□□□ -1.18
COLCA1-203ENST00000532918 CD164Q04900 197 aa7.66□□□□□ -1.18
COLCA1-203ENST00000532918 A0A1B0GUV1 79 aa7.66□□□□□ -1.18
COLCA1-203ENST00000532918 POM121L12Q8N7R1 296 aa7.66□□□□□ -1.18
COLCA1-203ENST00000532918 RAI1Q7Z5J4 1906 aaPredicted RBP7.66□□□□□ -1.18
COLCA1-203ENST00000532918 A8MZ25 164 aa7.66□□□□□ -1.18
COLCA1-203ENST00000532918 C1orf137Q5JT78 98 aa7.65□□□□□ -1.18
COLCA1-203ENST00000532918 UNQ6190/PRO20217Q6UXQ8 127 aa7.65□□□□□ -1.18
COLCA1-203ENST00000532918 C2orf91Q6ZV80 131 aa7.65□□□□□ -1.18
COLCA1-203ENST00000532918 LINC01556Q5JQF7 62 aa7.65□□□□□ -1.19
COLCA1-203ENST00000532918 LINC01561Q8N1V8 128 aa7.65□□□□□ -1.19
COLCA1-203ENST00000532918 LINC00242Q5T6M2 205 aa7.64□□□□□ -1.19
COLCA1-203ENST00000532918 A0A087WVE0 104 aa7.63□□□□□ -1.19
COLCA1-203ENST00000532918 Q6ZVQ6 151 aa7.63□□□□□ -1.19
COLCA1-203ENST00000532918 PIEZO2Q9H5I5 2752 aa7.63□□□□□ -1.19
COLCA1-203ENST00000532918 CIRBP-AS1Q8TBR5 109 aa7.62□□□□□ -1.19
COLCA1-203ENST00000532918 ESRGQ1W209 222 aa7.62□□□□□ -1.19
COLCA1-203ENST00000532918 WWC2-AS2Q96NR7 200 aa7.62□□□□□ -1.19
COLCA1-203ENST00000532918 DSCAML1Q8TD84 2053 aa7.62□□□□□ -1.19
COLCA1-203ENST00000532918 TLN1Q9Y490 2541 aaKnown RBP7.62□□□□□ -1.19
COLCA1-203ENST00000532918 COX8CQ7Z4L0 72 aa7.62□□□□□ -1.19
COLCA1-203ENST00000532918 IGIPA6NJ69 53 aa7.61□□□□□ -1.19
COLCA1-203ENST00000532918 NTM-AS1Q6ZSK4 140 aa7.61□□□□□ -1.19
COLCA1-203ENST00000532918 SMIM11BQ8TCY0 68 aa7.61□□□□□ -1.19
COLCA1-203ENST00000532918 LIMD2Q9BT23 127 aa7.61□□□□□ -1.19
COLCA1-203ENST00000532918 IGLV4-60A0A075B6I1 120 aa7.6□□□□□ -1.19
COLCA1-203ENST00000532918 COX6A2Q02221 97 aa7.6□□□□□ -1.19
COLCA1-203ENST00000532918 H3BNG1 76 aa7.6□□□□□ -1.19
COLCA1-203ENST00000532918 TMEM254Q8TBM7 123 aa7.6□□□□□ -1.19
COLCA1-203ENST00000532918 FAM229AH3BQW9 127 aa7.6□□□□□ -1.19
COLCA1-203ENST00000532918 SMIM1B2RUZ4 78 aa7.59□□□□□ -1.19
COLCA1-203ENST00000532918 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
COLCA1-203ENST00000532918 Q8N3U1 123 aa7.59□□□□□ -1.2
COLCA1-203ENST00000532918 ARHGAP32A7KAX9 2087 aa7.58□□□□□ -1.2
COLCA1-203ENST00000532918 COL4A2P08572 1712 aa7.57□□□□□ -1.2
COLCA1-203ENST00000532918 TRBV10-3A0A0K0K1G6 114 aa7.57□□□□□ -1.2
COLCA1-203ENST00000532918 CRYGAP11844 174 aa7.57□□□□□ -1.2
COLCA1-203ENST00000532918 ATG2AQ2TAZ0 1938 aa7.56□□□□□ -1.2
COLCA1-203ENST00000532918 JMJD1CQ15652 2540 aa7.56□□□□□ -1.2
COLCA1-203ENST00000532918 SBSPONQ8IVN8 264 aa7.56□□□□□ -1.2
COLCA1-203ENST00000532918 LINC00337Q8N6G1 96 aa7.55□□□□□ -1.2
COLCA1-203ENST00000532918 CPAMD8Q8IZJ3 1885 aa7.55□□□□□ -1.2
COLCA1-203ENST00000532918 HCFC1P51610 2035 aa7.55□□□□□ -1.2
COLCA1-203ENST00000532918 AMELXQ99217 191 aa7.55□□□□□ -1.2
COLCA1-203ENST00000532918 PCOTHQ58A44 107 aa7.55□□□□□ -1.2
COLCA1-203ENST00000532918 C9orf116Q5BN46 136 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-203ENST00000532918 hDV103S1A0JD37 113 aa7.55□□□□□ -1.2
COLCA1-203ENST00000532918 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
COLCA1-203ENST00000532918 Q9BRP9 147 aa7.54□□□□□ -1.2
COLCA1-203ENST00000532918 CHD8Q9HCK8 2581 aa7.54□□□□□ -1.2
COLCA1-203ENST00000532918 GAS8-AS1O95177 125 aa7.54□□□□□ -1.2
COLCA1-203ENST00000532918 PLXNB1O43157 2135 aa7.54□□□□□ -1.2
COLCA1-203ENST00000532918 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
COLCA1-203ENST00000532918 MYO9AB2RTY4 2548 aa7.53□□□□□ -1.2
COLCA1-203ENST00000532918 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
COLCA1-203ENST00000532918 H0Y9P7 68 aa7.52□□□□□ -1.2
COLCA1-203ENST00000532918 LRRK2Q5S007 2527 aa7.52□□□□□ -1.21
COLCA1-203ENST00000532918 SPATA3Q8NHX4 192 aa7.52□□□□□ -1.21
COLCA1-203ENST00000532918 C8orf87E5RJ46 101 aa7.52□□□□□ -1.21
COLCA1-203ENST00000532918 ZFYVE26Q68DK2 2539 aa7.52□□□□□ -1.21
COLCA1-203ENST00000532918 C11orf72Q8NBR9 251 aa7.52□□□□□ -1.21
COLCA1-203ENST00000532918 TET2Q6N021 2002 aaPredicted RBP7.52□□□□□ -1.21
COLCA1-203ENST00000532918 Q6ZRU5 148 aa7.51□□□□□ -1.21
COLCA1-203ENST00000532918 Q6ZSN1 163 aa7.51□□□□□ -1.21
COLCA1-203ENST00000532918 Q8N814 137 aa7.51□□□□□ -1.21
COLCA1-203ENST00000532918 TANC2Q9HCD6 1990 aa7.51□□□□□ -1.21
COLCA1-203ENST00000532918 NBDYA0A0U1RRE5 68 aa7.51□□□□□ -1.21
COLCA1-203ENST00000532918 SPINT4Q6UDR6 99 aa7.51□□□□□ -1.21
COLCA1-203ENST00000532918 X6R8D5 127 aa7.51□□□□□ -1.21
COLCA1-203ENST00000532918 C16orf90A8MZG2 172 aa7.5□□□□□ -1.21
COLCA1-203ENST00000532918 SPINK1P00995 79 aa7.5□□□□□ -1.21
COLCA1-203ENST00000532918 EXPH5Q8NEV8 1989 aa7.5□□□□□ -1.21
COLCA1-203ENST00000532918 ABCA12Q86UK0 2595 aa7.49□□□□□ -1.21
COLCA1-203ENST00000532918 EIF4EBP3O60516 100 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-203ENST00000532918 DOPEY1Q5JWR5 2465 aa7.49□□□□□ -1.21
COLCA1-203ENST00000532918 C22orf24Q9Y442 160 aa7.48□□□□□ -1.21
COLCA1-203ENST00000532918 PLA2G1BP04054 148 aaKnown RBP7.48□□□□□ -1.21
COLCA1-203ENST00000532918 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
COLCA1-203ENST00000532918 A0A1B0GU69 56 aa7.48□□□□□ -1.21
COLCA1-203ENST00000532918 KIF25-AS1Q9Y6Z4 181 aa7.47□□□□□ -1.21
COLCA1-203ENST00000532918 ZNF462Q96JM2 2506 aa7.46□□□□□ -1.21
COLCA1-203ENST00000532918 ANKRD11Q6UB99 2663 aaPredicted RBP7.46□□□□□ -1.22
COLCA1-203ENST00000532918 LINC00315P59091 139 aa7.46□□□□□ -1.22
COLCA1-203ENST00000532918 RTL8CO15255 209 aa7.46□□□□□ -1.22
COLCA1-203ENST00000532918 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
COLCA1-203ENST00000532918 EML5Q05BV3 1969 aa7.45□□□□□ -1.22
COLCA1-203ENST00000532918 LINC00575Q6W349 94 aa7.45□□□□□ -1.22
COLCA1-203ENST00000532918 CDIP1Q9H305 208 aa7.45□□□□□ -1.22
COLCA1-203ENST00000532918 Q6ZRP5 223 aa7.44□□□□□ -1.22
COLCA1-203ENST00000532918 A0A087WYN8 130 aa7.44□□□□□ -1.22
COLCA1-203ENST00000532918 HCG22E2RYF7 251 aa7.44□□□□□ -1.22
COLCA1-203ENST00000532918 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
COLCA1-203ENST00000532918 FAM19A4Q96LR4 140 aa7.44□□□□□ -1.22
COLCA1-203ENST00000532918 LINC00846Q9NV44 126 aa7.44□□□□□ -1.22
COLCA1-203ENST00000532918 C2CD3Q4AC94 2353 aa7.43□□□□□ -1.22
COLCA1-203ENST00000532918 C1orf64Q8NEQ6 169 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms