RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 A0A1B0GWB2 263 aa7.89□□□□□ -1.15
TRAF3IP2-212ENST00000532708 FUSP35637 526 aaKnown RBP eCLIP7.89□□□□□ -1.15
TRAF3IP2-212ENST00000532708 H3BMG7 143 aa7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 ETDBQ3ZM63 59 aa7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 CHCHD10Q8WYQ3 142 aaPredicted RBP7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 PGPEP1Q9NXJ5 209 aa7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 TRAV13-1A0A0B4J241 112 aa7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 KRTAP10-2P60368 255 aa7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 FOXI1Q12951 378 aa7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 TOMM6Q96B49 74 aa7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 PYGO1Q9Y3Y4 419 aa7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
TRAF3IP2-212ENST00000532708 IGLV4-3A0A075B6K6 122 aa7.87□□□□□ -1.15
TRAF3IP2-212ENST00000532708 ATP5LO75964 103 aa7.87□□□□□ -1.15
TRAF3IP2-212ENST00000532708 SPINK8P0C7L1 97 aa7.87□□□□□ -1.15
TRAF3IP2-212ENST00000532708 XCL1P47992 114 aa7.87□□□□□ -1.15
TRAF3IP2-212ENST00000532708 MRPS36P82909 103 aaKnown RBP7.87□□□□□ -1.15
TRAF3IP2-212ENST00000532708 ZC2HC1BQ5TFG8 222 aa7.87□□□□□ -1.15
TRAF3IP2-212ENST00000532708 NHP2Q9NX24 153 aaKnown RBP7.87□□□□□ -1.15
TRAF3IP2-212ENST00000532708 IGIPA6NJ69 53 aa7.86□□□□□ -1.15
TRAF3IP2-212ENST00000532708 APOMO95445 188 aa7.86□□□□□ -1.15
TRAF3IP2-212ENST00000532708 SS18Q15532 418 aa7.86□□□□□ -1.15
TRAF3IP2-212ENST00000532708 CDIP1Q9H305 208 aa7.86□□□□□ -1.15
TRAF3IP2-212ENST00000532708 ODF1Q14990 250 aa7.86□□□□□ -1.15
TRAF3IP2-212ENST00000532708 TMEM141Q96I45 108 aa7.86□□□□□ -1.15
TRAF3IP2-212ENST00000532708 IGKCP01834 107 aa7.85□□□□□ -1.15
TRAF3IP2-212ENST00000532708 Q8N814 137 aa7.85□□□□□ -1.15
TRAF3IP2-212ENST00000532708 SCGB3A1Q96QR1 104 aa7.85□□□□□ -1.15
TRAF3IP2-212ENST00000532708 USP17L23D6RBM5 183 aa7.84□□□□□ -1.15
TRAF3IP2-212ENST00000532708 DPM2O94777 84 aa7.84□□□□□ -1.15
TRAF3IP2-212ENST00000532708 LYRM7Q5U5X0 104 aa7.84□□□□□ -1.15
TRAF3IP2-212ENST00000532708 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.84□□□□□ -1.15
TRAF3IP2-212ENST00000532708 K7ERJ3 54 aa7.84□□□□□ -1.15
TRAF3IP2-212ENST00000532708 PPDPFLQ8WWR9 84 aa7.83□□□□□ -1.16
TRAF3IP2-212ENST00000532708 TIMM17AQ99595 171 aa7.83□□□□□ -1.16
TRAF3IP2-212ENST00000532708 IGKV2D-26A0A0A0MRZ7 120 aa7.82□□□□□ -1.16
TRAF3IP2-212ENST00000532708 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
TRAF3IP2-212ENST00000532708 AMELXQ99217 191 aa7.82□□□□□ -1.16
TRAF3IP2-212ENST00000532708 M0QXV9 152 aa7.81□□□□□ -1.16
TRAF3IP2-212ENST00000532708 ANAPC13Q9BS18 74 aa7.81□□□□□ -1.16
TRAF3IP2-212ENST00000532708 LINC01549A6NIU2 74 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 C16orf90A8MZG2 172 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 PRSS1P07477 247 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 UBE2D1P51668 147 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 C5orf38Q86SI9 138 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 C15orf56Q8N910 161 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 DNAH5Q8TE73 4624 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 MT-ATP8P03928 68 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 COX6A2Q02221 97 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 PAPPA-AS1Q5QFB9 102 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 LINC00242Q5T6M2 205 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 TEN1Q86WV5 123 aa7.8□□□□□ -1.16
TRAF3IP2-212ENST00000532708 IGLV5-52A0A0A0MRZ9 124 aa7.79□□□□□ -1.16
TRAF3IP2-212ENST00000532708 PLNP26678 52 aa7.79□□□□□ -1.16
TRAF3IP2-212ENST00000532708 XGP55808 180 aa7.79□□□□□ -1.16
TRAF3IP2-212ENST00000532708 HIGD2BQ4VC39 106 aa7.79□□□□□ -1.16
TRAF3IP2-212ENST00000532708 C14orf177Q52M58 125 aa7.79□□□□□ -1.16
TRAF3IP2-212ENST00000532708 TRBV20-1A0A075B6N2 111 aa7.79□□□□□ -1.16
TRAF3IP2-212ENST00000532708 COX7A2LO14548 114 aa7.79□□□□□ -1.16
TRAF3IP2-212ENST00000532708 HIST1H4GQ99525 98 aa7.79□□□□□ -1.16
TRAF3IP2-212ENST00000532708 DYNC1H1Q14204 4646 aaKnown RBP7.78□□□□□ -1.16
TRAF3IP2-212ENST00000532708 IGHV3OR16-9A0A0B4J2B5 98 aa7.78□□□□□ -1.16
TRAF3IP2-212ENST00000532708 MALP21145 153 aa7.78□□□□□ -1.16
TRAF3IP2-212ENST00000532708 LINC01620Q4KN68 170 aa7.78□□□□□ -1.16
TRAF3IP2-212ENST00000532708 Q6Q795 121 aa7.78□□□□□ -1.16
TRAF3IP2-212ENST00000532708 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
TRAF3IP2-212ENST00000532708 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
TRAF3IP2-212ENST00000532708 LINC00526Q96FQ7 95 aa7.77□□□□□ -1.17
TRAF3IP2-212ENST00000532708 TRAV12-1A0A0B4J245 112 aa7.77□□□□□ -1.17
TRAF3IP2-212ENST00000532708 A0A0J9YXV3 536 aa7.77□□□□□ -1.17
TRAF3IP2-212ENST00000532708 PMVKQ15126 192 aa7.77□□□□□ -1.17
TRAF3IP2-212ENST00000532708 SS18L2Q9UHA2 77 aa7.77□□□□□ -1.17
TRAF3IP2-212ENST00000532708 IGHV1-58A0A0C4DH39 117 aa7.76□□□□□ -1.17
TRAF3IP2-212ENST00000532708 SLPIP03973 132 aa7.76□□□□□ -1.17
TRAF3IP2-212ENST00000532708 LRP1BQ9NZR2 4599 aa7.75□□□□□ -1.17
TRAF3IP2-212ENST00000532708 MYMXA0A1B0GTQ4 84 aa7.75□□□□□ -1.17
TRAF3IP2-212ENST00000532708 GVQW2A0A096LPI5 108 aaPredicted RBP7.75□□□□□ -1.17
TRAF3IP2-212ENST00000532708 KRTAP10-1P60331 282 aa7.75□□□□□ -1.17
TRAF3IP2-212ENST00000532708 FAM19A3Q7Z5A8 133 aa7.75□□□□□ -1.17
TRAF3IP2-212ENST00000532708 TTTY13Q9BZ97 58 aa7.75□□□□□ -1.17
TRAF3IP2-212ENST00000532708 BIRC6Q9NR09 4857 aa7.75□□□□□ -1.17
TRAF3IP2-212ENST00000532708 A0A087WZ39 114 aa7.74□□□□□ -1.17
TRAF3IP2-212ENST00000532708 CDKN2A-AS1Q9UH64 79 aa7.74□□□□□ -1.17
TRAF3IP2-212ENST00000532708 HERVK_113P63121 156 aa7.73□□□□□ -1.17
TRAF3IP2-212ENST00000532708 CARD19Q96LW7 228 aa7.73□□□□□ -1.17
TRAF3IP2-212ENST00000532708 LINC01600Q96MT4 127 aa7.73□□□□□ -1.17
TRAF3IP2-212ENST00000532708 MRPL35Q9NZE8 188 aaKnown RBP7.73□□□□□ -1.17
TRAF3IP2-212ENST00000532708 F8VRH5 84 aa7.73□□□□□ -1.17
TRAF3IP2-212ENST00000532708 ZNF561-AS1K7EIQ3 104 aa7.73□□□□□ -1.17
TRAF3IP2-212ENST00000532708 IGLV4-69A0A075B6H9 119 aa7.72□□□□□ -1.17
TRAF3IP2-212ENST00000532708 IGHV3-64A0A075B6Q5 118 aa7.72□□□□□ -1.17
TRAF3IP2-212ENST00000532708 TINCRA0A1B0GVN0 87 aa7.72□□□□□ -1.17
TRAF3IP2-212ENST00000532708 B5MCH6 92 aa7.71□□□□□ -1.17
TRAF3IP2-212ENST00000532708 NDUFV3P56181 108 aaKnown RBP7.71□□□□□ -1.17
TRAF3IP2-212ENST00000532708 CNBPP62633 177 aaKnown RBP7.71□□□□□ -1.17
TRAF3IP2-212ENST00000532708 SPAG11BQ08648 103 aa7.71□□□□□ -1.17
TRAF3IP2-212ENST00000532708 GAGE2BQ13066 116 aa7.71□□□□□ -1.17
TRAF3IP2-212ENST00000532708 GAGE2EQ4V326 116 aa7.71□□□□□ -1.17
TRAF3IP2-212ENST00000532708 GAGE2DQ9UEU5 116 aa7.71□□□□□ -1.17
TRAF3IP2-212ENST00000532708 C9orf163Q8N9P6 203 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms